| Type |
Details |
Score |
| GXD Expression |
| Probe: |
MGI:6888151 |
| Assay Type: |
Western blot |
| Annotation Date: |
2022-03-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1716828 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:6888156 |
| Age: |
postnatal day 5 |
| Image: |
1 |
|
| Specimen Label: |
Retina |
| Detected: |
true |
| Specimen Num: |
21 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6888151 |
| Assay Type: |
Western blot |
| Annotation Date: |
2022-03-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1716828 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:6888156 |
| Age: |
postnatal month 1 |
| Image: |
1 |
|
| Specimen Label: |
Retina |
| Detected: |
true |
| Specimen Num: |
22 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6888151 |
| Assay Type: |
Western blot |
| Annotation Date: |
2022-03-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1716828 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:6888156 |
| Age: |
postnatal month 4 |
| Image: |
1 |
|
| Specimen Label: |
Retina |
| Detected: |
true |
| Specimen Num: |
23 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6888151 |
| Assay Type: |
Western blot |
| Annotation Date: |
2022-03-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1716828 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:6888156 |
| Age: |
postnatal year 1 |
| Image: |
1 |
|
| Specimen Label: |
Retina |
| Detected: |
true |
| Specimen Num: |
24 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6888151 |
| Assay Type: |
Western blot |
| Annotation Date: |
2022-03-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3287428 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:6888156 |
| Age: |
postnatal day 5 |
| Image: |
1 |
|
| Specimen Label: |
Intestine |
| Detected: |
true |
| Specimen Num: |
25 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6888151 |
| Assay Type: |
Western blot |
| Annotation Date: |
2022-03-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3287428 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:6888156 |
| Age: |
postnatal month 1 |
| Image: |
1 |
|
| Specimen Label: |
Intestine |
| Detected: |
true |
| Specimen Num: |
26 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6888151 |
| Assay Type: |
Western blot |
| Annotation Date: |
2022-03-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3287428 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:6888156 |
| Age: |
postnatal month 4 |
| Image: |
1 |
|
| Specimen Label: |
Intestine |
| Detected: |
true |
| Specimen Num: |
27 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6888151 |
| Assay Type: |
Western blot |
| Annotation Date: |
2022-03-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3287428 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:6888156 |
| Age: |
postnatal year 1 |
| Image: |
1 |
|
| Specimen Label: |
Intestine |
| Detected: |
true |
| Specimen Num: |
28 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1665821 |
| Pattern: |
Not Specified |
| Stage: |
TS21 |
| Assay Id: |
MGI:3617184 |
| Age: |
embryonic day 13.5 |
| Image: |
E13.5 |
|
| Specimen Label: |
E13.5 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691621 |
| Pattern: |
Not Specified |
| Stage: |
TS21 |
| Assay Id: |
MGI:3617184 |
| Age: |
embryonic day 13.5 |
| Image: |
E13.5 |
|
| Specimen Label: |
E13.5 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Ambiguous |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1691627 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:3617184 |
| Age: |
postnatal day 0 |
| Image: |
P0 |
| Note: |
Authors indicate that there was either ubiquitous or background expression. |
| Specimen Label: |
P0 |
|
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1760621 |
| Pattern: |
Not Specified |
| Stage: |
TS21 |
| Assay Id: |
MGI:3617184 |
| Age: |
embryonic day 13.5 |
| Image: |
E13.5 |
|
| Specimen Label: |
E13.5 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1760627 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:3617184 |
| Age: |
postnatal day 0 |
| Image: |
P0 |
|
| Specimen Label: |
P0 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1737328 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691923 |
| Age: |
postnatal adult |
| Image: |
MRC Harwell_1521216 |
| Note: |
kidney |
| Specimen Label: |
MRC Harwell_1521216 |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754921 |
| Pattern: |
Not Specified |
| Stage: |
TS21 |
| Assay Id: |
MGI:3617184 |
| Age: |
embryonic day 13.5 |
| Image: |
E13.5 |
|
| Specimen Label: |
E13.5 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Ambiguous |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754927 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:3617184 |
| Age: |
postnatal day 0 |
| Image: |
P0 |
| Note: |
Authors indicate that there was either ubiquitous or background expression. |
| Specimen Label: |
P0 |
|
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Ambiguous |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1697427 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:3617184 |
| Age: |
postnatal day 0 |
| Image: |
P0 |
| Note: |
Authors indicate that there was either ubiquitous or background expression. |
| Specimen Label: |
P0 |
|
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1706828 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691923 |
| Age: |
postnatal adult |
| Image: |
MRC Harwell_1521214 |
|
| Specimen Label: |
MRC Harwell_1521214 |
| Detected: |
true |
| Specimen Num: |
5 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1716821 |
| Pattern: |
Not Specified |
| Stage: |
TS21 |
| Assay Id: |
MGI:3617184 |
| Age: |
