Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_18 |
|
Specimen Label: |
euxassay_001598_18 |
Detected: |
true |
Specimen Num: |
16 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_19 |
|
Specimen Label: |
euxassay_001598_19 |
Detected: |
true |
Specimen Num: |
17 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_20 |
|
Specimen Label: |
euxassay_001598_20 |
Detected: |
true |
Specimen Num: |
18 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1756923 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_04 |
|
Specimen Label: |
euxassay_001598_04 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1756923 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_18 |
|
Specimen Label: |
euxassay_001598_18 |
Detected: |
true |
Specimen Num: |
16 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1756923 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_19 |
|
Specimen Label: |
euxassay_001598_19 |
Detected: |
true |
Specimen Num: |
17 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5001896 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2760523 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5542450 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:13006 |
|
Specimen Label: |
GUDMAP:13006 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5001896 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2760523 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5542450 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:13007 |
|
Specimen Label: |
GUDMAP:13007 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679523 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_05 |
|
Specimen Label: |
euxassay_001598_05 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679523 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_06 |
|
Specimen Label: |
euxassay_001598_06 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679523 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_15 |
|
Specimen Label: |
euxassay_001598_15 |
Detected: |
true |
Specimen Num: |
13 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679523 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_16 |
|
Specimen Label: |
euxassay_001598_16 |
Detected: |
true |
Specimen Num: |
14 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5001896 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2852723 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5542450 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:13006 |
|
Specimen Label: |
GUDMAP:13006 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5001896 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2852723 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5542450 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:13007 |
|
Specimen Label: |
GUDMAP:13007 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5001896 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2874723 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5542450 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:13007 |
|
Specimen Label: |
GUDMAP:13007 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5001896 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2850023 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5542450 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:13006 |
|
Specimen Label: |
GUDMAP:13006 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5001896 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2850023 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5542450 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:13007 |
|
Specimen Label: |
GUDMAP:13007 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679823 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_07 |
|
Specimen Label: |
euxassay_001598_07 |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679823 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_13 |
|
Specimen Label: |
euxassay_001598_13 |
Detected: |
true |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1717104 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Moderate |
Sex: |
Not Specified |
Emaps: |
EMAPS:1679823 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4828585 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_001598_14 |
|
Specimen Label: |
euxassay_001598_14 |
Detected: |
true |
Specimen Num: |
12 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5001896 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:1796223 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5542450 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:13007 |
|
Specimen Label: |
GUDMAP:13007 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mager J |
Year: |
2019 |
Journal: |
MGI Direct Data Submission |
Title: |
A Catalog of Early Lethal KOMP Phenotypes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Alpern D |
Year: |
2014 |
Journal: |
Elife |
Title: |
TAF4, a subunit of transcription factor II D, directs promoter occupancy of nuclear receptor HNF4A during post-natal hepatocyte differentiation. |
Volume: |
3 |
|
Pages: |
e03613 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tatarakis A |
Year: |
2008 |
Journal: |
Mol Cell |
Title: |
Dominant and redundant functions of TFIID involved in the regulation of hepatic genes. |
Volume: |
31 |
Issue: |
4 |
Pages: |
531-43 |
|
•
•
•
•
•
|
Publication |
First Author: |
El-Saafin F |
Year: |
2022 |
Journal: |
Cell Death Differ |
Title: |
Loss of TAF8 causes TFIID dysfunction and p53-mediated apoptotic neuronal cell death. |
Volume: |
29 |
Issue: |
5 |
Pages: |
1013-1027 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bardot P |
Year: |
2017 |
Journal: |
Development |
Title: |
The TAF10-containing TFIID and SAGA transcriptional complexes are dispensable for early somitogenesis in the mouse embryo. |
Volume: |
144 |
Issue: |
20 |
Pages: |
3808-3818 |
|
•
•
•
•
•
|
Publication |
First Author: |
Langer D |
Year: |
2016 |
Journal: |
Nat Commun |
Title: |
Essential role of the TFIID subunit TAF4 in murine embryogenesis and embryonic stem cell differentiation. |
