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Search results 101 to 168 out of 168 for Rpp14

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0.022s
Type Details Score
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1646922
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1736222
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1683322
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1700022
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1832122
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1876522
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Note: Expression was detected in the immune system.
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1741222
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1754022
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:3599822
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:3280922
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1833322
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:3287022
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1752522
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1821522
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:3557722
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1702122
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1756322
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression      
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1668822
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Specimen Label: MH1490; Specimen C1536
Detected: false
Specimen Num: 1
GXD Expression  
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Moderate
Sex: Not Specified
Emaps: EMAPS:1757722
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
GXD Expression      
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1757522
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Specimen Label: MH1490; Specimen C1536
Detected: false
Specimen Num: 1
GXD Expression      
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1738322
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Specimen Label: MH1490; Specimen C1536
Detected: false
Specimen Num: 1
GXD Expression      
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1802422
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Specimen Label: MH1490; Specimen C1536
Detected: false
Specimen Num: 1
GXD Expression    
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1768022
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Note: Expression was not detected in the skull (base and vault).
Specimen Label: MH1490; Specimen C1536
Detected: false
Specimen Num: 1
GXD Expression
Probe: MGI:3724896
Assay Type: RNA in situ
Annotation Date: 2012-06-12
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:2672022
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:5421547
Age: embryonic day 14.5
Image: MH1490; Specimen C1536
Note: Expression was weak in whisker follicle.
Specimen Label: MH1490; Specimen C1536
Detected: true
Specimen Num: 1
Publication  
First Author: Xiao S
Year: 2002
Journal: Annu Rev Biochem
Title: Eukaryotic ribonuclease P: a plurality of ribonucleoprotein enzymes.
Volume: 71
Pages: 165-89
Publication        
First Author: Mouse Genome Informatics Scientfic Curators
Year: 2013
Title: Curated associations of genes in MGI and UniProt sequence records
Publication
First Author: Hoffman BG
Year: 2008
Journal: Genome Biol
Title: Identification of transcripts with enriched expression in the developing and adult pancreas.
Volume: 9
Issue: 6
Pages: R99
Publication
First Author: Visel A
Year: 2004
Journal: Nucleic Acids Res
Title: GenePaint.org: an atlas of gene expression patterns in the mouse embryo.
Volume: 32
Issue: Database issue
Pages: D552-6
Publication      
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
Publication      
First Author: Wellcome Trust Sanger Institute
Year: 2009
Journal: MGI Direct Data Submission
Title: Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute
Publication
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
Publication        
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
Publication
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
Publication        
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
Publication      
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
Publication
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
Publication        
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
Publication        
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
Publication      
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
Publication      
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
Publication      
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
Publication      
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
Publication      
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
Publication
First Author: Jarrous N
Year: 1999
Journal: RNA
Title: Rpp14 and Rpp29, two protein subunits of human ribonuclease P.
Volume: 5
Issue: 2
Pages: 153-7
Protein
Organism: Mus musculus/domesticus
Length: 150  
Fragment?: false
Protein
Organism: Mus musculus/domesticus
Length: 51  
Fragment?: true
Publication
First Author: Jarrous N
Year: 2001
Journal: RNA
Title: Function and subnuclear distribution of Rpp21, a protein subunit of the human ribonucleoprotein ribonuclease P.
Volume: 7
Issue: 8
Pages: 1153-64
Publication
First Author: Cai T
Year: 1999
Journal: Mol Cell Biol
Title: Mutagenesis of SNM1, which encodes a protein component of the yeast RNase MRP, reveals a role for this ribonucleoprotein endoribonuclease in plasmid segregation.
Volume: 19
Issue: 11
Pages: 7857-69
Publication
First Author: Houser-Scott F
Year: 2002
Journal: Proc Natl Acad Sci U S A
Title: Interactions among the protein and RNA subunits of Saccharomyces cerevisiae nuclear RNase P.