embryonic day 13.5 |
| Image: |
E13.5 |
|
| Specimen Label: |
E13.5 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1716827 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:3617184 |
| Age: |
postnatal day 0 |
| Image: |
P0 |
|
| Specimen Label: |
P0 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1403754 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-06-25 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3271122 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:7660700 |
| Age: |
embryonic day 14.5 |
|
|
| Specimen Label: |
Supplementary table 2 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1403754 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-06-25 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3271222 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:7660700 |
| Age: |
embryonic day 14.5 |
|
|
| Specimen Label: |
Supplementary table 2 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Ambiguous |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1753627 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:3617184 |
| Age: |
postnatal day 0 |
| Image: |
P0 |
| Note: |
Authors indicate that there was either ubiquitous or background expression. |
| Specimen Label: |
P0 |
|
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754421 |
| Pattern: |
Not Specified |
| Stage: |
TS21 |
| Assay Id: |
MGI:3617184 |
| Age: |
embryonic day 13.5 |
| Image: |
E13.5 |
| Note: |
Expression was detected in precortical tissue. |
| Specimen Label: |
E13.5 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754427 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:3617184 |
| Age: |
postnatal day 0 |
| Image: |
P0 |
|
| Specimen Label: |
P0 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3284527 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:3617184 |
| Age: |
postnatal day 0 |
| Image: |
P0 |
|
| Specimen Label: |
P0 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:1610528 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691923 |
| Age: |
postnatal adult |
| Image: |
MRC Harwell_1521211 |
|
| Specimen Label: |
MRC Harwell_1521211 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1797228 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691923 |
| Age: |
postnatal adult |
| Image: |
MRC Harwell_1521215 |
|
| Specimen Label: |
MRC Harwell_1521215 |
| Detected: |
true |
| Specimen Num: |
6 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6888136 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2022-03-15 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3568628 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6888139 |
| Age: |
postnatal month 4 |
| Image: |
2a |
|
| Specimen Label: |
2a |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6888136 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2022-03-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3574228 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6888139 |
| Age: |
postnatal month 4 |
| Image: |
2a |
|
| Specimen Label: |
2a |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1403754 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-06-25 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754722 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:7660700 |
| Age: |
embryonic day 14.5 |
|
| Note: |
Ventricular zone expression was greater than in the intermediate zone. |
| Specimen Label: |
Supplementary table 2 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Ambiguous |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679727 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:3617184 |
| Age: |
postnatal day 0 |
| Image: |
P0 |
| Note: |
Authors indicate that there was either ubiquitous or background expression. |
| Specimen Label: |
P0 |
|
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Ambiguous |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754027 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:3617184 |
| Age: |
postnatal day 0 |
| Image: |
P0 |
| Note: |
Authors indicate that there was either ubiquitous or background expression. |
| Specimen Label: |
P0 |
|
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3280927 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:3617184 |
| Age: |
postnatal day 0 |
| Image: |
P0 |
|
| Specimen Label: |
P0 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3267921 |
| Pattern: |
Not Specified |
| Stage: |
TS21 |
| Assay Id: |
MGI:3617184 |
| Age: |
embryonic day 13.5 |
| Image: |
E13.5 |
|
| Specimen Label: |
E13.5 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757721 |
| Pattern: |
Not Specified |
| Stage: |
TS21 |
| Assay Id: |
MGI:3617184 |
| Age: |
embryonic day 13.5 |
| Image: |
E13.5 |
|
| Specimen Label: |
E13.5 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3615826 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-03-21 |
| Strength: |
Ambiguous |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757727 |
| Pattern: |
Not Specified |
| Stage: |
TS27 |
| Assay Id: |
MGI:3617184 |
| Age: |
postnatal day 0 |
| Image: |
P0 |
| Note: |
Authors indicate that there was either ubiquitous or background expression. |
| Specimen Label: |
P0 |
|
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:3281228 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691923 |
| Age: |
postnatal adult |
| Image: |
MRC Harwell_1521214 |
|
| Specimen Label: |
MRC Harwell_1521214 |
| Detected: |
true |
| Specimen Num: |
5 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:1689428 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691923 |
| Age: |
postnatal adult |
| Image: |
MRC Harwell_1521210 |
|
| Specimen Label: |
