Type |
Details |
Score |
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Publication |
First Author: |
Khanna H |
Year: |
2009 |
Journal: |
Nat Genet |
Title: |
A common allele in RPGRIP1L is a modifier of retinal degeneration in ciliopathies. |
Volume: |
41 |
Issue: |
6 |
Pages: |
739-45 |
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•
•
•
•
•
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Publication |
First Author: |
Coene KL |
Year: |
2011 |
Journal: |
Hum Mol Genet |
Title: |
The ciliopathy-associated protein homologs RPGRIP1 and RPGRIP1L are linked to cilium integrity through interaction with Nek4 serine/threonine kinase. |
Volume: |
20 |
Issue: |
18 |
Pages: |
3592-605 |
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DO Term |
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DO Term |
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Allele |
Name: |
Rpgrip1-like; targeted mutation 1, Ulrich Ruther |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout |
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•
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•
•
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Genotype |
Symbol: |
Rpgrip1l/Rpgrip1l |
Background: |
involves: 129S1/Sv * 129X1/SvJ |
Zygosity: |
hm |
Has Mutant Allele: |
true |
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•
•
•
•
•
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Allele |
Name: |
FTO alpha-ketoglutarate dependent dioxygenase; targeted mutation 1, Ulrich Ruther |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout |
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•
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Publication |
First Author: |
Fischer J |
Year: |
2009 |
Journal: |
Nature |
Title: |
Inactivation of the Fto gene protects from obesity. |
Volume: |
458 |
Issue: |
7240 |
Pages: |
894-8 |
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•
•
•
•
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Publication |
First Author: |
Tews D |
Year: |
2013 |
Journal: |
Endocrinology |
Title: |
FTO deficiency induces UCP-1 expression and mitochondrial uncoupling in adipocytes. |
Volume: |
154 |
Issue: |
9 |
Pages: |
3141-51 |
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•
•
•
•
•
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Publication |
First Author: |
Carnevali L |
Year: |
2014 |
Journal: |
PLoS One |
Title: |
Signs of cardiac autonomic imbalance and proarrhythmic remodeling in FTO deficient mice. |
Volume: |
9 |
Issue: |
4 |
Pages: |
e95499 |
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•
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•
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Publication |
First Author: |
Boissel S |
Year: |
2009 |
Journal: |
Am J Hum Genet |
Title: |
Loss-of-function mutation in the dioxygenase-encoding FTO gene causes severe growth retardation and multiple malformations. |
Volume: |
85 |
Issue: |
1 |
Pages: |
106-11 |
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•
•
•
•
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Publication |
First Author: |
Spychala A |
Year: |
2019 |
Journal: |
PLoS One |
Title: |
FTO affects hippocampal function by regulation of BDNF processing. |
Volume: |
14 |
Issue: |
2 |
Pages: |
e0211937 |
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•
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•
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Publication |
First Author: |
Gulati P |
Year: |
2013 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Role for the obesity-related FTO gene in the cellular sensing of amino acids. |
Volume: |
110 |
Issue: |
7 |
Pages: |
2557-62 |
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•
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Genotype |
Symbol: |
Fto/Fto |
Background: |
involves: 129S1/Sv * 129X1/SvJ * C57BL/6 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
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•
•
•
•
•
|
Genotype |
Symbol: |
Fto/Fto<+> |
Background: |
involves: 129S1/Sv * 129X1/SvJ * C57BL/6 |
Zygosity: |
ht |
Has Mutant Allele: |
true |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
289
 |
Fragment?: |
false |
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•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
191
 |
Fragment?: |
true |
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
553
 |
Fragment?: |
false |
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
91
 |
Fragment?: |
true |
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•
•
•
•
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Publication |
First Author: |
Remans K |
Year: |
