Type |
Details |
Score |
Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Guiducci C |
Year: |
2013 |
Journal: |
J Exp Med |
Title: |
RNA recognition by human TLR8 can lead to autoimmune inflammation. |
Volume: |
210 |
Issue: |
13 |
Pages: |
2903-19 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang T |
Year: |
2024 |
Journal: |
Cell Commun Signal |
Title: |
MiR-574-5p activates human TLR8 to promote autoimmune signaling and lupus. |
Volume: |
22 |
Issue: |
1 |
Pages: |
220 |
|
•
•
•
•
•
|
Publication |
First Author: |
Butchi NB |
Year: |
2008 |
Journal: |
J Immunol |
Title: |
Analysis of the neuroinflammatory response to TLR7 stimulation in the brain: comparison of multiple TLR7 and/or TLR8 agonists. |
Volume: |
180 |
Issue: |
11 |
Pages: |
7604-12 |
|
•
•
•
•
•
|
Publication |
First Author: |
Prinz N |
Year: |
2011 |
Journal: |
Blood |
Title: |
Antiphospholipid antibodies induce translocation of TLR7 and TLR8 to the endosome in human monocytes and plasmacytoid dendritic cells. |
Volume: |
118 |
Issue: |
8 |
Pages: |
2322-32 |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
Allele |
Name: |
toll-like receptor 7; targeted mutation 3, Shanghai Model Organisms Center |
Allele Type: |
Targeted |
Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
Allele |
Name: |
toll-like receptor 8; targeted mutation 3, Shanghai Model Organisms Center |
Allele Type: |
Targeted |
Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
GO Term |
|
•
•
•
•
•
|
Publication |
First Author: |
Philbin VJ |
Year: |
2005 |
Journal: |
Immunology |
Title: |
Identification and characterization of a functional, alternatively spliced Toll-like receptor 7 (TLR7) and genomic disruption of TLR8 in chickens. |
Volume: |
114 |
Issue: |
4 |
Pages: |
507-21 |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
298
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
303
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
83
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
298
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Harris VM |
Year: |
2019 |
Journal: |
Front Immunol |
Title: |
Lysosomal pH Is Regulated in a Sex Dependent Manner in Immune Cells Expressing CXorf21. |
Volume: |
10 |
|
Pages: |
578 |
|
•
•
•
•
•
|
Publication |
First Author: |
Heinz LX |
Year: |
2020 |
Journal: |
Nature |
Title: |
TASL is the SLC15A4-associated adaptor for IRF5 activation by TLR7-9. |
Volume: |
581 |
Issue: |
7808 |
Pages: |
316-322 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen W |
Year: |
2008 |
Journal: |
Nat Struct Mol Biol |
Title: |
Insights into interferon regulatory factor activation from the crystal structure of dimeric IRF5. |
Volume: |
15 |
Issue: |
11 |
Pages: |
1213-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Barnes BJ |
Year: |
2001 |
Journal: |
J Biol Chem |
Title: |
Virus-specific activation of a novel interferon regulatory factor, IRF-5, results in the induction of distinct interferon alpha genes. |
Volume: |
276 |
Issue: |
26 |
Pages: |
23382-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dideberg V |
Year: |
2007 |
Journal: |
Hum Mol Genet |
Title: |
An insertion-deletion polymorphism in the interferon regulatory Factor 5 (IRF5) gene confers risk of inflammatory bowel diseases. |
Volume: |
16 |
Issue: |
24 |
Pages: |
3008-16 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sigurdsson S |
Year: |
2005 |
Journal: |
Am J Hum Genet |
Title: |
Polymorphisms in the tyrosine kinase 2 and interferon regulatory factor 5 genes are associated with systemic lupus erythematosus. |
Volume: |
76 |
Issue: |
3 |
Pages: |
528-37 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schoenemeyer A |
Year: |
2005 |
Journal: |
J Biol Chem |
Title: |
The interferon regulatory factor, IRF5, is a central mediator of toll-like receptor 7 signaling. |
Volume: |
280 |
Issue: |
17 |
Pages: |
17005-12 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Interferon regulatory factor 5 (IRF5) is a transcription factor involved in the induction of interferons IFNA and INFB and inflammatory cytokines upon virus infection []. It is activated by TLR7 or TLR8 signalling []. Its structure has been revealed []. Variations of the IRF5 gene affects the susceptibility of a few diseases, such as inflammatory bowel disease 14 (IBD14) [], systemic lupus erythematosus 10 (SLEB10) []and Rheumatoid arthritis (RA). |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