MRC Harwell_1521210 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1689428 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691923 |
| Age: |
postnatal adult |
| Image: |
MRC Harwell_1521212 |
|
| Specimen Label: |
MRC Harwell_1521212 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1689428 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691923 |
| Age: |
postnatal adult |
| Image: |
MRC Harwell_1521213 |
|
| Specimen Label: |
MRC Harwell_1521213 |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Farkas MH |
| Year: |
2014 |
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Am J Pathol |
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Mutations in pre-mRNA processing factors 3, 8, and 31 cause dysfunction of the retinal pigment epithelium. |
| Volume: |
184 |
| Issue: |
10 |
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2641-52 |
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•
•
•
•
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Jelcick AS |
| Year: |
2011 |
| Journal: |
PLoS One |
| Title: |
Genetic variations strongly influence phenotypic outcome in the mouse retina. |
| Volume: |
6 |
| Issue: |
7 |
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e21858 |
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•
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McKee AE |
| Year: |
2005 |
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BMC Dev Biol |
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A genome-wide in situ hybridization map of RNA-binding proteins reveals anatomically restricted expression in the developing mouse brain. |
| Volume: |
5 |
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| Pages: |
14 |
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•
•
•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
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| Title: |
FANTOM2 Data Curation in Mouse Genome Informatics |
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Hansen J |
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2003 |
| Journal: |
Proc Natl Acad Sci U S A |
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A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
| Volume: |
100 |
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17 |
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•
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Friedel RH |
| Year: |
2007 |
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Brief Funct Genomic Proteomic |
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EUCOMM--the European conditional mouse mutagenesis program. |
| Volume: |
6 |
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3 |
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180-5 |
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•
•
•
•
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Koscielny G |
| Year: |
2014 |
| Journal: |
Nucleic Acids Res |
| Title: |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
| Volume: |
42 |
| Issue: |
Database issue |
| Pages: |
D802-9 |
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•
•
•
•
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| Publication |
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Stryke D |
| Year: |
2003 |
| Journal: |
Nucleic Acids Res |
| Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
| Volume: |
31 |
| Issue: |
1 |
| Pages: |
278-81 |
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•
•
•
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| Publication |
| First Author: |
Bedogni F |
| Year: |
2021 |
| Journal: |
Front Mol Neurosci |
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Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
| Volume: |
14 |
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| Pages: |
686034 |
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•
•
•
•
•
|
| Publication |
| First Author: |
International Knockout Mouse Consortium |
| Year: |
2014 |
| Journal: |
Database Download |
| Title: |
MGI download of modified allele data from IKMC and creation of new knockout alleles |
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|
•
•
•
•
•
|
| Publication |
| First Author: |
International Mouse Strain Resource |
| Year: |
2014 |
| Journal: |
Database Download |
| Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Wellcome Trust Sanger Institute |
| Year: |
2009 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
|
|
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
| Year: |
2014 |
| Journal: |
Database Release |
| Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
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•
•
•
•
•
|
| Publication |
| First Author: |
Hansen GM |
| Year: |
2008 |
| Journal: |
Genome Res |
| Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
| Volume: |
18 |
| Issue: |
10 |
| Pages: |
1670-9 |
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•
•
•
•
•
|
| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2014 |
|
| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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•
•
•
•
•
|
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
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•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database |
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Carninci P |
| Year: |
2005 |
| Journal: |
Science |
| Title: |
The transcriptional landscape of the mammalian genome. |
| Volume: |
309 |
| Issue: |
5740 |
| Pages: |
1559-63 |
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•
•
•
•
•
|
| Publication |
| First Author: |
Kawai J |
| Year: |
2001 |
| Journal: |
Nature |
| Title: |
