Type |
Details |
Score |
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
1 |
Description: |
DNA repair protein REV1 |
Type: |
chain |
End: |
1249 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
82
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
93
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
138
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
22
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
98
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang Y |
Year: |
2015 |
Journal: |
Nucleic Acids Res |
Title: |
FANCD2 and REV1 cooperate in the protection of nascent DNA strands in response to replication stress. |
Volume: |
43 |
Issue: |
17 |
Pages: |
8325-39 |
|
•
•
•
•
•
|
Pathway |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
REV1 protein interacts with PCNA: significance of the REV1 BRCT domain in vitro and in vivo. |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
REV1 promotes PCNA monoubiquitination through interacting with ubiquitinated RAD18. |
|
•
•
•
•
•
|
Publication |
First Author: |
Kikuchi S |
Year: |
2012 |
Journal: |
J Biol Chem |
Title: |
Structural basis of recruitment of DNA polymerase ζ by interaction between REV1 and REV7 proteins. |
Volume: |
287 |
Issue: |
40 |
Pages: |
33847-52 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lawrence CW |
Year: |
2004 |
Journal: |
Adv Protein Chem |
Title: |
Cellular functions of DNA polymerase zeta and Rev1 protein. |
Volume: |
69 |
|
Pages: |
167-203 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lawrence CW |
Year: |
2002 |
Journal: |
DNA Repair (Amst) |
Title: |
Cellular roles of DNA polymerase zeta and Rev1 protein. |
Volume: |
1 |
Issue: |
6 |
Pages: |
425-35 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang Z |
Year: |
2016 |
Journal: |
J Cell Sci |
Title: |
REV1 promotes PCNA monoubiquitylation through interacting with ubiquitylated RAD18. |
Volume: |
129 |
Issue: |
6 |
Pages: |
1223-33 |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
Ubiquitin-binding motifs in REV1 protein are required for its role in the tolerance of DNA damage. |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
Mouse Rev1 protein interacts with multiple DNA polymerases involved in translesion DNA synthesis. |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
XRCC1 interaction with the REV1 C-terminal domain suggests a role in post replication repair. |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
Starvation promotes REV1 SUMOylation and p53-dependent sensitization of melanoma and breast cancer cells. |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
Rev1 plays central roles in mammalian DNA-damage tolerance in response to UV irradiation. |
|
•
•
•
•
•
|
Publication |
First Author: |
D'Souza S |
Year: |
2008 |
Journal: |
DNA Repair (Amst) |
Title: |
Novel conserved motifs in Rev1 C-terminus are required for mutagenic DNA damage tolerance. |
Volume: |
7 |
Issue: |
9 |
Pages: |
1455-70 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pozhidaeva A |
Year: |
2012 |
Journal: |
Biochemistry |
Title: |
NMR structure and dynamics of the C-terminal domain from human Rev1 and its complex with Rev1 interacting region of DNA polymerase η. |
Volume: |
51 |
Issue: |
27 |
Pages: |
5506-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lawrence CW |
Year: |
2001 |
Journal: |
Biochem Soc Trans |
Title: |
Eukaryotic mutagenesis and translesion replication dependent on DNA polymerase zeta and Rev1 protein. |
Volume: |
29 |
Issue: |
Pt 2 |
Pages: |
187-91 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gabel SA |
Year: |
2013 |
Journal: |
DNA Repair (Amst) |
Title: |
XRCC1 interaction with the REV1 C-terminal domain suggests a role in post replication repair. |
Volume: |
12 |
Issue: |
12 |
Pages: |
1105-13 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shim HS |
Year: |
2015 |
Journal: |
Cancer Res |
Title: |
Starvation promotes REV1 SUMOylation and p53-dependent sensitization of melanoma and breast cancer cells. |
Volume: |
75 |
Issue: |
6 |
Pages: |
1056-67 |
|
•
•
•
•
•
|
Publication |
First Author: |
Niu X |
Year: |
2019 |
Journal: |
FEBS J |
Title: |
Rev1 plays central roles in mammalian DNA-damage tolerance in response to UV irradiation. |
Volume: |
286 |
Issue: |
14 |
Pages: |
2711-2725 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kosarek JN |
Year: |
2008 |
Journal: |
DNA Repair (Amst) |
Title: |
Comparative analysis of in vivo interactions between Rev1 protein and other Y-family DNA polymerases in animals and yeasts. |
Volume: |
7 |
Issue: |
3 |
Pages: |
439-51 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
211
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
3122
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the C-terminal domain of DNA repair protein Rev1, an enzyme which allows DNA synthesis to proceed even in the presence of DNA damage. Rev1 belongs to the Y-family of TLS polymerases. Rev1 possess a limited catalytic activity but it has a second and more important function which involved the recruitment and coordination of other Y-family TLS polymerases and the regulatory subunit Rev7 of the B-family polymerase pol. This interaction is mediated by its C-terminal domain which therefore serves as a scaffold that allows access of the Y-family polymerases to their cognate DNA lesions and the subsequent exchange to pol, which then extends the distorted DNA primer terminus opposite the lesion [, ]. This domain adopts a four-helix bundle that interacts with Rev7, Polkappa and Poleta. However, the Rev7-binding interface is distinct from the binding site of DNA polymerase eta or kappa [, ]. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Homologous_superfamily |