2014 |
Journal: |
Cell Rep |
Title: |
C2 domains as protein-protein interaction modules in the ciliary transition zone. |
Volume: |
8 |
Issue: |
1 |
Pages: |
1-9 |
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•
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•
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Publication |
First Author: |
Arts HH |
Year: |
2007 |
Journal: |
Nat Genet |
Title: |
Mutations in the gene encoding the basal body protein RPGRIP1L, a nephrocystin-4 interactor, cause Joubert syndrome. |
Volume: |
39 |
Issue: |
7 |
Pages: |
882-8 |
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•
•
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•
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Publication |
First Author: |
Castagnet P |
Year: |
2003 |
Journal: |
Hum Mol Genet |
Title: |
RPGRIP1s with distinct neuronal localization and biochemical properties associate selectively with RanBP2 in amacrine neurons. |
Volume: |
12 |
Issue: |
15 |
Pages: |
1847-63 |
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•
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•
•
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Publication |
First Author: |
Devuyst O |
Year: |
2008 |
Journal: |
Nephrol Dial Transplant |
Title: |
Mutations in RPGRIP1L: extending the clinical spectrum of ciliopathies. |
Volume: |
23 |
Issue: |
5 |
Pages: |
1500-3 |
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•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
RPGR-interacting protein 1 (RPGRIP1) is mutated in the eye disease Leber congenital amaurosis (LCA) and its structural homologue, RPGRIP1-like (RPGRIP1L, also called NPHP8 or fantom), is mutated in many different ciliopathies [, ]. Both are multidomain proteins that are predicted to interact with retinitis pigmentosa G-protein regulator (RPGR) []. Both consist of an N-terminal coiled coil domain, two C2 domains (C2N and C2C), and a C-terminal RPGR-interacting domain (RID). RID is a C2 domain with a canonical beta sandwich structure that does not bind Ca2+ and/or phospholipids and thus constitutes a unique type of protein-protein interaction module [].Both RPGRIP1 and RPGRIP1L interact with the ciliary transition zone protein nephrocystin 4 (NPHP4) via their C2C domain [, ]. An hypothesis is that RPGRIP1 and RPGRIP1L function as cilium-specific scaffolds that recruit a Nek4 signaling network which regulates cilium stability []. The expression of RPGRIP1 seems to be limited to photoreceptors and amacrine cells in the retina [], whereas RPGRIP1L is found in other tissues as well. |
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•
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Publication |
First Author: |
Ikels K |
Year: |
2014 |
Journal: |
PLoS One |
Title: |
FTO is a relevant factor for the development of the metabolic syndrome in mice. |
Volume: |
9 |
Issue: |
8 |
Pages: |
e105349 |
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•
•
•
•
•
|
Genotype |
Symbol: |
Fto/Fto Lep/Lep |
Background: |
involves: 129S1/Sv * 129X1/SvJ * C57BL/6J |
Zygosity: |
cx |
Has Mutant Allele: |
true |
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•
•
•
•
•
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Publication |
First Author: |
Uzquiano A |
Year: |
2019 |
Journal: |
Cell Rep |
Title: |
Mutations in the Heterotopia Gene Eml1/EML1 Severely Disrupt the Formation of Primary Cilia. |
Volume: |
28 |
Issue: |
6 |
Pages: |
1596-1611.e10 |
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•
•
•
•
•
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Publication |
First Author: |
Shi X |
Year: |
2017 |
Journal: |
Nat Cell Biol |
Title: |
Super-resolution microscopy reveals that disruption of ciliary transition-zone architecture causes Joubert syndrome. |
Volume: |
19 |
Issue: |
10 |
Pages: |
1178-1188 |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
71
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
201
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
82
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
295
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Ruud J |
Year: |
2019 |
Journal: |
Cell Rep |
Title: |
The Fat Mass and Obesity-Associated Protein (FTO) Regulates Locomotor Responses to Novelty via D2R Medium Spiny Neurons. |
Volume: |
27 |
Issue: |
11 |
Pages: |
3182-3198.e9 |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1331
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1126
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1127
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1320
 |
Fragment?: |
false |
|
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•
•
•
•
|