Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3267923 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_23 |
|
Specimen Label: |
euxassay_005228_23 |
Detected: |
true |
Specimen Num: |
22 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3267923 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_24 |
|
Specimen Label: |
euxassay_005228_24 |
Detected: |
true |
Specimen Num: |
23 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_02 |
|
Specimen Label: |
euxassay_005228_02 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_03 |
|
Specimen Label: |
euxassay_005228_03 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_04 |
|
Specimen Label: |
euxassay_005228_04 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_05 |
|
Specimen Label: |
euxassay_005228_05 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_06 |
|
Specimen Label: |
euxassay_005228_06 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_07 |
|
Specimen Label: |
euxassay_005228_07 |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_08 |
|
Specimen Label: |
euxassay_005228_08 |
Detected: |
true |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_09 |
|
Specimen Label: |
euxassay_005228_09 |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_10 |
|
Specimen Label: |
euxassay_005228_10 |
Detected: |
true |
Specimen Num: |
9 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_11 |
|
Specimen Label: |
euxassay_005228_11 |
Detected: |
true |
Specimen Num: |
10 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_12 |
|
Specimen Label: |
euxassay_005228_12 |
Detected: |
true |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_13 |
|
Specimen Label: |
euxassay_005228_13 |
Detected: |
true |
Specimen Num: |
12 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_14 |
|
Specimen Label: |
euxassay_005228_14 |
Detected: |
true |
Specimen Num: |
13 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_15 |
|
Specimen Label: |
euxassay_005228_15 |
Detected: |
true |
Specimen Num: |
14 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_16 |
|
Specimen Label: |
euxassay_005228_16 |
Detected: |
true |
Specimen Num: |
15 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_17 |
|
Specimen Label: |
euxassay_005228_17 |
Detected: |
true |
Specimen Num: |
16 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_18 |
|
Specimen Label: |
euxassay_005228_18 |
Detected: |
true |
Specimen Num: |
17 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_19 |
|
Specimen Label: |
euxassay_005228_19 |
Detected: |
true |
Specimen Num: |
18 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_20 |
|
Specimen Label: |
euxassay_005228_20 |
Detected: |
true |
Specimen Num: |
19 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_21 |
|
Specimen Label: |
euxassay_005228_21 |
Detected: |
true |
Specimen Num: |
20 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_22 |
|
Specimen Label: |
euxassay_005228_22 |
Detected: |
true |
Specimen Num: |
21 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_23 |
|
Specimen Label: |
euxassay_005228_23 |
Detected: |
true |
Specimen Num: |
22 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1059981 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1689423 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827606 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_005228_24 |
|
Specimen Label: |
euxassay_005228_24 |
Detected: |
true |
Specimen Num: |
23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hattori M |
Year: |
1995 |
Journal: |
Mol Cell Biol |
Title: |
Molecular cloning of a novel mitogen-inducible nuclear protein with a Ran GTPase-activating domain that affects cell cycle progression. |
Volume: |
15 |
Issue: |
1 |
Pages: |
552-60 |
|
•
•
•
•
•
|
Publication |
First Author: |
Itier JM |
Year: |
1998 |
Journal: |
Nature |
Title: |
Imprinted gene in postnatal growth role. |
Volume: |
393 |
Issue: |
6681 |
Pages: |
125-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kahana JA |
Year: |
1999 |
Journal: |
J Cell Biol |
Title: |
Beyond nuclear transport. Ran-GTP as a determinant of spindle assembly. |
Volume: |
146 |
Issue: |
6 |
Pages: |
1205-10 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
589
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
von Melchner H |
Year: |
1992 |
Journal: |
Genes Dev |
Title: |
Selective disruption of genes expressed in totipotent embryonal stem cells. |
Volume: |
6 |
Issue: |
6 |
Pages: |
919-27 |
|
•
•
•
•
•
|
Publication |
First Author: |
Uchimura Y |
Year: |
2004 |
Journal: |
FEBS Lett |
Title: |
Generation of SUMO-1 modified proteins in E. coli: towards understanding the biochemistry/structural biology of the SUMO-1 pathway. |
Volume: |
564 |
Issue: |
1-2 |
Pages: |
85-90 |
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•
•
•
•
•
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Publication |
First Author: |
DeGregori J |
Year: |
1994 |
Journal: |
Genes Dev |
Title: |
A murine homolog of the yeast RNA1 gene is required for postimplantation development. |
Volume: |
8 |
Issue: |
3 |
Pages: |
265-76 |
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•
•
•
•
•
|
Publication |
First Author: |
Yamaguchi T |
Year: |
2005 |
Journal: |
Mol Cell Biol |
Title: |
Mutation of SENP1/SuPr-2 reveals an essential role for desumoylation in mouse development. |
Volume: |
25 |
Issue: |
12 |
Pages: |
5171-82 |
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•
•
•
•
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Publication |
First Author: |
Fu J |
Year: |
2014 |
Journal: |
PLoS Genet |
Title: |
