Type |
Details |
Score |
Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
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•
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
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Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
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Title: |
Annotation inferences using phylogenetic trees |
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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•
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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•
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•
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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•
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•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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•
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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•
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
•
•
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Gene |
Type: |
gene |
Organism: |
chimpanzee |
|
•
•
•
•
•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
626
 |
Fragment?: |
true |
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•
•
•
•
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Publication |
First Author: |
Ponting CP |
Year: |
2000 |
Journal: |
Biochem J |
Title: |
Proteins of the endoplasmic-reticulum-associated degradation pathway: domain detection and function prediction. |
Volume: |
351 Pt 2 |
|
Pages: |
527-35 |
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•
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•
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Publication |
First Author: |
Jermy AJ |
Year: |
2006 |
Journal: |
J Biol Chem |
Title: |
The Brl domain in Sec63p is required for assembly of functional endoplasmic reticulum translocons. |
Volume: |
281 |
Issue: |
12 |
Pages: |
7899-906 |
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•
•
•
•
•
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Protein Domain |
Type: |
Domain |
Description: |
This domain was named after the yeast Sec63 (or NPL1) (also known as the Brl domain) protein in which it was found. This protein is required for assembly of functional endoplasmic reticulum translocons [, ]. Other yeast proteins containing this domain include pre-mRNA splicing helicase BRR2, HFM1 protein and putative helicases. |
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UniProt Feature |
Begin: |
1 |
Description: |
Translocation protein SEC63 homolog |
Type: |
chain |
End: |
760 |
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•
•
•
•
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Publication |
First Author: |
Müller L |
Year: |
2011 |
Journal: |
FEBS Lett |
Title: |
An interaction between human Sec63 and nucleoredoxin may provide the missing link between the SEC63 gene and polycystic liver disease. |
Volume: |
585 |
Issue: |
4 |
Pages: |
596-600 |
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•
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Gene |
Type: |
gene |
Organism: |
frog, African clawed |
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•
•
•
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Gene |
Type: |
gene |
Organism: |
frog, African clawed |
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Allele |
Name: |
SEC63 homolog, protein translocation regulator; wild type |
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Allele |
Name: |
SEC63 homolog, protein translocation regulator; gene trap CSG271, BayGenomics |
Allele Type: |
Gene trapped |
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•
•
•
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•
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Allele |
Name: |
SEC63 homolog, protein translocation regulator; gene trap OST362830, Lexicon Genetics |
Allele Type: |
Gene trapped |
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•
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•
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Allele |
Name: |
SEC63 homolog, protein translocation regulator; targeted mutation 1, Stefan Somlo |
Allele Type: |
Targeted |
Attribute String: |
Conditional ready, No functional change |
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•
•
•
•
•
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Allele |
Name: |
SEC63 homolog, protein translocation regulator; targeted mutation 1.1, Stefan Somlo |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout |
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•
•
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•
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Publication |
First Author: |
Kurihara T |
Year: |
1993 |
Journal: |
Mol Biol Cell |
Title: |
Suppression of a sec63 mutation identifies a novel component of the yeast endoplasmic reticulum translocation apparatus. |
Volume: |
4 |
Issue: |
9 |
Pages: |
919-30 |
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•
•
•
•
•
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Allele |
Name: |
SEC63 homolog, protein translocation regulator; gene trap IST14886E2, Texas A&M Institute for Genomic Medicine |
Allele Type: |
Gene trapped |
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•
•
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•
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Allele |
Name: |
SEC63 homolog, protein translocation regulator; targeted mutation 1a, Helmholtz Zentrum Muenchen GmbH |
Allele Type: |
Targeted |
Attribute String: |
Conditional ready, Null/knockout, Reporter |
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•
•
•
•
|
Allele |
Name: |
SEC63 homolog, protein translocation regulator; targeted mutation 1e, Helmholtz Zentrum Muenchen GmbH |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout, Reporter |
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•
•
•
•
|
Allele |
Name: |
SEC63 homolog, protein translocation regulator; targeted mutation 1b, Helmholtz Zentrum Muenchen GmbH |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout, Reporter |
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•
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•
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Allele |
