Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1797223 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12758 |
|
Specimen Label: |
GUDMAP:12758 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3820985 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1794223 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827779 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_007942_06 |
|
Specimen Label: |
euxassay_007942_06 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3820985 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1794223 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827779 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_007942_19 |
|
Specimen Label: |
euxassay_007942_19 |
Detected: |
true |
Specimen Num: |
18 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3820985 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1683323 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827779 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_007942_13 |
|
Specimen Label: |
euxassay_007942_13 |
Detected: |
true |
Specimen Num: |
12 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1832123 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:6421 |
|
Specimen Label: |
GUDMAP:6421 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1832123 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12757 |
|
Specimen Label: |
GUDMAP:12757 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1832123 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12758 |
|
Specimen Label: |
GUDMAP:12758 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:2835527 |
Pattern: |
Not Specified |
Stage: |
TS27 |
Assay Id: |
MGI:5539968 |
Age: |
postnatal day 0 |
Image: |
GUDMAP:7728 |
|
Specimen Label: |
GUDMAP:7728 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2851823 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:6421 |
|
Specimen Label: |
GUDMAP:6421 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2851823 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12757 |
|
Specimen Label: |
GUDMAP:12757 |
Detected: |
false |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2851823 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12758 |
|
Specimen Label: |
GUDMAP:12758 |
Detected: |
false |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7596162 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-23 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3262722 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:7596256 |
Age: |
embryonic day 14.5 |
|
Note: |
Expression restricted to ectoderm. |
Specimen Label: |
2h Rnf43/Rspo2 (upper) |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7596162 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-02-23 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3262722 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:7596256 |
Age: |
embryonic day 14.5 |
|
Note: |
Expression restricted to ectoderm. |
Specimen Label: |
2h Rnf43/Rspo2 (lower) |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2760523 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:6421 |
|
Specimen Label: |
GUDMAP:6421 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:2760527 |
Pattern: |
Not Specified |
Stage: |
TS27 |
Assay Id: |
MGI:5539968 |
Age: |
postnatal day 0 |
Image: |
GUDMAP:7728 |
|
Specimen Label: |
GUDMAP:7728 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2760523 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12757 |
|
Specimen Label: |
GUDMAP:12757 |
Detected: |
false |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2760523 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12758 |
|
Specimen Label: |
GUDMAP:12758 |
Detected: |
false |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3820985 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1702123 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827779 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_007942_02 |
|
Specimen Label: |
euxassay_007942_02 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3820985 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1702123 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827779 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_007942_03 |
|
Specimen Label: |
euxassay_007942_03 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3820985 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1702123 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827779 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_007942_04 |
|
Specimen Label: |
euxassay_007942_04 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3820985 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1702123 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827779 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_007942_05 |
|
Specimen Label: |
euxassay_007942_05 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3820985 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1702123 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827779 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_007942_06 |
|
Specimen Label: |
euxassay_007942_06 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3820985 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1702123 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4827779 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_007942_07 |
|
Specimen Label: |
euxassay_007942_07 |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2852723 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:6421 |
|
Specimen Label: |
GUDMAP:6421 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2852723 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12757 |
