Type |
Details |
Score |
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
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•
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
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Title: |
Annotation inferences using phylogenetic trees |
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Allele |
Name: |
peroxisomal biogenesis factor 7; endonuclease-mediated mutation 2, Cathy Lutz |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Conditional ready |
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GO Term |
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Allele |
Name: |
peroxisomal biogenesis factor 7; targeted mutation 1, Ronald JA Wanders |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout, Reporter |
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Allele |
Name: |
peroxisomal biogenesis factor 7; targeted mutation 1, Nancy Braverman |
Allele Type: |
Targeted |
Attribute String: |
Hypomorph |
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Genotype |
Symbol: |
Pex7/Pex7 |
Background: |
Swiss |
Zygosity: |
hm |
Has Mutant Allele: |
true |
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•
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Genotype |
Symbol: |
Pex7/Pex7 |
Background: |
involves: 129S/SvEv * C57BL/6 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
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DO Term |
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DO Term |
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Ontology Term |
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Publication |
First Author: |
Bankston JR |
Year: |
2012 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Structure and stoichiometry of an accessory subunit TRIP8b interaction with hyperpolarization-activated cyclic nucleotide-gated channels. |
Volume: |
109 |
Issue: |
20 |
Pages: |
7899-904 |
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•
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•
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Publication |
First Author: |
Han Y |
Year: |
2020 |
Journal: |
Channels (Austin) |
Title: |
The structure and function of TRIP8b, an auxiliary subunit of hyperpolarization-activated cyclic-nucleotide gated channels. |
Volume: |
14 |
Issue: |
1 |
Pages: |
110-122 |
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Protein Domain |
Type: |
Family |
Description: |
Peroxisomal proteins catalyse metabolic reactions. The import of proteins from the cytosol into the peroxisomes matrix depends on more than a dozen peroxin (PEX) proteins, among which PEX5 and PEX7 serve as receptors that shuttle proteins bearing one of two peroxisome-targeting signals (PTSs) into the organelle. PEX5 is the PTS1 receptor, while PEX7 is the PTS2 receptor. In plants, PEX7 depends on PEX5 binding to deliver PTS2 cargo into the peroxisome, and PEX7 also facilitates PEX5 accumulation and import of PTS1 cargo into peroxisomes [, ]. This entry include PEX5 (also known as PTS1R) from animals, fungi and plants. This entry also includes PEX5L from vertebrates. PEX5 binds to the C-terminal PTS1-type tripeptide peroxisomal targeting signal (SKL-type) and plays an essential role in peroxisomal protein import [, , ]. Based on subcellular localization and binding properties mammalian PEX5 may function as a regulator in an early step of the PTS1 protein import process []. PEX5L acts as an accessory subunit of hyperpolarization-activated cyclic nucleotide-gated (HCN) channels, regulating their cell-surface expression and cyclic nucleotide dependence [, ]. Interestingly, although PEX5 and PEX5L have structurally similar binding at their TPR domains, they bind to different substrates in vivo []. |
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Publication |
First Author: |
Ito R |
Year: |
2001 |
Journal: |
Biochem Biophys Res Commun |
Title: |
Temperature-sensitive phenotype of Chinese hamster ovary cells defective in PEX5 gene. |
Volume: |
288 |
Issue: |
2 |
Pages: |
321-7 |
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•
•
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•
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Publication |
First Author: |
Ito R |
Year: |
2005 |
Journal: |
J Biochem |
Title: |
Identification of Pex5pM, and retarded maturation of 3-ketoacyl-CoA thiolase and acyl-CoA oxidase in CHO cells expressing mutant Pex5p isoforms. |
Volume: |
138 |
Issue: |
6 |
Pages: |
781-90 |
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•
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Publication |
First Author: |
Otera H |
Year: |
2002 |
Journal: |
Mol Cell Biol |
Title: |
Peroxisomal targeting signal receptor Pex5p interacts with cargoes and import machinery components in a spatiotemporally differentiated manner: conserved Pex5p WXXXF/Y motifs are critical for matrix protein import. |
Volume: |
22 |
Issue: |
6 |
Pages: |
1639-55 |
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•
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Publication |
First Author: |
Amery L |
Year: |
2001 |
Journal: |
Biochem J |
Title: |
Identification of PEX5p-related novel peroxisome-targeting signal 1 (PTS1)-binding proteins in mammals. |
Volume: |
357 |
Issue: |
Pt 3 |
Pages: |
635-46 |
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Publication |
First Author: |
Williams C |
Year: |
2006 |
Journal: |
Biochim Biophys Acta |
Title: |
Pex13p: docking or cargo handling protein? |
Volume: |
1763 |
Issue: |
12 |
Pages: |
1585-91 |
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Publication |
First Author: |
Stein K |
Year: |
2002 |
Journal: |
Mol Cell Biol |
Title: |
Interactions of Pex7p and Pex18p/Pex21p with the peroxisomal docking machinery: implications for the first steps in PTS2 protein import. |
Volume: |
22 |
Issue: |
17 |
Pages: |
6056-69 |
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Protein Domain |
Type: |
Family |
Description: |