Volume: |
7 |
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Pages: |
11063 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ravasi T |
Year: |
2010 |
Journal: |
Cell |
Title: |
An atlas of combinatorial transcriptional regulation in mouse and man. |
Volume: |
140 |
Issue: |
5 |
Pages: |
744-52 |
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•
•
•
•
•
|
Publication |
First Author: |
Kamileri I |
Year: |
2012 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Defective transcription initiation causes postnatal growth failure in a mouse model of nucleotide excision repair (NER) progeria. |
Volume: |
109 |
Issue: |
8 |
Pages: |
2995-3000 |
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•
•
•
•
•
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Publication |
First Author: |
Suzuki H |
Year: |
2001 |
Journal: |
Genome Res |
Title: |
Protein-protein interaction panel using mouse full-length cDNAs. |
Volume: |
11 |
Issue: |
10 |
Pages: |
1758-65 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory |
Year: |
2012 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by The Jackson Laboratory |
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|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mammalian Functional Genomics Centre |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the NorCOMM project by the Mammalian Functional Genomics Centre (Mfgc), University of Manitoba |
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|
•
•
•
•
•
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Publication |
First Author: |
Birgit Meldal and Sandra Orchard (1). (1) European Bioinformatics Institute (EBI), Hinxton, Cambridgeshire, United Kingdom |
Year: |
2023 |
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Title: |
Manual transfer of experimentally-verified manual GO annotation data to homologous complexes by curator judgment of sequence, composition and function similarity |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
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•
•
•
•
•
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Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
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•
•
•
•
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Publication |
First Author: |
Yokoyama S |
Year: |
2009 |
Journal: |
Dev Cell |
Title: |
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |
Volume: |
17 |
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6 |
Pages: |
836-48 |
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•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
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Title: |
FANTOM2 Data Curation in Mouse Genome Informatics |
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•
•
•
•
•
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Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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•
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Publication |
First Author: |
Hansen GM |
Year: |
2008 |
Journal: |
Genome Res |
Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
Volume: |
18 |
Issue: |
10 |
Pages: |
1670-9 |
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•
•
•
•
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Publication |
First Author: |
Helmholtz Zentrum Muenchen GmbH |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
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•
•
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Publication |
First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
Year: |
2001 |
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Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
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•
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Publication |
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Kawai J |
Year: |
2001 |
Journal: |
Nature |
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Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
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6821 |
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685-90 |
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•
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Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
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100 |
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24 |
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14109-14 |
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GemPharmatech |
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2020 |
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Title: |
GemPharmatech Website. |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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•
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Publication |
First Author: |
GOA curators |
Year: |
2016 |
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Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
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•
•
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•
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Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
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6915 |
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563-73 |
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•
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Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
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Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
•
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Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
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1 |
Pages: |
e1000582 |
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•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
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Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