|
Specimen Label: |
GUDMAP:12757 |
Detected: |
false |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2852723 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12758 |
|
Specimen Label: |
GUDMAP:12758 |
Detected: |
false |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2874723 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:6421 |
|
Specimen Label: |
GUDMAP:6421 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2874723 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12757 |
|
Specimen Label: |
GUDMAP:12757 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2850023 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:6421 |
|
Specimen Label: |
GUDMAP:6421 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2850023 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12757 |
|
Specimen Label: |
GUDMAP:12757 |
Detected: |
false |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2850023 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12758 |
|
Specimen Label: |
GUDMAP:12758 |
Detected: |
false |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796223 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:6421 |
|
Specimen Label: |
GUDMAP:6421 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3507006 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796223 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539968 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12757 |
|
Specimen Label: |
GUDMAP:12757 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lu C |
Year: |
2022 |
Journal: |
Stem Cell Reports |
Title: |
RNF43/ZNRF3 negatively regulates taste tissue homeostasis and positively regulates dorsal lingual epithelial tissue homeostasis. |
Volume: |
17 |
Issue: |
2 |
Pages: |
369-383 |
|
•
•
•
•
•
|
Publication |
First Author: |
Flanagan DJ |
Year: |
2021 |
Journal: |
Nature |
Title: |
NOTUM from Apc-mutant cells biases clonal competition to initiate cancer. |
Volume: |
594 |
Issue: |
7863 |
Pages: |
430-435 |
|
•
•
•
•
•
|
Publication |
First Author: |
Planas-Paz L |
Year: |
2016 |
Journal: |
Nat Cell Biol |
Title: |
The RSPO-LGR4/5-ZNRF3/RNF43 module controls liver zonation and size. |
Volume: |
18 |
Issue: |
5 |
Pages: |
467-79 |
|
•
•
•
•
•
|
Publication |
First Author: |
Harris A |
Year: |
2018 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
ZNRF3 functions in mammalian sex determination by inhibiting canonical WNT signaling. |
Volume: |
115 |
Issue: |
21 |
Pages: |
5474-5479 |
|
•
•
•
•
•
|
Publication |
First Author: |
Vidal VP |
Year: |
2020 |
Journal: |
Elife |
Title: |
R-spondin signalling is essential for the maintenance and differentiation of mouse nephron progenitors. |
Volume: |
9 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Takada Y |
Year: |
2016 |
Journal: |
Development |
Title: |
Brg1 plays an essential role in development and homeostasis of the duodenum through regulation of Notch signaling. |
Volume: |
143 |
Issue: |
19 |
Pages: |
3532-3539 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sigal M |
Year: |
2017 |
Journal: |
Nature |
Title: |
Stromal R-spondin orchestrates gastric epithelial stem cells and gland homeostasis. |
Volume: |
548 |
Issue: |
7668 |
Pages: |
451-455 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhou Q |
Year: |
2007 |
Journal: |
Dev Cell |
Title: |
A multipotent progenitor domain guides pancreatic organogenesis. |
Volume: |
13 |
Issue: |
1 |
Pages: |
103-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shanghai Model Organisms Center |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hoffman BG |
Year: |
2008 |
Journal: |
Genome Biol |
Title: |
Identification of transcripts with enriched expression in the developing and adult pancreas. |
Volume: |
9 |
Issue: |
6 |
Pages: |
R99 |
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•
•
•
•
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Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
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Title: |
Gene Ontology annotation based on UniPathway vocabulary mapping |
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Publication |
First Author: |
Wiese CB |
Year: |
2012 |
Journal: |
Front Neurosci |
Title: |
A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract. |
Volume: |
6 |
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Pages: |
130 |
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Publication |
First Author: |
MGI and IMPC |
Year: |
2018 |
Journal: |
Database Release |
Title: |
MGI Load of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
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Publication |
First Author: |
Gray PA |
Year: |
2004 |
Journal: |
Science |
Title: |
Mouse brain organization revealed through direct genome-scale TF expression analysis. |
Volume: |
306 |
Issue: |
5705 |
Pages: |
2255-7 |
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•
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Publication |
First Author: |
Velocigene |
Year: |
2008 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
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•
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Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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•
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•
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Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
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•
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•
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Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