Disruption of SUMO-specific protease 2 induces mitochondria mediated neurodegeneration. |
Volume: |
10 |
Issue: |
10 |
Pages: |
e1004579 |
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•
•
•
•
•
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Publication |
First Author: |
Takahashi H |
Year: |
2005 |
Journal: |
J Biol Chem |
Title: |
Noncovalent SUMO-1 binding activity of thymine DNA glycosylase (TDG) is required for its SUMO-1 modification and colocalization with the promyelocytic leukemia protein. |
Volume: |
280 |
Issue: |
7 |
Pages: |
5611-21 |
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•
•
•
•
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Publication |
First Author: |
Kim EY |
Year: |
2012 |
Journal: |
J Mol Cell Cardiol |
Title: |
Enhanced desumoylation in murine hearts by overexpressed SENP2 leads to congenital heart defects and cardiac dysfunction. |
Volume: |
52 |
Issue: |
3 |
Pages: |
638-49 |
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•
•
•
•
•
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Publication |
First Author: |
Fujiwara K |
Year: |
2016 |
Journal: |
Genes Cells |
Title: |
Terminal differentiation of cortical neurons rapidly remodels RanGAP-mediated nuclear transport system. |
Volume: |
21 |
Issue: |
11 |
Pages: |
1176-1194 |
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•
•
•
•
|
Publication |
First Author: |
Jones BC |
Year: |
1999 |
Journal: |
Pharmacogenetics |
Title: |
Quantitative-trait loci analysis of cocaine-related behaviours and neurochemistry. |
Volume: |
9 |
Issue: |
5 |
Pages: |
607-17 |
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•
•
•
•
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Publication |
First Author: |
Landry J |
Year: |
2008 |
Journal: |
PLoS Genet |
Title: |
Essential role of chromatin remodeling protein Bptf in early mouse embryos and embryonic stem cells. |
Volume: |
4 |
Issue: |
10 |
Pages: |
e1000241 |
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•
•
•
•
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Publication |
First Author: |
Thuret S |
Year: |
2004 |
Journal: |
Mol Cell Neurosci |
Title: |
Identification and developmental analysis of genes expressed by dopaminergic neurons of the substantia nigra pars compacta. |
Volume: |
25 |
Issue: |
3 |
Pages: |
394-405 |
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•
•
•
•
|
Publication |
First Author: |
Ko MS |
Year: |
1998 |
Journal: |
Hum Mol Genet |
Title: |
Genome-wide mapping of unselected transcripts from extraembryonic tissue of 7.5-day mouse embryos reveals enrichment in the t-complex and under-representation on the X chromosome. |
Volume: |
7 |
Issue: |
12 |
Pages: |
1967-78 |
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•
•
•
•
•
|
Publication |
First Author: |
Birgit Meldal and Sandra Orchard (1). (1) European Bioinformatics Institute (EBI), Hinxton, Cambridgeshire, United Kingdom |
Year: |
2023 |
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Title: |
Manual transfer of experimentally-verified manual GO annotation data to homologous complexes by curator judgment of sequence, composition and function similarity |
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•
•
•
•
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Publication |
First Author: |
Ko MS |
Year: |
2000 |
Journal: |
Development |
Title: |
Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
Volume: |
127 |
Issue: |
8 |
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1737-49 |
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•
•
•
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Publication |
First Author: |
Hansen J |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
Volume: |
100 |
Issue: |
17 |
Pages: |
9918-22 |
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•
•
•
•
|
Publication |
First Author: |
Stryke D |
Year: |
2003 |
Journal: |
Nucleic Acids Res |
Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
Volume: |
31 |
Issue: |
1 |
Pages: |
278-81 |
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•
•
•
•
|
Publication |
First Author: |
International Mouse Strain Resource |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
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|
•
•
•
•
•
|
Publication |
First Author: |
Wellcome Trust Sanger Institute |
Year: |
2009 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
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|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hansen GM |
Year: |
2008 |
Journal: |
Genome Res |
Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
Volume: |
18 |
Issue: |
10 |
Pages: |
1670-9 |
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•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
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Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
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2001 |
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Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
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PLoS Biol |
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BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
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The transcriptional landscape of the mammalian genome. |
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Nature |
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MGD Nomenclature Committee |
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Nomenclature Committee Use |