Volume: 99
Issue: 5
Pages: 2684-9
Protein Domain
Type: Family
Description: This entry contains ribonuclease P (Rnp) proteins from eukaryotes and archaea. Rnp is a ubiquitous ribozyme that catalyzes a Mg2 -dependent hydrolysis to remove the 5'-leader sequence of precursor tRNA (pre-tRNA) [, ]. Archaeal and eukaryotic RNase P consist of a single RNA and archaeal RNase P has four or five proteins, while eukaryotic RNase P consists of 9 or 10 proteins. Eukaryotic and archaeal RNase P RNAs cooperatively function with protein subunits in catalysis []. Human RNase P is composed of a singular protein Pop1 and three subcomplexes, the Rpp20-Rpp25 heterodimer, Pop5-Rpp14-(Rpp30)2-Rpp40 heteropentamer, and Rpp21-Rpp29-Rpp38 heterotrimer. Although both Pop5 and Rpp14 have similar protein structure, they share a very limited sequence similarity. Moreover, the C-terminal fragments after the conserved beta sheets in Pop5 and Rpp14 exhibit distinct structural features that mediate interactions with Pop1 and Rpp40, respectively [].In the hyperthermophilic archaeon Pyrococcus horikoshii OT3, RNase P is composed of the RNase P RNA (pRNA) and five proteins (PhoPop5, PhoRpp38, PhoRpp21, PhoRpp29, and PhoRpp30) [, ].This entry includes Rpp21 from animals, Snm1/Rpr2 from yeasts and RNP4 from archaea [, ]. Snm1 is a subunit of RNase MRP (mitochondrial RNA processing), a ribonucleoprotein endoribonuclease that has roles in both mitochondrial DNA replication and nuclear 5.8S rRNA processing. Snm1 is an RNA binding protein that binds the MRP RNA specifically []. This subunit possibly binds the precursor tRNA [].
Protein Domain
Type: Family
Description: This entry contains ribonuclease P (Rnp) proteins from eukaryotes and archaea. Rnp is a ubiquitous ribozyme that catalyzes a Mg2 -dependent hydrolysis to remove the 5'-leader sequence of precursor tRNA (pre-tRNA) [, ]. Archaeal and eukaryotic RNase P consist of a single RNA and archaeal RNase P has four or five proteins, while eukaryotic RNase P consists of 9 or 10 proteins. Eukaryotic and archaeal RNase P RNAs cooperatively function with protein subunits in catalysis []. Human RNase P is composed of a singular protein Pop1 and three subcomplexes, the Rpp20-Rpp25 heterodimer, Pop5-Rpp14-(Rpp30)2-Rpp40 heteropentamer, and Rpp21-Rpp29-Rpp38 heterotrimer. Although both Pop5 and Rpp14 have similar protein structure, they share a very limited sequence similarity. Moreover, the C-terminal fragments after the conserved beta sheets in Pop5 and Rpp14 exhibit distinct structural features that mediate interactions with Pop1 and Rpp40, respectively [].In the hyperthermophilic archaeon Pyrococcus horikoshii OT3, RNase P is composed of the RNase P RNA (pRNA) and five proteins (PhoPop5, PhoRpp38, PhoRpp21, PhoRpp29, and PhoRpp30) [, ].Proteins in this entry include Rnp2 (also known as Pop5) from archaea and Pop5/Rpp14 from humans [].
Protein
Organism: Mus musculus/domesticus
Length: 122  
Fragment?: false
Publication  
First Author: Lan P
Year: 2018
Journal: Science
Title: Structural insight into precursor tRNA processing by yeast ribonuclease P.
