| Type |
Details |
Score |
| Allele |
| Name: |
PAN3 poly(A) specific ribonuclease subunit; gene trap OST359374, Lexicon Genetics |
| Allele Type: |
Gene trapped |
|
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
mutant stock, gene trap |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
mutant stock, gene trap |
|
•
•
•
•
•
|
| Allele |
| Name: |
PAN3 poly(A) specific ribonuclease subunit; gene trap A045F04, German Gene Trap Consortium |
| Allele Type: |
Gene trapped |
|
|
•
•
•
•
•
|
| Allele |
| Name: |
PAN3 poly(A) specific ribonuclease subunit; gene trap IST14631F4, Texas A&M Institute for Genomic Medicine |
| Allele Type: |
Gene trapped |
|
|
•
•
•
•
•
|
| Allele |
| Name: |
PAN3 poly(A) specific ribonuclease subunit; gene trap IST15091A10, Texas A&M Institute for Genomic Medicine |
| Allele Type: |
Gene trapped |
|
|
•
•
•
•
•
|
| Allele |
| Name: |
PAN3 poly(A) specific ribonuclease subunit; endonuclease-mediated mutation 1, The Centre for Phenogenomics |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, targeted mutation |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Pan3/Pan3 |
| Background: |
C57BL/6N-Pan3/Tcp |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Pan3/Pan3<+> |
| Background: |
C57BL/6N-Pan3/Tcp |
| Zygosity: |
ht |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Liu J |
| Year: |
2020 |
| Journal: |
Cell Rep |
| Title: |
YTHDF2/3 Are Required for Somatic Reprogramming through Different RNA Deadenylation Pathways. |
| Volume: |
32 |
| Issue: |
10 |
| Pages: |
108120 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhu P |
| Year: |
2019 |
| Journal: |
Nat Immunol |
| Title: |
IL-13 secreted by ILC2s promotes the self-renewal of intestinal stem cells through circular RNA circPan3. |
| Volume: |
20 |
| Issue: |
2 |
| Pages: |
183-194 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Schäfer IB |
| Year: |
2014 |
| Journal: |
Nat Struct Mol Biol |
| Title: |
The structure of the Pan2-Pan3 core complex reveals cross-talk between deadenylase and pseudokinase. |
| Volume: |
21 |
| Issue: |
7 |
| Pages: |
591-8 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
The poly(A)-specific nuclease (PAN) is a deadenylating enzyme involved in cytoplasmic mRNA turnover and consists of two subunits, PAN2 and PAN3, which form a conserved complex acting in the initial trimming of poly(A) tails, a process followed by the processive action of CCR4-NOT complex. PAN2 is the catalytic subunit and has two independent structural units, the N-terminal assembly unit which engages in a bipartite interaction with PAN3 dimers and the C-terminal catalytic unit [, , ]. The C-terminal unit contains the ubiquitin C-terminal hydrolase (UCH) domain, represented in this entry, and a RNase domain of the DEDD superfamily () [, ]. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Pan2 is a catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of the two eukaryotic poly(A) nuclease complexes (Ccr4-Caf1 and Pan2-Pan3) involved in mRNA decay [, ]. Pan2 is involved in the initial stage of deadenylation of mRNA, which is required for poly(A) tail shortening []. Regulation of mRNA decay rates in eukaryotic cells affects gene expression []. The Pan2-Pan3 complex shortens cytoplasmic mRNA 3' polyA tails to regulate mRNA stability []. In the complex Pan2 provides the catalytic activity, whereas Pan3 mediates Pan2 recruitment tomRNA targets []. |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1200
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
424
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gerhard DS |
| Year: |
2004 |
| Journal: |
Genome Res |
| Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
| Volume: |
14 |
| Issue: |
10B |
| Pages: |
2121-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Huttlin EL |
| Year: |
2010 |
| Journal: |
Cell |
| Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
| Volume: |
143 |
| Issue: |
7 |
| Pages: |
1174-89 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Church DM |
| Year: |
2009 |
| Journal: |
PLoS Biol |
| Title: |
Lineage-specific biology revealed by a finished genome assembly of the mouse. |
| Volume: |
7 |
| Issue: |
5 |
| Pages: |
e1000112 |
|
•
•
•
•
•
|