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Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
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Nature |
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A conditional knockout resource for the genome-wide study of mouse gene function. |
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474 |
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7351 |
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First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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Cyagen Biosciences Inc. |
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Title: |
Cyagen Biosciences Website. |
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First Author: |
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Year: |
2011 |
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Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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Publication |
First Author: |
GOA curators |
Year: |
2016 |
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Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
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2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
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First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
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6915 |
Pages: |
563-73 |
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Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
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Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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PLoS Biol |
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A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
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Mouse Genome Informatics Scientific Curators |
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2002 |
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Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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Mouse Genome Informatics Scientific Curators |
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2010 |
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Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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Year: |
2010 |
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Title: |
Annotation inferences using phylogenetic trees |
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First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Mouse Genome Informatics Scientific Curators |
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2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
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Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Publication |
First Author: |
Mahajan R |
Year: |
1997 |
Journal: |
Cell |
Title: |
A small ubiquitin-related polypeptide involved in targeting RanGAP1 to nuclear pore complex protein RanBP2. |
Volume: |
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Publication |
First Author: |
Xu XM |
Year: |
2008 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
RanGAP1 is a continuous marker of the Arabidopsis cell division plane. |
Volume: |
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Publication |
First Author: |
Saitoh H |
Year: |
1998 |
Journal: |
Curr Biol |
Title: |
Ubc9p and the conjugation of SUMO-1 to RanGAP1 and RanBP2. |
Volume: |
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Issue: |
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Publication |
First Author: |
Mahajan R |
Year: |
1998 |
Journal: |
J Cell Biol |
Title: |
Molecular characterization of the SUMO-1 modification of RanGAP1 and its role in nuclear envelope association. |
Volume: |
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259-70 |
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Publication |
First Author: |
Cha K |
Year: |
2015 |
Journal: |
PLoS One |
Title: |
The Cellular Distribution of RanGAP1 Is Regulated by CRM1-Mediated Nuclear Export in Mammalian Cells. |
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10 |
Pages: |
e0141309 |
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Publication |
First Author: |
Zhu S |
Year: |
2006 |
Journal: |
Exp Cell Res |
Title: |
SUMO modification through rapamycin-mediated heterodimerization reveals a dual role for Ubc9 in targeting RanGAP1 to nuclear pore complexes. |
Volume: |
312 |
Issue: |
7 |
Pages: |
1042-9 |
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Protein Domain |
Type: |
Domain |
Description: |
Ran GTPase is a ubiquitous protein required for nuclear transport, spindle assembly, nuclear assembly and mitotic cell cycle regulation. RanGTPase activating protein 1 (RanGAP1) is one of several RanGTPase accessory proteins. During interphase, RanGAP1 is located in the cytoplasm, while during mitosis it becomes associated with the kinetochores []. Cytoplasmic RanGAP1 is required for RanGTPase-directed nuclear transport. The activity of RanGAP1 requires the accessory protein RanBP1. RanBP1 facilitates RanGAP1 hydrolysis of Ran-GTP, both directly and by promoting the dissociation of Ran-GTP from transport receptors, which would otherwise block RanGAP1-mediated hydrolysis. RanGAP1 is thought to bind to the Switch 1 and Switch 2 regions of RanGTPase. The Switch 2 region can be buried in complexes with karyopherin-beta2, and requires the interaction with RanBP1 to permit RanGAP1 function. RanGAP1 can undergo SUMO (small ubiquitin-like modifier) modification, which targets RanGAP1 to RanBP2/Nup358 in the nuclear pore complex, and is required for association with the nuclear pore complex and for nuclear transport []. The enzymes involved in SUMO modification are located on the filaments of the nuclear pore complex.The RanGAP1 N-terminal domain is fairly well conserved between vertebrate and fungal proteins, but yeast does not contain the C-terminal domain. The C-terminal domain is SUMO-modified and required for the localisation of RanGAP1 at the nuclear pore complex. The structure of the C-terminal domain is multihelical, consisting of two curved alpha/alpha layers in a right-handed superhelix. |