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Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
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•
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Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
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•
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Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
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Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
2022 |
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Title: |
Cyagen Biosciences Website. |
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Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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•
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•
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•
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Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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•
•
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•
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Publication |
First Author: |
GOA curators |
Year: |
2016 |
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Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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•
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Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
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•
•
•
•
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Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
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Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
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Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
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Title: |
Annotation inferences using phylogenetic trees |
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•
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•
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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•
•
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•
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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•
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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•
•
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
91
 |
Fragment?: |
true |
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•
•
•
•
•
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UniProt Feature |
Begin: |
24 |
Description: |
E3 ubiquitin-protein ligase RNF43 |
Type: |
chain |
End: |
784 |
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•
•
•
•
•
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Publication |
First Author: |
Tsukiyama T |
Year: |
2015 |
Journal: |
Mol Cell Biol |
Title: |
Molecular Role of RNF43 in Canonical and Noncanonical Wnt Signaling. |
Volume: |
35 |
Issue: |
11 |
Pages: |
2007-23 |
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•
•
•
•
•
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Publication |
First Author: |
Niu J |
Year: |
2021 |
Journal: |
Neuron |
Title: |
Oligodendroglial ring finger protein Rnf43 is an essential injury-specific regulator of oligodendrocyte maturation. |
Volume: |
109 |
Issue: |
19 |
Pages: |
3104-3118.e6 |
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•
•
•
•
•
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Publication |
First Author: |
Shinada K |
Year: |
2011 |
Journal: |
Biochem Biophys Res Commun |
Title: |
RNF43 interacts with NEDL1 and regulates p53-mediated transcription. |
Volume: |
404 |
Issue: |
1 |
Pages: |
143-7 |
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•
•
•
•
•
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Publication |
First Author: |
Giannakis M |
Year: |
2014 |
Journal: |
Nat Genet |
Title: |
RNF43 is frequently mutated in colorectal and endometrial cancers. |
Volume: |
46 |
Issue: |
12 |
Pages: |
1264-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ryland GL |
Year: |
2013 |
Journal: |
J Pathol |
Title: |
RNF43 is a tumour suppressor gene mutated in mucinous tumours of the ovary. |
Volume: |
229 |
Issue: |
3 |
Pages: |
469-76 |
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•
•
•
•
•
|
Allele |
Name: |
ring finger protein 43; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
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•
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•
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Strain |
Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
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•
•
•
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Publication |
First Author: |
Serra S |
Year: |
2018 |
Journal: |
J Clin Pathol |
Title: |
Rnf43. |
Volume: |
71 |
Issue: |
1 |
Pages: |