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Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
•
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Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
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•
•
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
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Title: |
Annotation inferences using phylogenetic trees |
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•
•
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
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2000 |
Journal: |
Database Release |
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Entrez Gene Load |
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•
•
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•
•
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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•
•
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
•
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•
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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•
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•
•
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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GXD Expression |
Probe: |
MGI:7641292 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360464 |
|
Stage: |
TS04 |
Assay Id: |
MGI:7641362 |
Age: |
embryonic day 3.5 |
Image: |
1 |
|
Specimen Label: |
Taf13 -/- |
Detected: |
true |
Specimen Num: |
1 |
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•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7641292 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360464 |
|
Stage: |
TS04 |
Assay Id: |
MGI:7641362 |
Age: |
embryonic day 3.5 |
Image: |
1 |
|
Specimen Label: |
Taf13 +/+ |
Detected: |
true |
Specimen Num: |
2 |
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•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7641292 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360464 |
|
Stage: |
TS04 |
Assay Id: |
MGI:7641362 |
Age: |
embryonic day 3.5 |
Image: |
1 |
|
Specimen Label: |
Taf13 +/+ |
Detected: |
true |
Specimen Num: |
3 |
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•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7641291 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360464 |
|
Stage: |
TS04 |
Assay Id: |
MGI:7641370 |
Age: |
embryonic day 3.5 |
Image: |
1 |
|
Specimen Label: |
Taf13 -/- |
Detected: |
true |
Specimen Num: |
1 |
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•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7641291 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360464 |
|
Stage: |
TS04 |
Assay Id: |
MGI:7641370 |
Age: |
embryonic day 3.5 |
Image: |
1 |
|
Specimen Label: |
Taf13 +/+ |
Detected: |
true |
Specimen Num: |
2 |
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•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7641291 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360464 |
|
Stage: |
TS04 |
Assay Id: |
MGI:7641370 |
Age: |
embryonic day 3.5 |
Image: |
1 |
|
Specimen Label: |
Taf13 +/+ |
Detected: |
true |
Specimen Num: |
3 |
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•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7641290 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360464 |
|
Stage: |
TS04 |
Assay Id: |
MGI:7641371 |
Age: |
embryonic day 3.5 |
Image: |
1 |
|
Specimen Label: |
Taf13 -/- |
Detected: |
true |
Specimen Num: |
1 |
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•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7641290 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360464 |
|
Stage: |
TS04 |
Assay Id: |
MGI:7641371 |
Age: |
embryonic day 3.5 |
Image: |
1 |
|
Specimen Label: |
Taf13 +/+ |
Detected: |
true |
Specimen Num: |
2 |
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•
•
•
•
•
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GXD Expression |
Probe: |
MGI:7641290 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360464 |
|
Stage: |
TS04 |
Assay Id: |
MGI:7641371 |
Age: |
embryonic day 3.5 |
Image: |
1 |
|
Specimen Label: |
Taf13 +/+ |
Detected: |
true |
Specimen Num: |
3 |
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•
•
•
•
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GXD Expression |
Probe: |
MGI:6386802 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:360409 |
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Stage: |
TS09 |
Assay Id: |
MGI:7641381 |
Age: |
embryonic day 6.5 |
Image: |
3 |
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Specimen Label: |
Taf13 -/- |
Detected: |
false |
Specimen Num: |
1 |
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•
•
•
•
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GXD Expression |
Probe: |
MGI:6386802 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360409 |
|
Stage: |
TS09 |
Assay Id: |
MGI:7641381 |
Age: |
embryonic day 6.5 |
Image: |
3 |
|
Specimen Label: |
Taf13 +/- |
Detected: |
true |
Specimen Num: |
2 |
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•
•
•
•
•
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GXD Expression |
Probe: |
MGI:6386802 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360409 |
|
Stage: |
TS09 |
Assay Id: |
MGI:7641381 |
Age: |
embryonic day 6.5 |
Image: |
3 |
|
Specimen Label: |
Taf13 +/+ |
Detected: |
true |
Specimen Num: |
3 |
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•
•
•
•
•
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GXD Expression |
Probe: |
MGI:7641290 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:360409 |
|
Stage: |
TS09 |
Assay Id: |
MGI:7641382 |
Age: |
embryonic day 6.5 |
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Specimen Label: |
Taf13 -/- |
Detected: |
false |
Specimen Num: |
1 |
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•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7641290 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360409 |