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Protein Domain |
Type: |
Homologous_superfamily |
Description: |
Ran GTPase is a ubiquitous protein required for nuclear transport, spindle assembly, nuclear assembly and mitotic cell cycle regulation. RanGTPase activating protein 1 (RanGAP1) is one of several RanGTPase accessory proteins. During interphase, RanGAP1 is located in the cytoplasm, while during mitosis it becomes associated with the kinetochores []. Cytoplasmic RanGAP1 is required for RanGTPase-directed nuclear transport. The activity of RanGAP1 requires the accessory protein RanBP1. RanBP1 facilitates RanGAP1 hydrolysis of Ran-GTP, both directly and by promoting the dissociation of Ran-GTP from transport receptors, which would otherwise block RanGAP1-mediated hydrolysis. RanGAP1 is thought to bind to the Switch 1 and Switch 2 regions of RanGTPase. The Switch 2 region can be buried in complexes with karyopherin-beta2, and requires the interaction with RanBP1 to permit RanGAP1 function. RanGAP1 can undergo SUMO (small ubiquitin-like modifier) modification, which targets RanGAP1 to RanBP2/Nup358 in the nuclear pore complex, and is required for association with the nuclear pore complex and for nuclear transport []. The enzymes involved in SUMO modification are located on the filaments of the nuclear pore complex.The RanGAP1 N-terminal domain is fairly well conserved between vertebrate and fungal proteins, but yeast does not contain the C-terminal domain. The C-terminal domain is SUMO-modified and required for the localisation of RanGAP1 at the nuclear pore complex. The structure of the C-terminal domain is multihelical, consisting of two curved alpha/alpha layers in a right-handed superhelix. |
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Publication |
First Author: |
Bernier-Villamor V |
Year: |
2002 |
Journal: |
Cell |
Title: |
Structural basis for E2-mediated SUMO conjugation revealed by a complex between ubiquitin-conjugating enzyme Ubc9 and RanGAP1. |
Volume: |
108 |
Issue: |
3 |
Pages: |
345-56 |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
58
 |
Fragment?: |
true |
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•
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Publication |
First Author: |
Arnaoutov A |
Year: |
2003 |
Journal: |
Dev Cell |
Title: |
The Ran GTPase regulates kinetochore function. |
Volume: |
5 |
Issue: |
1 |
Pages: |
99-111 |
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•
•
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•
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Publication |
First Author: |
Pay A |
Year: |
2002 |
Journal: |
Plant J |
Title: |
Plant RanGAPs are localized at the nuclear envelope in interphase and associated with microtubules in mitotic cells. |
Volume: |
30 |
Issue: |
6 |
Pages: |
699-709 |
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•
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•
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Protein Domain |
Type: |
Family |
Description: |
This entry includes RanGAP1/2 mostly from plants. They are GTPase activators for the nuclear Ras-related regulatory protein Ran, converting it to the putatively inactive GDP-bound state []. RanGAP1 may have a role in spatial signaling during plant cell division []. |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
144
 |
Fragment?: |
true |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
396
 |
Fragment?: |
false |
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•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
483
 |
Fragment?: |
false |
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
646
 |
Fragment?: |
true |
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
589
 |
Fragment?: |
false |
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•
•
•
•
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Protein Domain |
Type: |
Domain |
Description: |
This domain family is found in eukaryotes, and is approximately 60 amino acids in length. The family is found in association with , , . There are two conserved sequence motifs: TFFC and EDF. Nup358/RanBP2 is a nucleoporin involved in ubiquitination of many different protein targets from various cellular pathways. It complexes with Ubc9, SUMO-1 and RanGAP1 to perform this function. This is the ligase domain which binds to Ubc9. |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
257
 |
Fragment?: |
true |
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•
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Publication |
First Author: |
Liu ML |
Year: |
2024 |
Journal: |
Cell Death Dis |
Title: |
Screens in aging-relevant human ALS-motor neurons identify MAP4Ks as therapeutic targets for the disease. |
Volume: |
15 |
Issue: |
1 |
Pages: |
4 |
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