Peroxin-13 (Pex13), located in the peroxisomal membrane, is a component of the peroxisomal translocation machinery with peroxin-14 and peroxin-17. Both termini of peroxin-13 are oriented to the cytosol. It is required for peroxisomal association of peroxin-14 []. Both human and budding yeast Pex13 bind to the PTS1 signal recognition factor Pex5. However, they bind to Pex5 through different binding sites []. In budding yeasts, Pex13 is also involved in the PTS2 signal recognition through its interaction with Pex7 []. |
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Publication |
First Author: |
El Magraoui F |
Year: |
2014 |
Journal: |
PLoS One |
Title: |
The cytosolic domain of Pex22p stimulates the Pex4p-dependent ubiquitination of the PTS1-receptor. |
Volume: |
9 |
Issue: |
8 |
Pages: |
e105894 |
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Publication |
First Author: |
Zolman BK |
Year: |
2005 |
Journal: |
Plant Cell |
Title: |
Identification and functional characterization of Arabidopsis PEROXIN4 and the interacting protein PEROXIN22. |
Volume: |
17 |
Issue: |
12 |
Pages: |
3422-35 |
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•
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Protein Domain |
Type: |
Family |
Description: |
Peroxisomal proteins, called peroxins, participate in the process of peroxisome assembly. Specific amino acid sequences (PTS or peroxisomal targeting signal) at the C terminus (PTS1) or N terminus (PTS2) are present in peroxisomal matrix proteins, which signals them to be imported. The protein receptors Pex5 and Pex7 accompany their cargoes (containing a PTS1 or a PTS2 amino acid sequence, respectively) into the peroxisome. Ubiquitination appears to be crucial for the export of Pex5 from the peroxisome to the cytosol. The monoubiquitination of the PTS1-receptor Pex5p is catalyzed by the E2 enzyme Pex4.Pex22 anchors Pex4 to the peroxisome membrane [, ]. Moreover, Pex4 requires the interaction with Pex22 to display full activity []. The N-terminal portion of Pex22 has a membrane anchoring function, whereas the C-terminal domain harbours its biological activity. The soluble C-terminal domain of Pex22 is essential for peroxisomal biogenesis and efficient monoubiquitination of the import receptor Pex5 []. |
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•
•
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•
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Publication |
First Author: |
Mizuno Y |
Year: |
2008 |
Journal: |
BMC Bioinformatics |
Title: |
Predicted mouse peroxisome-targeted proteins and their actual subcellular locations. |
Volume: |
9 Suppl 12 |
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Pages: |
S16 |
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•
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•
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Publication |
First Author: |
Ofman R |
Year: |
1998 |
Journal: |
Hum Mol Genet |
Title: |
Acyl-CoA:dihydroxyacetonephosphate acyltransferase: cloning of the human cDNA and resolution of the molecular basis in rhizomelic chondrodysplasia punctata type 2. |
Volume: |
7 |
Issue: |
5 |
Pages: |
847-53 |
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•
•
•
•
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Publication |
First Author: |
Terradillos O |
Year: |
1997 |
Journal: |
Oncogene |
Title: |
The hepatitis B virus X gene potentiates c-myc-induced liver oncogenesis in transgenic mice. |
Volume: |
14 |
Issue: |
4 |
Pages: |
395-404 |
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•
•
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•
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Publication |
First Author: |
Miyata N |
Year: |
2009 |
Journal: |
Biochim Biophys Acta |
Title: |
In vitro import of peroxisome-targeting signal type 2 (PTS2) receptor Pex7p into peroxisomes. |
Volume: |
1793 |
Issue: |
5 |
Pages: |
860-70 |
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•
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•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
567
 |
Fragment?: |
false |
|
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
639
 |
Fragment?: |
false |
|
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•
•
•
•
|
Publication |
First Author: |
Andrée B |
Year: |
2000 |
Journal: |
Dev Biol |
Title: |
Isolation and characterization of the novel popeye gene family expressed in skeletal muscle and heart. |
Volume: |
223 |
Issue: |
2 |
Pages: |
371-82 |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
626
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
650
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
615
 |
Fragment?: |
false |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
567
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
648
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
591
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
590
 |
Fragment?: |
false |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
632
 |
Fragment?: |
false |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
344
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
602
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
625
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
591
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Koller A |
Year: |
1999 |
Journal: |
J Cell Biol |
Title: |
Pex22p of Pichia pastoris, essential for peroxisomal matrix protein import, anchors the ubiquitin-conjugating enzyme, Pex4p, on the peroxisomal membrane. |
Volume: |
146 |
Issue: |
1 |
Pages: |
99-112 |
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•
•
•
•
•
|
Publication |
First Author: |
Williams C |
Year: |
2012 |
Journal: |
EMBO J |
Title: |
Insights into ubiquitin-conjugating enzyme/ co-activator interactions from the structure of the Pex4p:Pex22p complex. |
Volume: |
31 |
Issue: |
2 |
Pages: |
391-402 |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
405
 |
Fragment?: |
false |
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•
•
•
•
|