Description: |
This entry represents the C-terminal domain of DNA repair protein Rev1, an enzyme which allows DNA synthesis to proceed even in the presence of DNA damage. Rev1 belongs to the Y-family of TLS polymerases. Rev1 possess a limited catalytic activity but it has a second and more important function which involved the recruitment and coordination of other Y-family TLS polymerases and the regulatory subunit Rev7 of the B-family polymerase pol. This interaction is mediated by its C-terminal domain which therefore serves as a scaffold that allows access of the Y-family polymerases to their cognate DNA lesions and the subsequent exchange to pol, which then extends the distorted DNA primer terminus opposite the lesion [, ]. This domain adopts a four-helix bundle that interacts with Rev7, Polkappa and Poleta. However, the Rev7-binding interface is distinct from the binding site of DNA polymerase eta or kappa [, ]. |
|
•
•
•
•
•
|
Publication |
First Author: |
Thientosapol ES |
Year: |
2018 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
SAMHD1 enhances immunoglobulin hypermutation by promoting transversion mutation. |
Volume: |
115 |
Issue: |
19 |
Pages: |
4921-4926 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gerlach VL |
Year: |
1999 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Human and mouse homologs of Escherichia coli DinB (DNA polymerase IV), members of the UmuC/DinB superfamily. |
Volume: |
96 |
Issue: |
21 |
Pages: |
11922-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Smith BT |
Year: |
1998 |
Journal: |
Genetics |
Title: |
Mutagenesis and more: umuDC and the Escherichia coli SOS response. |
Volume: |
148 |
Issue: |
4 |
Pages: |
1599-610 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
In Escherichia coli, UV and many chemicals appear to cause mutagenesis by a process of translesion synthesis that requires DNA polymerase III and the SOS-regulated proteins UmuD, UmuC and RecA. This machinery allows the replication to continuethrough DNA lesion, and therefore avoid lethal interruption of DNA replication after DNA damage []. UmuC is a well conserved protein in prokaryotes, with a homologue in yeast species.Proteins known to contain an UmuC domain are listed below: E. coli MucB protein. Plasmid-born analogue of the UmuC protein.Saccharomyces cerevisiae (Baker's yeast) Rev1 protein. Homologue of UmuC also required for normal induction of mutations by physical and chemical agents. Salmonella typhimurium ImpB protein. Plasmid-born analogue of the UmuC protein.Bacterial UmuC protein.E. coli DNA-damage-inducible protein P (DinP).S. typhimurium SamB homologue of UmuC plasmid associated. |
|
•
•
•
•
•
|
Publication |
First Author: |
Ogi T |
Year: |
1999 |
Journal: |
Genes Cells |
Title: |
Mutation enhancement by DINB1, a mammalian homologue of the Escherichia coli mutagenesis protein dinB. |
Volume: |
4 |
Issue: |
11 |
Pages: |
607-18 |
|
•
•
•
•
•
|
Publication |
First Author: |
Esposito G |
Year: |
2000 |
Journal: |
Curr Biol |
Title: |
Disruption of the Rev3l-encoded catalytic subunit of polymerase zeta in mice results in early embryonic lethality. |
Volume: |
10 |
Issue: |
19 |
Pages: |
1221-4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Xie K |
Year: |
2010 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Error-prone translesion synthesis mediates acquired chemoresistance. |
Volume: |
107 |
Issue: |
48 |
Pages: |
20792-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Boersma V |
Year: |
2015 |
Journal: |
Nature |
Title: |
MAD2L2 controls DNA repair at telomeres and DNA breaks by inhibiting 5' end resection. |
Volume: |
521 |
Issue: |
7553 |
Pages: |
537-540 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
339
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
349
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
356
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1131
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
364
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
169
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
135
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
239
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
102
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
237
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Homologous_superfamily |
Description: |
This entry represents the little finger domain superfamily found in Y-family (lesion bypass) DNA polymerases. Y-family polymerases were originally known as UmuC/DinB/Rev1/Rad30 after each branch of the family. These enzymes are characterised by their low-fidelity synthesis on undamaged DNA templates and by their ability to traverse replication-blocking lesions. By contrast, high-fidelity polymerases (such as DNA polymerase III) are sensitive to distortions in the DNA template. As a result, Y-family polymerases can extend primer strands across DNA strand lesions that would otherwise stall replicative polymerases. To minimize mutations through their low fidelity synthesis, these enzymes are regulated, and are thought to interact with processivity factors, β-clamp or proliferating cell nuclear antigen (PCNA), which are also essential for the function of replicative DNA polymerases []. Organisms can contain more than one Y-family polymerase, each with a unique DNA damage bypass and fidelity profile. For example, humans posses four Y-family polymerases: DNA polymerases kappa, iota, eta and Rev1. Y-family polymerases show no homology to DNA polymerases from the A-, B-, C-, D- or X-families []. The Y-family of DNA polymerases includes the following enzymes:Prokaryotic DNA polymerase IV (DinB) [].Archaeal DinB homologue DNA polymerase IV [].Eukaryotic DinB homologue DNA polymerase kappa [].Prokarytoic DNA repair proteins UmuC and UmuD [].Eukaryotic Rad30 homologues DNA polymerase eta and iota [, ].Eukaryotic DNA repair protein Rev1 [].Human DNA polymerase kappa is a right-handed shaped molecule with palm, fingers, thumb, little finger and wrist subdomains []. The little finger domain has a beta-α-β(2)-α-β fold with antiparallel β-sheet and a reversed ferredoxin-like topology. