Type |
Details |
Score |
Allele |
Name: |
SEC62 homolog, preprotein translocation; gene trap W038C03, German Gene Trap Consortium |
Allele Type: |
Gene trapped |
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Allele |
Name: |
SEC62 homolog, preprotein translocation; gene trap IST14317B11, Texas A&M Institute for Genomic Medicine |
Allele Type: |
Gene trapped |
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Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
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Genotype |
Symbol: |
Sec62/Sec62 |
Background: |
C57BL/6NJ-Sec62/Mmjax |
Zygosity: |
hm |
Has Mutant Allele: |
true |
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Genotype |
Symbol: |
Sec62/Sec62<+> |
Background: |
C57BL/6NJ-Sec62/Mmjax |
Zygosity: |
ht |
Has Mutant Allele: |
true |
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Protein Domain |
Type: |
Family |
Description: |
Members of the NSCC2 family have been sequenced from various fungal and animal species including Saccharomyces cerevisiae, Drosophila melanogaster and Homo sapiens. These proteins are the Sec62 proteins, believed to be associated with the Sec61 and Sec63 constituents of the general protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins have been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.This family of Sec62 proteins is restricted to the Ascomycota. |
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Publication |
First Author: |
Young BP |
Year: |
2001 |
Journal: |
EMBO J |
Title: |
Sec63p and Kar2p are required for the translocation of SRP-dependent precursors into the yeast endoplasmic reticulum in vivo. |
Volume: |
20 |
Issue: |
1-2 |
Pages: |
262-71 |
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Publication |
First Author: |
Skowronek MH |
Year: |
1999 |
Journal: |
Biol Chem |
Title: |
Molecular characterization of a novel mammalian DnaJ-like Sec63p homolog. |
Volume: |
380 |
Issue: |
9 |
Pages: |
1133-8 |
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Publication |
First Author: |
Davila S |
Year: |
2004 |
Journal: |
Nat Genet |
Title: |
Mutations in SEC63 cause autosomal dominant polycystic liver disease. |
Volume: |
36 |
Issue: |
6 |
Pages: |
575-7 |
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Protein Domain |
Type: |
Family |
Description: |
In Saccharomyces cerevisiae, Sec63 is a component of the Sec62/63 complex (includes Sec63p, Sec62p, Sec66p and Sec72p), which is involved in SRP-independent post-translational translocation across the endoplasmic reticulum (ER) and functions together with the Sec61 complex and KAR2 in a channel-forming translocon complex []. In humans, Sec63 is part of the multicomponent translocon that contains the trimeric SEC61 complex, SEC62 and SEC63. It is required for integral membrane and secreted preprotein translocation across the endoplasmic reticulum membrane [, ].Defects in SEC63 are a cause of polycystic liver disease (PCLD). PCLD is an autosomal dominant disorder and is characterised by the presence of multiple liver cysts of biliary epithelial origin []. |
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Publication |
First Author: |
Lee J |
Year: |
2007 |
Journal: |
Mol Cell Proteomics |
Title: |
Mitochondrial phosphoproteome revealed by an improved IMAC method and MS/MS/MS. |
Volume: |
6 |
Issue: |
4 |
Pages: |
669-76 |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
516
 |
Fragment?: |
true |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
760
 |
Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
760
 |
Fragment?: |
false |
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Publication |
First Author: |
Zhou H |
Year: |
2008 |
Journal: |
J Proteome Res |
Title: |
Specific phosphopeptide enrichment with immobilized titanium ion affinity chromatography adsorbent for phosphoproteome analysis. |
Volume: |
7 |
Issue: |
9 |
Pages: |
3957-67 |
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Publication |
First Author: |
Trost M |
Year: |
2009 |
Journal: |
Immunity |
Title: |
The phagosomal proteome in interferon-gamma-activated macrophages. |
Volume: |
30 |
Issue: |
1 |
Pages: |
143-54 |
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Publication |
First Author: |
Villén J |
Year: |
2007 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Large-scale phosphorylation analysis of mouse liver. |
Volume: |
104 |
Issue: |
5 |
Pages: |
1488-93 |
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Publication |
First Author: |
Carninci P |
Year: |
2000 |
Journal: |
Genome Res |
Title: |
Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. |
Volume: |
10 |
Issue: |
10 |
Pages: |
1617-30 |
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Publication |
First Author: |
Carninci P |
Year: |
1999 |
Journal: |
Methods Enzymol |
Title: |
High-efficiency full-length cDNA cloning. |
Volume: |
303 |
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Pages: |
19-44 |
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Publication |
First Author: |
Shibata K |
Year: |
2000 |
Journal: |
Genome Res |
Title: |
RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. |
Volume: |
10 |
Issue: |
11 |
Pages: |
1757-71 |
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Publication |
First Author: |
Katayama S |
Year: |
2005 |
Journal: |
Science |
Title: |
Antisense transcription in the mammalian transcriptome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1564-6 |
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Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
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Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
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Publication |
First Author: |
Huttlin EL |
Year: |
2010 |
Journal: |
Cell |
Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
Volume: |
143 |
Issue: |
7 |
Pages: |
1174-89 |
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