Type |
Details |
Score |
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1683328 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802774 |
|
Specimen Label: |
JAX_1802774 |
Detected: |
true |
Specimen Num: |
51 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1832128 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802772 |
|
Specimen Label: |
JAX_1802772 |
Detected: |
true |
Specimen Num: |
49 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3271628 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802752 |
|
Specimen Label: |
JAX_1802752 |
Detected: |
true |
Specimen Num: |
29 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1754028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802732 |
|
Specimen Label: |
JAX_1802732 |
Detected: |
true |
Specimen Num: |
9 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3599828 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802753 |
|
Specimen Label: |
JAX_1802753 |
Detected: |
true |
Specimen Num: |
30 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3590528 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802734 |
|
Specimen Label: |
JAX_1802734 |
Detected: |
true |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1752528 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802761 |
|
Specimen Label: |
JAX_1802761 |
Detected: |
true |
Specimen Num: |
38 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1702128 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802760 |
|
Specimen Label: |
JAX_1802760 |
Detected: |
true |
Specimen Num: |
37 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1929028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802771 |
|
Specimen Label: |
JAX_1802771 |
Detected: |
true |
Specimen Num: |
48 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3592628 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802750 |
|
Specimen Label: |
JAX_1802750 |
Detected: |
true |
Specimen Num: |
27 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3273028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802745 |
|
Specimen Label: |
JAX_1802745 |
Detected: |
true |
Specimen Num: |
22 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1757728 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802755 |
|
Specimen Label: |
JAX_1802755 |
Detected: |
true |
Specimen Num: |
32 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2991528 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802757 |
|
Specimen Label: |
JAX_1802757 |
Detected: |
true |
Specimen Num: |
34 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802763 |
|
Specimen Label: |
JAX_1802763 |
Detected: |
true |
Specimen Num: |
40 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1881228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691363 |
Age: |
postnatal adult |
Image: |
JAX_1802735 |
|
Specimen Label: |
JAX_1802735 |
Detected: |
true |
Specimen Num: |
12 |
|
•
•
•
•
•
|
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Shanghai Model Organisms Center |
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MGI Direct Data Submission |
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Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
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Mouse Genome Informatics Scientific Curators |
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Gene Ontology Annotation by the MGI Curatorial Staff |
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Mouse Genome Informatics Scientific Curators |
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Title: |
Data Curation Using Mouse Genome Assembly |
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The Jackson Laboratory |
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MGI Direct Data Submission |
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Alleles produced for the KOMP project by The Jackson Laboratory |
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Publication |
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The Gene Ontology Consortium |
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Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
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The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
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International Knockout Mouse Consortium |
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Database Download |
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MGI download of modified allele data from IKMC and creation of new knockout alleles |
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Velocigene |
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MGI Direct Data Submission |
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Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
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Publication |
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Wellcome Trust Sanger Institute |
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MGI Direct Data Submission |
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Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
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Publication |
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Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
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2014 |
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Database Release |
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Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
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Publication |
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The Gene Ontology Consortium |
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2014 |
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Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
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Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
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Publication |
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DDB, FB, MGI, GOA, ZFIN curators |
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Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
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Publication |
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PLoS Biol |
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BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
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Proc Natl Acad Sci U S A |
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Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
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Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
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Mouse Gene Trap Data Load from dbGSS |
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Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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Mouse Genome Informatics Scientific Curators |
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Database Download |