|
Stage: |
TS09 |
Assay Id: |
MGI:7641382 |
Age: |
embryonic day 6.5 |
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|
Specimen Label: |
Taf13 +/+ |
Detected: |
true |
Specimen Num: |
2 |
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•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7641291 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Absent |
Sex: |
Not Specified |
Emaps: |
EMAPS:360409 |
|
Stage: |
TS09 |
Assay Id: |
MGI:7641383 |
Age: |
embryonic day 6.5 |
|
|
Specimen Label: |
Taf13 -/- |
Detected: |
false |
Specimen Num: |
1 |
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•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7641291 |
Assay Type: |
RT-PCR |
Annotation Date: |
2024-05-21 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:360409 |
|
Stage: |
TS09 |
Assay Id: |
MGI:7641383 |
Age: |
embryonic day 6.5 |
|
|
Specimen Label: |
Taf13 +/+ |
Detected: |
true |
Specimen Num: |
2 |
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•
•
•
•
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Gene |
Type: |
gene |
Organism: |
dog, domestic |
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DO Term |
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Allele |
Name: |
transgene insertion HR261, GENSAT Project at Rockefeller University |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
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Strain |
Attribute String: |
mutant stock, transgenic |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
94
 |
Fragment?: |
false |
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•
•
•
•
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Publication |
First Author: |
Chen X |
Year: |
2021 |
Journal: |
Science |
Title: |
Structural insights into preinitiation complex assembly on core promoters. |
Volume: |
372 |
Issue: |
6541 |
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•
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•
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Protein Domain |
Type: |
Family |
Description: |
TFIID is a multiprotein complex composed of the TATA binding protein and TBP-associated factors (TAFs), and is required for accurate and regulated initiation of transcription by RNA polymerase II. This entry represents TAF11, which together with TAF13 and TBP, play key roles during promoter binding by the TFIID and TFIIA transcription factor complexes [, ]. |
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Allele |
Name: |
TATA-box binding protein associated factor 13; endonuclease-mediated mutation 1, Jackson |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
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•
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•
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Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
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•
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Genotype |
Symbol: |
Taf13/Taf13 |
Background: |
C57BL/6NJ-Taf13/Mmjax |
Zygosity: |
hm |
Has Mutant Allele: |
true |
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•
•
•
•
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Genotype |
Symbol: |
Taf13/Taf13<+> |
Background: |
C57BL/6NJ-Taf13/Mmjax |
Zygosity: |
ht |
Has Mutant Allele: |
true |
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•
•
•
•
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Protein Domain |
Type: |
Family |
Description: |
This family includes the Spt3 yeast transcription factors and the 18kDa subunit from human transcription initiation factor IID, known as TAF13 or TAFII18. Determination of the crystal structure reveals an atypical histone fold [].TBP-associated factor 13 (TAF13) is one of several TAFs that bind TBP and is involved in forming the transcription factor IID (TFIID) complex. TAF13 interacts with TAF11 and makes a histone-like heterodimer similar to H3/H4-like proteins. The dimer may be structurally and functionally similar to the spt3 protein within the SAGA histone acetyltransferase complex [].TFIID is one of seven General Transcription Factors (GTF) (TFIIA, TFIIB, TFIID, TFIIE, TFIIF, and TFIID) that are involved in accurate initiation of transcription by RNA polymerase II in eukaryotes. TFIID plays an important role in the recognition of promoter DNA and assembly of the pre-initiation complex. TFIID complex is composed of the TBP and at least 13 TAFs. Each TAF, with the help of a specific activator, is required only for expression of subset of genes and is not universally involved for transcription as are GTFs. In yeast and human cells, TAFs have been found as components of other complexes besides TFIID. Several TAFs interact via histone-fold (HFD) motifs; the HFD is the interaction motif involved in heterodimerization of the core histones and their assembly into nucleosome octamers. The minimal HFD contains three α-helices linked by two loops and are found in core histones, TAFs and many other transcription factors. TFIID has a histone octamer-like substructure. |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
124
 |
Fragment?: |
false |
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
406
 |
Fragment?: |
true |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
382
 |
Fragment?: |
true |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
374
 |
Fragment?: |
false |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
374
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
374
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Birck C |
Year: |
1998 |
Journal: |
Cell |
Title: |
Human TAF(II)28 and TAF(II)18 interact through a histone fold encoded by atypical evolutionary conserved motifs also found in the SPT3 family. |
Volume: |
94 |
Issue: |
2 |
Pages: |
239-49 |
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•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
211
 |
Fragment?: |
false |
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•
•
•
•
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