1-6 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the RING-type zinc finger domain of E3 ubiquitin-protein ligase RNF43. Proteins containing this domain are found in vertebrates. RNF43 acts as a negative regulator of the Wnt signaling pathway by mediating the ubiquitination and subsequent degradation of Wnt receptor complex components Frizzled and LRP6 [, , ]. RNF43 also interacts with NEDD-4-like ubiquitin-protein ligase-1 (NEDL1) and regulates p53-mediated transcription []. It may also be involved in cell growth control potentially through the interaction with, a chromatin-associated protein interfacing the nuclear envelope []. Mutations of RNF43 have been identified in various tumours, including colorectal cancer (CRC), endometrial cancer, mucinous ovarian tumours, gastric adenocarcinoma, pancreatic ductal adenocarcinoma, liver fluke-associated cholangiocarcinoma, hepatocellular carcinoma, and glioma [, , ]. RNF43 contains an N-terminal signal peptide, a protease-associated (PA) domain, a transmembrane (TM) domain and a C3H2C3-type RING-H2 finger domain followed by a long C-terminal region [].In frogs (Xenopus), ZNRF3 and RNF43 were seen to play a key role in limb specification, constituting a master switch along with RSPO2, which may have implications for regenerative medicine []. |
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•
•
•
•
•
|
Publication |
First Author: |
Hao HX |
Year: |
2012 |
Journal: |
Nature |
Title: |
ZNRF3 promotes Wnt receptor turnover in an R-spondin-sensitive manner. |
Volume: |
485 |
Issue: |
7397 |
Pages: |
195-200 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sugiura T |
Year: |
2008 |
Journal: |
Exp Cell Res |
Title: |
A cancer-associated RING finger protein, RNF43, is a ubiquitin ligase that interacts with a nuclear protein, HAP95. |
Volume: |
314 |
Issue: |
7 |
Pages: |
1519-28 |
|
•
•
•
•
•
|
Publication |
First Author: |
Metidji A |
Year: |
2018 |
Journal: |
Immunity |
Title: |
The Environmental Sensor AHR Protects from Inflammatory Damage by Maintaining Intestinal Stem Cell Homeostasis and Barrier Integrity. |
Volume: |
49 |
Issue: |
2 |
Pages: |
353-362.e5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fancy SP |
Year: |
2014 |
Journal: |
Nat Neurosci |
Title: |
Parallel states of pathological Wnt signaling in neonatal brain injury and colon cancer. |
Volume: |
17 |
Issue: |
4 |
Pages: |
506-12 |
|
•
•
•
•
•
|
Publication |
First Author: |
Huang S |
Year: |
2017 |
Journal: |
Cancer Res |
Title: |
DDB2 Is a Novel Regulator of Wnt Signaling in Colon Cancer. |
Volume: |
77 |
Issue: |
23 |
Pages: |
6562-6575 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
657
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
743
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Chan SC |
Year: |
2019 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Hepatocyte nuclear factor-1β regulates Wnt signaling through genome-wide competition with β-catenin/lymphoid enhancer binding factor. |
Volume: |
116 |
Issue: |
48 |
Pages: |
24133-24142 |
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•
•
•
•
•
|
Publication |
First Author: |
Mishra A |
Year: |
2020 |
Journal: |
Carcinogenesis |
Title: |
Generation of focal mutations and large genomic deletions in the pancreas using inducible in vivo genome editing. |
Volume: |
41 |
Issue: |
3 |
Pages: |
334-344 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gyllborg D |
Year: |
2018 |
Journal: |
Stem Cell Reports |
Title: |
The Matricellular Protein R-Spondin 2 Promotes Midbrain Dopaminergic Neurogenesis and Differentiation. |
Volume: |
11 |
Issue: |
3 |
Pages: |
651-664 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zebisch M |
Year: |
2015 |
Journal: |
J Struct Biol |
Title: |
Crystal structure of R-spondin 2 in complex with the ectodomains of its receptors LGR5 and ZNRF3. |
Volume: |
191 |
Issue: |
2 |
Pages: |
149-55 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ayadi L |
Year: |
2008 |
Journal: |
Bioinformation |
Title: |
Molecular modelling of the TSR domain of R-spondin 4. |
Volume: |
3 |
Issue: |
3 |
Pages: |
119-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Blaydon DC |
Year: |
2006 |
Journal: |
Nat Genet |
Title: |
The gene encoding R-spondin 4 (RSPO4), a secreted protein implicated in Wnt signaling, is mutated in inherited anonychia. |
Volume: |
38 |
Issue: |
11 |
Pages: |
1245-7 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
The R-spondin (RSPO) family is a small group of four secreted proteins (RSPO1-RSPO4) that have pleiotropic functions in development and stem cell growth by strongly enhancing Wnt pathway activation. They contain an N-terminal secretory signal peptide sequence, two tandem furin-like cysteine-rich (Fu-CRD) domains, a thrombospondin type I repeat (TSP) domain, and a C-terminal basic amino acid-rich (BR) domain. Leucine-rich repeat-containing G-protein-coupled receptor 4 (LGR4), LGR5, and LGR6 have been identified as receptors for RSPOs [].RSPO2 is a secreted protein that belongs to the R-spondin (RSPO) family. Interestingly, it is one of the two members (RSPO2 and RSPO3) of the family capable of potentiating WNT signaling in cells lacking all three LGRs (Leucine-rich repeat-containing G-protein-coupled receptor 4/5/6) []. It plays a crucial role in limb specification, amplifying the Wnt signaling pathway independently of LGR4-6 receptors, possibly by acting as a direct antagonistic ligand to RNF43 and ZNRF3, hence governing the number of limbs an embryo should form []. It has been shown to promote midbrain dopaminergic neurogenesis and differentiation in human stem cells []. Its structures in complex with the ectodomains of its receptors LGR5 and ZNRF3 have been revealed []. RSPO4 is a secreted protein that belongs to the R-spondin (RSPO) family. It has been associated with embryonic nail development [, ]. |
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•
•
•
•
•
|
Publication |
First Author: |
Yan KS |
Year: |
2017 |
Journal: |
Nature |
Title: |
Non-equivalence of Wnt and R-spondin ligands during Lgr5+ intestinal stem-cell self-renewal. |
Volume: |
545 |
Issue: |
7653 |
Pages: |
238-242 |
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•
•
•
•
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