Type |
Details |
Score |
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
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Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
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Title: |
Annotation inferences using phylogenetic trees |
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
128
 |
Fragment?: |
false |
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Gene |
Type: |
gene |
Organism: |
frog, African clawed |
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Gene |
Type: |
gene |
Organism: |
frog, African clawed |
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GXD Expression |
Probe: |
MGI:1932050 |
Assay Type: |
RNA in situ |
Annotation Date: |
2008-02-27 |
Strength: |
Strong |
Sex: |
Not Specified |
Emaps: |
EMAPS:1675215 |
Pattern: |
Regionally restricted |
Stage: |
TS15 |
Assay Id: |
MGI:3772244 |
Age: |
embryonic day 9.5 |
Image: |
2F' |
Note: |
Mesp2 and Ripply2 are strongly coexpressed in prospective somite S-I. |
Specimen Label: |
2F' |
Detected: |
true |
Specimen Num: |
2 |
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•
•
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DO Term |
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GXD Expression |
Probe: |
MGI:26559 |
Assay Type: |
RNA in situ |
Annotation Date: |
2008-02-27 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1675215 |
Pattern: |
Regionally restricted |
Stage: |
TS15 |
Assay Id: |
MGI:3772241 |
Age: |
embryonic day 9.5 |
Image: |
2B |
Note: |
Expression is in the anterior presomitic mesoderm. This exression overlaps with Ripply2 expression in the rostral most region of prospective somite S-I. |
Specimen Label: |
2B |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3582769 |
Assay Type: |
RNA in situ |
Annotation Date: |
2008-02-27 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1675215 |
Pattern: |
Graded |
Stage: |
TS15 |
Assay Id: |
MGI:3772240 |
Age: |
embryonic day 9.5 |
Image: |
2C |
Note: |
Expression is in the posterior presomitic mesoderm. T expression gradually fades to low levels posterior to the Ripply2 domain in prospective somite S-I. |
Specimen Label: |
2C |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1276421 |
Assay Type: |
RNA in situ |
Annotation Date: |
2008-02-27 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1675215 |
Pattern: |
Regionally restricted |
Stage: |
TS15 |
Assay Id: |
MGI:3772245 |
Age: |
embryonic day 9.5 |
Image: |
2E |
Note: |
Expression is in stripes in the anterior presomitic mesoderm. Ripply2 is coexpressed with these anterior stripes of Lfng mRNA in prospective somites S-I and S0. |
Specimen Label: |
2E |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1194749 |
Assay Type: |
RNA in situ |
Annotation Date: |
2008-02-27 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1675215 |
Pattern: |
Regionally restricted |
Stage: |
TS15 |
Assay Id: |
MGI:3772243 |
Age: |
embryonic day 9.5 |
Image: |
2A |
Note: |
Expression is in the caudal half of somites, including the prospective somite S0. The posterior-most domain of Uncx4.1 at the prospective boundary between S0 and S-I overlaps with Ripply2 expression. |
Specimen Label: |
2A |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1194749 |
Assay Type: |
RNA in situ |
Annotation Date: |
2008-02-27 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3116915 |
Pattern: |
Regionally restricted |
Stage: |
TS15 |
Assay Id: |
MGI:3772243 |
Age: |
embryonic day 9.5 |
Image: |
2A |
Note: |
Expression is in the caudal half of somites, including the prospective somite S0. The posterior-most domain of Uncx4.1 at the prospective boundary between S0 and S-I overlaps with Ripply2 expression. |
Specimen Label: |
2A |
Detected: |
true |
Specimen Num: |
1 |
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Publication |
First Author: |
Kawamura A |
Year: |
2008 |
Journal: |
Mol Cell Biol |
Title: |
Activator-to-repressor conversion of T-box transcription factors by the Ripply family of Groucho/TLE-associated mediators. |
Volume: |
28 |
Issue: |
10 |
Pages: |
3236-44 |
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•
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Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
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