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Mouse Genome Database and National Center for Biotechnology Information |
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Database Release |
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Allen Institute for Brain Science |
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Allen Institute |
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Mouse Genome Informatics Scientific Curators |
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Database Download |
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Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
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2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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•
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Publication |
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Mouse Genome Informatics Group |
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Journal: |
Database Procedure |
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Automatic Encodes (AutoE) Reference |
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Database Release |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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•
•
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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•
•
•
•
•
|
UniProt Feature |
Begin: |
2 |
Description: |
SNARE-associated protein Snapin |
Type: |
chain |
End: |
136 |
|
•
•
•
•
•
|
Allele |
Name: |
SNAP-associated protein; targeted mutation 1, Zu-Hang Sheng |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Publication |
First Author: |
Schnöder L |
Year: |
2021 |
Journal: |
FASEB J |
Title: |
P38α-MAPK phosphorylates Snapin and reduces Snapin-mediated BACE1 transportation in APP-transgenic mice. |
Volume: |
35 |
Issue: |
7 |
Pages: |
e21691 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
82
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
56
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
53
 |
Fragment?: |
false |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
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Allele |
Name: |
SNAP-associated protein; targeted mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Targeted |
Attribute String: |
Conditional ready, No functional change |
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Protein Domain |
Type: |
Family |
Description: |
Collectrin is a putative glycoprotein that shares homology with the C-terminal of angiotensin-converting enzyme-related carboxypeptidase (ACE2), but lacks the dipeptidyl carboxypeptidase catalytic domains. It is a target of HNF-1 in pancreatic beta cells and can increase exocytosis by interaction with snapin and facilitated SNARE complex formation []. |
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Publication |
First Author: |
Fukui K |
Year: |
2005 |
Journal: |
Cell Metab |
Title: |
The HNF-1 target collectrin controls insulin exocytosis by SNARE complex formation. |
Volume: |
2 |
Issue: |
6 |
Pages: |
373-84 |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
222
 |
Fragment?: |
false |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
60
 |
Fragment?: |
true |
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Publication |
First Author: |
Xie Y |
Year: |
2015 |
Journal: |
Neuron |
Title: |
Endolysosomal Deficits Augment Mitochondria Pathology in Spinal Motor Neurons of Asymptomatic fALS Mice. |
Volume: |
87 |
Issue: |
2 |
Pages: |
355-70 |
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Publication |
First Author: |
Hu H |
Year: |
2021 |
Journal: |
Neuroscience |
Title: |
Loss of Dysbindin Implicates Synaptic Vesicle Replenishment Dysregulation as a Potential Pathogenic Mechanism in Schizophrenia. |
Volume: |
452 |
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Pages: |
138-152 |
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Publication |
First Author: |
Nazarian R |
Year: |
2006 |
Journal: |
Biochem J |
Title: |
Reinvestigation of the dysbindin subunit of BLOC-1 (biogenesis of lysosome-related organelles complex-1) as a dystrobrevin-binding protein. |
Volume: |
395 |
Issue: |
3 |
Pages: |
587-98 |
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Publication |
First Author: |
Mohl MC |
Year: |
2011 |
Journal: |
Cardiovasc Res |
Title: |
Regulation of murine cardiac contractility by activation of α(1A)-adrenergic receptor-operated Ca(2+) entry. |
Volume: |
91 |
Issue: |
2 |
Pages: |
310-9 |
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Publication |
First Author: |
Araujo CL |
Year: |
2014 |
Journal: |
Am J Physiol Cell Physiol |
Title: |
Prostatic acid phosphatase is the main acid phosphatase with 5'-ectonucleotidase activity in the male mouse saliva and regulates salivation. |
Volume: |
306 |
Issue: |
11 |
Pages: |
C1017-27 |
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Publication |
First Author: |
Zhang Q |
Year: |
2013 |
Journal: |
Cell Mol Life Sci |
Title: |
E3 ubiquitin ligase RNF13 involves spatial learning and assembly of the SNARE complex. |
Volume: |
70 |
Issue: |
1 |
Pages: |
153-65 |
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Publication |
First Author: |
Ye X |
Year: |
2017 |
Journal: |
J Neurosci |
Title: |
Regulation of Synaptic Amyloid-β Generation through BACE1 Retrograde Transport in a Mouse Model of Alzheimer's Disease. |
Volume: |
37 |
Issue: |
10 |
Pages: |
2639-2655 |
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Publication |
First Author: |
Carninci P |
Year: |
2000 |
Journal: |
Genome Res |
Title: |
Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. |
Volume: |
10 |
Issue: |
10 |
Pages: |
1617-30 |
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Publication |
First Author: |
Carninci P |
Year: |
1999 |
Journal: |
Methods Enzymol |
Title: |
High-efficiency full-length cDNA cloning. |
Volume: |
303 |
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Pages: |
19-44 |
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Publication |
First Author: |
Shibata K |
Year: |
2000 |
Journal: |
Genome Res |
Title: |
RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. |
Volume: |
10 |
Issue: |
11 |
Pages: |
1757-71 |
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Publication |
First Author: |
Katayama S |
Year: |
2005 |
Journal: |
Science |
Title: |
Antisense transcription in the mammalian transcriptome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1564-6 |
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Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
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Publication |
First Author: |
Huttlin EL |
Year: |
2010 |
Journal: |
Cell |
Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
Volume: |
143 |
Issue: |
7 |
Pages: |
1174-89 |
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Publication |
First Author: |
Church DM |
Year: |
2009 |
Journal: |
PLoS Biol |
Title: |
Lineage-specific biology revealed by a finished genome assembly of the mouse. |
Volume: |
7 |
Issue: |
5 |
Pages: |
e1000112 |
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