Functional annotation of a full-length mouse cDNA collection. |
| Volume: |
409 |
| Issue: |
6821 |
| Pages: |
685-90 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Adams DJ |
| Year: |
2024 |
| Journal: |
Nature |
| Title: |
Genetic determinants of micronucleus formation in vivo. |
| Volume: |
627 |
| Issue: |
8002 |
| Pages: |
130-136 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zambrowicz BP |
| Year: |
2003 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
| Volume: |
100 |
| Issue: |
24 |
| Pages: |
14109-14 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
GemPharmatech |
| Year: |
2020 |
|
| Title: |
GemPharmatech Website. |
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|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Skarnes WC |
| Year: |
2011 |
| Journal: |
Nature |
| Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
| Volume: |
474 |
| Issue: |
7351 |
| Pages: |
337-42 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
| Year: |
2008 |
| Journal: |
Database Download |
| Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
| Year: |
2011 |
|
| Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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•
•
•
•
•
|
| Publication |
| First Author: |
GOA curators |
| Year: |
2016 |
|
| Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Okazaki Y |
| Year: |
2002 |
| Journal: |
Nature |
| Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
| Volume: |
420 |
| Issue: |
6915 |
| Pages: |
563-73 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2010 |
|
| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
•
•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
•
•
•
•
|
| Publication |
| First Author: |
MGI Genome Annotation Group and UniGene Staff |
| Year: |
2015 |
| Journal: |
Database Download |
| Title: |
MGI-UniGene Interconnection Effort |
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|
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
|
| Title: |
Annotation inferences using phylogenetic trees |
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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|
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
|
|
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
|
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|
•
•
•
•
•
|
| Publication |
| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
| Allele |
| Name: |
pre-mRNA processing factor 3; gene trap RRO284, BayGenomics |
| Allele Type: |
Gene trapped |
| Attribute String: |
Null/knockout, Reporter |
|
•
•
•
•
•
|
| Allele |
| Name: |
pre-mRNA processing factor 3; targeted mutation 1.1, Eric A Pierce |
| Allele Type: |
Targeted |
| Attribute String: |
Humanized sequence |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Prpf3/Prpf3<+> |
| Background: |
involves: 129P2/OlaHsd * C57BL/6 |
| Zygosity: |
ht |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Prpf3/Prpf3<+> |
| Background: |
involves: 129S6/SvEvTac * C57BL/6 * SJL |
| Zygosity: |
ht |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Prpf3/Prpf3 |
| Background: |
involves: 129S6/SvEvTac * C57BL/6 * SJL |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| DO Term |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Anthony JG |
| Year: |
1997 |
| Journal: |
RNA |
| Title: |
The yeast Prp3 protein is a U4/U6 snRNP protein necessary for integrity of the U4/U6 snRNP and the U4/U6.U5 tri-snRNP. |
| Volume: |
3 |
| Issue: |
10 |
| Pages: |
1143-52 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
MartÃnez-Gimeno M |
| Year: |
2003 |
| Journal: |
Invest Ophthalmol Vis Sci |
| Title: |
Mutations in the pre-mRNA splicing-factor genes PRPF3, PRPF8, and PRPF31 in Spanish families with autosomal dominant retinitis pigmentosa. |
| Volume: |
44 |
| Issue: |
5 |
| Pages: |
2171-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gonzalez-Santos JM |
| Year: |
2008 |
| Journal: |
Hum Mol Genet |
| Title: |
Mutation in the splicing factor Hprp3p linked to retinitis pigmentosa impairs interactions within the U4/U6 snRNP complex. |
| Volume: |
17 |
| Issue: |
2 |
| Pages: |
225-39 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wang A |
| Year: |
1997 |
| Journal: |
Hum Mol Genet |
| Title: |
Identification and characterization of human genes encoding Hprp3p and Hprp4p, interacting components of the spliceosome. |
| Volume: |
6 |
| Issue: |
12 |
| Pages: |
2117-26 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Huang CF |
| Year: |
2013 |
| Journal: |
PLoS Genet |
| Title: |
A Pre-mRNA-splicing factor is required for RNA-directed DNA methylation in Arabidopsis. |
| Volume: |
9 |
| Issue: |
9 |
| Pages: |
e1003779 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Prp3 (also known as PRP3) participates in pre-mRNA splicing []. It may play a role in the assembly of the U4/U5/U6 tri-snRNP complex []. Defects in PRPF3 are the cause of retinitis pigmentosa type 18 (RP18). RP leads to degeneration of retinal photoreceptor cells [, , ]. In Arabidposis thaliana, protein RDM16 acts as a pre-mRNA splicing factor and functions in RNA-directed DNA methylation by influencing Pol V transcript levels []. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chakarova CF |
| Year: |
2002 |
| Journal: |
Hum Mol Genet |
| Title: |
Mutations in HPRP3, a third member of pre-mRNA splicing factor genes, implicated in autosomal dominant retinitis pigmentosa. |
| Volume: |
11 |
| Issue: |
1 |
| Pages: |
87-92 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
114
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
683
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
683
 |
| Fragment?: |
false |
|
•
•
•
•
•
|