Name: |
SEC63 homolog, protein translocation regulator; endonuclease-mediated mutation 1, GemPharmatech Co., Ltd |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Conditional ready, No functional change |
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•
•
•
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•
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Allele |
Name: |
SEC63 homolog, protein translocation regulator; endonuclease-mediated mutation 2, GemPharmatech Co., Ltd |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
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•
•
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•
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Genotype |
Symbol: |
Sec63/Sec63 |
Background: |
involves: 129 * C57BL/6 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
428
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Willer M |
Year: |
2003 |
Journal: |
Yeast |
Title: |
Identification of novel protein-protein interactions at the cytosolic surface of the Sec63 complex in the yeast ER membrane. |
Volume: |
20 |
Issue: |
2 |
Pages: |
133-48 |
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•
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•
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Strain |
Attribute String: |
mutant strain, coisogenic, targeted mutation |
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•
•
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•
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Strain |
Attribute String: |
coisogenic, targeted mutation |
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•
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Genotype |
Symbol: |
Sec63/Sec63 Tg(CAG-cre/Esr1*)1Lbe/? |
Background: |
involves: 129 * 129S1/Sv * 129X1/SvJ * C57BL/6 |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Sec63/Sec63 Tg(Cdh16-cre)91Igr/? |
Background: |
involves: 129 * C57BL/6 * ICR |
Zygosity: |
cn |
Has Mutant Allele: |
true |
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•
•
•
•
•
|
Genotype |
Symbol: |
Sec63/Sec63 |
Background: |
C57BL/6N-Sec63/Bay |
Zygosity: |
hm |
Has Mutant Allele: |
true |
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•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1434
 |
Fragment?: |
false |
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Sec63/Sec63 Tg(Pkd1)248Som/? Tg(Cdh16-cre)91Igr/? |
Background: |
involves: 129 * C57BL/6 * C57BL/6J * ICR * SJL/J |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Sec63/Sec63<+> |
Background: |
C57BL/6N-Sec63/Bay |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
2198
 |
Fragment?: |
false |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
2136
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Prkcsh/Prkcsh Sec63/Sec63 Tg(Cdh16-cre)91Igr/? |
Background: |
involves: 129 * C57BL/6 * ICR |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Pkd1/Pkd1<+> Sec63/Sec63 Tg(Cdh16-cre)91Igr/? |
Background: |
involves: 129 * C57BL/6 * C57BL/6J * ICR * SJL |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Pkd2/Pkd2<+> Sec63/Sec63 Tg(Cdh16-cre)91Igr/? |
Background: |
involves: 129 * C57BL/6 * C57BL/6J * ICR * SJL |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Hirose M |
Year: |
2018 |
Journal: |
Mitochondrion |
Title: |
The mitochondrial uncoupling protein 2 gene is causal for the spontaneous polycystic liver diseases in mice. |
Volume: |
42 |
|
Pages: |
50-53 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
398
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
132
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
136
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
293
 |
Fragment?: |
true |
|
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•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Members of the NSCC2 family have been sequenced from various yeast, fungal and animals species including Saccharomyces cerevisiae, Drosophila melanogaster and Homo sapiens. These proteins are the Sec62 proteins, believed to be associated with the Sec61 and Sec63 constituents of the general protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins have been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions. |
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•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Members of the NSCC2 family have been sequenced from various fungal and animal species including Saccharomyces cerevisiae, Drosophila melanogaster and Homo sapiens. These proteins are the Sec62 proteins, believed to be associated with the Sec61 and Sec63 constituents of the general protein secretary systems of yeast microsomes. They are also the non-selective cation (NS) channels of the mammalian cytoplasmic membrane. The yeast Sec62 protein has been shown to be essential for cell growth. The mammalian NS channel proteins have been implicated in platelet derived growth factor(PGDF) dependent single channel current in fibroblasts. These channels are essentially closed in serum deprived tissue-culture cells and are specifically opened by exposure to PDGF. These channels are reported to exhibit equal selectivity for Na+, K+ and Cs+ with low permeability to Ca2+, and no permeability to anions.This family of Sec62 proteins is restricted to the Ascomycota. |
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•
•
•
•
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Publication |
First Author: |
Xu WP |
Year: |
2021 |
Journal: |
J Pathol |
Title: |
Deletion of Sox9 in the liver leads to hepatic cystogenesis in mice by transcriptionally downregulating Sec63. |
Volume: |
254 |
Issue: |
1 |
Pages: |
57-69 |
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•
•
•
•
•
|
Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
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•
•
•
•
•
|
Publication |
First Author: |
Huttlin EL |
Year: |
2010 |
Journal: |
Cell |
Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
Volume: |
143 |
Issue: |
7 |
Pages: |
1174-89 |
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•
•
•
•
•
|
Publication |
First Author: |
Church DM |
Year: |
2009 |
Journal: |
PLoS Biol |
Title: |
Lineage-specific biology revealed by a finished genome assembly of the mouse. |
Volume: |
7 |
Issue: |
5 |
Pages: |
e1000112 |
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•
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