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Search results 101 to 151 out of 151 for Ss18

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Type Details Score
Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Gene
609586 | SS18L2
Type: gene
Organism: dog, domestic
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Gene
687029 | Ss18l2
Type: gene
Organism: rat
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Gene
736730 | SS18L2
Type: gene
Organism: chimpanzee
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Gene
618689 | SS18L2
Type: gene
Organism: cattle
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Gene
769135 | SS18L2
Type: gene
Organism: chicken
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Gene
716387 | SS18L2
Type: gene
Organism: macaque, rhesus
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Protein Domain
IPR007726 | SS18_N
Type: Domain
Description: This entry represents the N-terminal domain of SS18 and related proteins.SSXT (also known as SS18) appears to function synergistically with RBM14 as a transcriptional coactivator [].The SSXT protein is involved in synovial sarcoma in humans. A SYT-SSX fusion gene resulting from the chromosomal translocation t(X;18) (p11;q11) is characteristic of synovial sarcomas. This translocation fuses the SSXT (SYT) gene from chromosome 18 to either of two homologous genes at Xp11, SSX1 or SSX2 [].The SS18 family also includes SS18-like proteins 1 and 2, and GRF1-interacting factors from plants []. SS18-like protein 1 is a transcriptional activator which is required for calcium-dependent dendritic growth and branching in cortical neurons [, ].
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Publication
20981248 | -
 
First Author: Smith HA
Year: 2010
Journal: Clin Dev Immunol
Title: The SSX family of cancer-testis antigens as target proteins for tumor therapy.
Volume: 2010
Pages: 150591
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Publication
23686668 | -
First Author: Wang J
Year: 2013
Journal: Mol Cell Biochem
Title: Subnuclear distribution of SSX regulates its function.
Volume: 381
Issue: 1-2
Pages: 17-29
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Protein Domain
IPR028804 | SSX
Type: Family
Description: This entry represents the SSX family, including SSX1-9. They are identified as cancer testis antigens and can act as a transcription modulator. Some members of this family can become fused to the SS18 protein in synovial sarcoma (SS) through gene translocations []. In humans, SSX1-9 have a N-terminal KRAB (Krüppel-associated box) domain and a C-terminal RD (repression domain). The RD domain mediates repression of transcription and can be translocated to the C-terminal end of SYT in synovial sarcoma [].
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Publication
34078620 | J:310824
First Author: Li J
Year: 2021
Journal: Cancer Discov
Title: A Role for SMARCB1 in Synovial Sarcomagenesis Reveals That SS18-SSX Induces Canonical BAF Destruction.
Volume: 11
Issue: 10
Pages: 2620-2637
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Publication
25614489 | J:221973
First Author: Nielsen TO
Year: 2015
Journal: Cancer Discov
Title: Synovial sarcoma: recent discoveries as a roadmap to new avenues for therapy.
Volume: 5
Issue: 2
Pages: 124-34
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Protein
B1AUS7
Organism: Mus musculus/domesticus
Length: 101  
Fragment?: false
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Protein
Q6XAS4
Organism: Mus musculus/domesticus
Length: 170  
Fragment?: false
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Protein
B1AY40
Organism: Mus musculus/domesticus
Length: 170  
Fragment?: false
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Protein
Q9CPU1
Organism: Mus musculus/domesticus
Length: 170  
Fragment?: false
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Protein
Q6XAR7
Organism: Mus musculus/domesticus
Length: 170  
Fragment?: false
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Protein
Q5M8N5
Organism: Mus musculus/domesticus
Length: 212  
Fragment?: true
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Protein
Q6XAR6
Organism: Mus musculus/domesticus
Length: 170  
Fragment?: false
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Protein
Q6XAR5
Organism: Mus musculus/domesticus
Length: 170  
Fragment?: false
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Protein
Q6XAS1
Organism: Mus musculus/domesticus
Length: 140  
Fragment?: true
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Protein
B7ZNZ3
Organism: Mus musculus/domesticus
Length: 170  
Fragment?: false
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Protein
Q6XAR4
Organism: Mus musculus/domesticus
Length: 127  
Fragment?: true
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Protein
A2AHC8
Organism: Mus musculus/domesticus
Length: 147  
Fragment?: true
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Protein
A2BI73
Organism: Mus musculus/domesticus
Length: 179  
Fragment?: false
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Protein
A2BI93
Organism: Mus musculus/domesticus
Length: 185  
Fragment?: false
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Protein
F6XK35
Organism: Mus musculus/domesticus
Length: 94  
Fragment?: false
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Protein
Q6XAR9
Organism: Mus musculus/domesticus
Length: 140  
Fragment?: true
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Protein
Q6XAS0
Organism: Mus musculus/domesticus
Length: 140  
Fragment?: true
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Protein
A2BI74
Organism: Mus musculus/domesticus
Length: 170  
Fragment?: false
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Protein
Q6XAR8
Organism: Mus musculus/domesticus
Length: 170  
Fragment?: false
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Protein
A2AHC7
Organism: Mus musculus/domesticus
Length: 168  
Fragment?: false
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Protein
B7ZWB6
Organism: Mus musculus/domesticus
Length: 170  
Fragment?: false
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Protein
Q8C5Z3
Organism: Mus musculus/domesticus
Length: 165  
Fragment?: false
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Protein
Q80ZT4
Organism: Mus musculus/domesticus
Length: 128  
Fragment?: false
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Protein
Q6XAS2
Organism: Mus musculus/domesticus
Length: 159  
Fragment?: false
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Protein
Q6XAS3
Organism: Mus musculus/domesticus
Length: 170  
Fragment?: false
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Protein
A0A5H1ZRK6
Organism: Mus musculus/domesticus
Length: 127  
Fragment?: false
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
11042159 | J:68323
First Author: Carninci P
Year: 2000
Journal: Genome Res
Title: Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes.
Volume: 10
Issue: 10
Pages: 1617-30
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Publication
10349636 | J:80645
 
First Author: Carninci P
Year: 1999
Journal: Methods Enzymol
Title: High-efficiency full-length cDNA cloning.
Volume: 303
Pages: 19-44
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Publication
11076861 | J:68324
First Author: Shibata K
Year: 2000
Journal: Genome Res
Title: RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer.
Volume: 10
Issue: 11
Pages: 1757-71
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Publication
16141073 | -
First Author: Katayama S
Year: 2005
Journal: Science
Title: Antisense transcription in the mammalian transcriptome.
Volume: 309
Issue: 5740
Pages: 1564-6
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Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
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Publication
19468303 | -
First Author: Church DM
Year: 2009
Journal: PLoS Biol
Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.
Volume: 7
Issue: 5
Pages: e1000112
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

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