Volume: 362
Issue: 6415
Protein Domain
Type: Homologous_superfamily
Description: This superfamily contains ribonuclease P (Rnp) proteins from eukaryotes and archaea. Rnp is a ubiquitous ribozyme that catalyzes a Mg2+-dependent hydrolysis to remove the 5'-leader sequence of precursor tRNA (pre-tRNA) []. Archaeal and eukaryote RNase P consist of a single RNA and archaeal RNase P has four or five proteins, while eukaryotic RNase P consists of 9 or 10 proteins. Eukaryotic and archaeal RNase P RNAs cooperatively function with protein subunits in catalysis []. Eukaryotic nuclear RNase P shares most of its protein components with another essential RNP enzyme, nucleolar RNase MRP []. RNase MRP (mitochondrial RNA processing) is an rRNA processing enzyme that cleaves a specific site within precursor rRNA to generate the mature 5'-end of 5.8S rRNA []. Despite its name, the vast majority of RNase MRP is localized in the nucleolus []. RNase MRP has been shown to cleave primers for mitochondrial DNA replication and CLB2 mRNA. In yeast, RNase MRP possesses one putatively catalytic RNA and at least 9 protein subunits (Pop1, Pop3-Pop8, Rpp1, Snm1 and Rmp1) [].Human RNase P is composed of a singular protein Pop1 and three subcomplexes, the Rpp20-Rpp25 heterodimer, Pop5-Rpp14-(Rpp30)2-Rpp40 heteropentamer, and Rpp21-Rpp29-Rpp38 heterotrimer [].In the hyperthermophilic archaeon Pyrococcus horikoshii OT3, RNase P is composed of the RNase P RNA (pRNA) and five proteins (PhoPop5, PhoRpp38, PhoRpp21, PhoRpp29, and PhoRpp30) [, ].Proteins in this entry include Rnp2 (also known as Pop5) from archaea and Pop5/Rpp14 from humans. In eukaryotes Pop5 is a subunit of both the Rnp and MRP complexes. Although both Pop5 and Rpp14 have similar protein structure, they share a very limited sequence similarity. Moreover, the C-terminal fragments after the conserved beta sheets in Pop5 and Rpp14 exhibit distinct structural features that mediate interactions with Pop1 and Rpp40, respectively [].The structure of Rnp2 (ribonuclease P protein component 2) has a ferrodoxin-like fold composed of an α-β sandwich with antiparallel β-sheet and contains an extra C-terminal helix.
Publication
First Author: Terada A
Year: 2006
Journal: J Biochem
Title: Characterization of the archaeal ribonuclease P proteins from Pyrococcus horikoshii OT3.
Volume: 140
Issue: 2
Pages: 293-8
Publication
First Author: Kimura M
Year: 2017
Journal: Biosci Biotechnol Biochem
Title: Structural basis for activation of an archaeal ribonuclease P RNA by protein cofactors.
Volume: 81
Issue: 9
Pages: 1670-1680
Protein
Organism: Mus musculus/domesticus
Length: 169  
Fragment?: false
Publication
First Author: Bussey H
Year: 1995
Journal: Proc Natl Acad Sci U S A
Title: The nucleotide sequence of chromosome I from Saccharomyces cerevisiae.
Volume: 92
Issue: 9
Pages: 3809-13
Publication
First Author: Walker SC
Year: 2005
Journal: Biochem Soc Trans
Title: Probing the structure of Saccharomyces cerevisiae RNase MRP.
Volume: 33
Issue: Pt 3
Pages: 479-81
Publication
First Author: Marvin MC
Year: 2011
Journal: RNA
Title: Accumulation of noncoding RNA due to an RNase P defect in Saccharomyces cerevisiae.
Volume: 17
Issue: 8
Pages: 1441-50
Publication
First Author: Esakova O
Year: 2010
Journal: RNA
Title: Of proteins and RNA: the RNase P/MRP family.
Volume: 16
Issue: 9
Pages: 1725-47
Publication
First Author: Gopalan V
Year: 2018
Journal: RNA
Title: Chance and necessity in the evolution of RNase P.
Volume: 24
Issue: 1
Pages: 1-5