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the little finger domain found in Y-family (lesion bypass) DNA polymerases. Y-family polymerases were originally known as UmuC/DinB/Rev1/Rad30 after each branch of the family. These enzymes are characterised by their low-fidelity synthesis on undamaged DNA templates and by their ability to traverse replication-blocking lesions. By contrast, high-fidelity polymerases (such as DNA polymerase III) are sensitive to distortions in the DNA template. As a result, Y-family polymerases can extend primer strands across DNA strand lesions that would otherwise stall replicative polymerases. To minimize mutations through their low fidelity synthesis, these enzymes are regulated, and are thought to interact with processivity factors, β-clamp or proliferating cell nuclear antigen (PCNA), which are also essential for the function of replicative DNA polymerases []. Organisms can contain more than one Y-family polymerase, each with a unique DNA damage bypass and fidelity profile. For example, humans posses four Y-family polymerases: DNA polymerases kappa, iota, eta and Rev1. Y-family polymerases show no homology to DNA polymerases from the A-, B-, C-, D- or X-families []. The Y-family of DNA polymerases includes the following enzymes:Prokaryotic DNA polymerase IV (DinB) [].Archaeal DinB homologue DNA polymerase IV [].Eukaryotic DinB homologue DNA polymerase kappa [].Prokarytoic DNA repair proteins UmuC and UmuD [].Eukaryotic Rad30 homologues DNA polymerase eta and iota [, ].Eukaryotic DNA repair protein Rev1 [].Human DNA polymerase kappa is a right-handed shaped molecule with palm, fingers, thumb, little finger and wrist subdomains []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Hendel A |
Year: |
2011 |
Journal: |
PLoS Genet |
Title: |
PCNA ubiquitination is important, but not essential for translesion DNA synthesis in mammalian cells. |
Volume: |
7 |
Issue: |
9 |
Pages: |
e1002262 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
261
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
121
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
270
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
623
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Trincao J |
Year: |
2001 |
Journal: |
Mol Cell |
Title: |
Structure of the catalytic core of S. cerevisiae DNA polymerase eta: implications for translesion DNA synthesis. |
Volume: |
8 |
Issue: |
2 |
Pages: |
417-26 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ling H |
Year: |
2001 |
Journal: |
Cell |
Title: |
Crystal structure of a Y-family DNA polymerase in action: a mechanism for error-prone and lesion-bypass replication. |
Volume: |
107 |
Issue: |
1 |
Pages: |
91-102 |
|
•
•
•
•
•
|
Publication |
First Author: |
Uljon SN |
Year: |
2004 |
Journal: |
Structure |
Title: |
Crystal structure of the catalytic core of human DNA polymerase kappa. |
Volume: |
12 |
Issue: |
8 |
Pages: |
1395-404 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bunting KA |
Year: |
2003 |
Journal: |
EMBO J |
Title: |
Structural basis for recruitment of translesion DNA polymerase Pol IV/DinB to the beta-clamp. |
Volume: |
22 |
Issue: |
21 |
Pages: |
5883-92 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nair DT |
Year: |
2006 |
Journal: |
Nat Struct Mol Biol |
Title: |
Hoogsteen base pair formation promotes synthesis opposite the 1,N6-ethenodeoxyadenosine lesion by human DNA polymerase iota. |
Volume: |
13 |
Issue: |
7 |
Pages: |
619-25 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jarosz DF |
Year: |
2007 |
Journal: |
Trends Microbiol |
Title: |
Y-family DNA polymerases in Escherichia coli. |
Volume: |
15 |
Issue: |
2 |
Pages: |
70-7 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
267
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
275
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
717
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
694
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
717
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
674
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
737
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
547
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
556
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
547
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
495
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
533
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
549
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
651
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
737
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
737
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
737
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
467
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
453
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
852
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
772
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
793
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
434
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|