In humans, TASL (TLR adaptor interacting with SLC15A4 on the lysosome) is encoded by CXorf21 that is associated with systemic lupus erythematosus []. It is an immune adaptor that is required for recruitment and activation of IRF5 by TLR7, TLR8 and TLR9, in mechanistic analogy to IRF3 and its three adaptors STING, MAVS and TRIF. TASL interacts with the endolysosomal transporter SLC15A4; the SLC15A4-TASL complex is required for endolysosomal TLR signalling. TASL contains a pLxIS motif that is important for its function []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Kawai T |
Year: |
2004 |
Journal: |
Nat Immunol |
Title: |
Interferon-alpha induction through Toll-like receptors involves a direct interaction of IRF7 with MyD88 and TRAF6. |
Volume: |
5 |
Issue: |
10 |
Pages: |
1061-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Allen RM |
Year: |
2022 |
Journal: |
Nat Cell Biol |
Title: |
LDL delivery of microbial small RNAs drives atherosclerosis through macrophage TLR8. |
Volume: |
24 |
Issue: |
12 |
Pages: |
1701-1713 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ohto U |
Year: |
2018 |
Journal: |
Immunity |
Title: |
Toll-like Receptor 9 Contains Two DNA Binding Sites that Function Cooperatively to Promote Receptor Dimerization and Activation. |
Volume: |
48 |
Issue: |
4 |
Pages: |
649-658.e4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pohar J |
Year: |
2017 |
Journal: |
Nat Commun |
Title: |
Short single-stranded DNA degradation products augment the activation of Toll-like receptor 9. |
Volume: |
8 |
|
Pages: |
15363 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bhagchandani SH |
Year: |
2023 |
Journal: |
Sci Adv |
Title: |
Engineering kinetics of TLR7/8 agonist release from bottlebrush prodrugs enables tumor-focused immune stimulation. |
Volume: |
9 |
Issue: |
16 |
Pages: |
eadg2239 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang JP |
Year: |
2008 |
Journal: |
Blood |
Title: |
Toll-like receptor-mediated activation of neutrophils by influenza A virus. |
Volume: |
112 |
Issue: |
5 |
Pages: |
2028-34 |
|
•
•
•
•
•
|
Publication |
First Author: |
Miyake K |
Year: |
2018 |
Journal: |
Int Immunol |
Title: |
Mechanisms controlling nucleic acid-sensing Toll-like receptors. |
Volume: |
30 |
Issue: |
2 |
Pages: |
43-51 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cho SX |
Year: |
2020 |
Journal: |
Nat Commun |
Title: |
Characterization of the pathoimmunology of necrotizing enterocolitis reveals novel therapeutic opportunities. |
Volume: |
11 |
Issue: |
1 |
Pages: |
5794 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kovtonyuk LV |
Year: |
2022 |
Journal: |
Blood |
Title: |
IL-1 mediates microbiome-induced inflammaging of hematopoietic stem cells in mice. |
Volume: |
139 |
Issue: |
1 |
Pages: |
44-58 |
|
•
•
•
•
•
|
Publication |
First Author: |
Conte C |
Year: |
2019 |
Journal: |
Int J Mol Sci |
Title: |
Niemann-Pick Type A Disease: Behavior of Neutral Sphingomyelinase and Vitamin D Receptor. |
Volume: |
20 |
Issue: |
9 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Ah Kioon MD |
Year: |
2018 |
Journal: |
Sci Transl Med |
Title: |
Plasmacytoid dendritic cells promote systemic sclerosis with a key role for TLR8. |
Volume: |
10 |
Issue: |
423 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Shibata T |
Year: |
2016 |
Journal: |
Int Immunol |
Title: |
Guanosine and its modified derivatives are endogenous ligands for TLR7. |
Volume: |
28 |
Issue: |
5 |
Pages: |
211-22 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jeudy S |
Year: |
2011 |
Journal: |
PLoS One |
Title: |
Bcl-2 inhibits the innate immune response during early pathogenesis of murine congenital muscular dystrophy. |
Volume: |
6 |
Issue: |
8 |
Pages: |
e22369 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ha JY |
Year: |
2023 |
Journal: |
PLoS Pathog |
Title: |
Periodontitis promotes bacterial extracellular vesicle-induced neuroinflammation in the brain and trigeminal ganglion. |
Volume: |
19 |
Issue: |
10 |
Pages: |
e1011743 |
|
•
•
•
•
•
|
Publication |
First Author: |
Menendez D |
Year: |
2011 |
Journal: |
PLoS Genet |
Title: |
The Toll-like receptor gene family is integrated into human DNA damage and p53 networks. |
Volume: |
7 |
Issue: |
3 |
Pages: |
e1001360 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhu W |
Year: |
2011 |
Journal: |
Cell Immunol |
Title: |
Overexpressing autoimmune regulator regulates the expression of toll-like receptors by interacting with their promoters in RAW264.7 cells. |
Volume: |
270 |
Issue: |
2 |
Pages: |
156-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nyberg WA |
Year: |
2016 |
Journal: |
Biochem Biophys Res Commun |
Title: |
Imiquimod induces ER stress and Ca(2+) influx independently of TLR7 and TLR8. |
Volume: |
473 |
Issue: |
4 |
Pages: |
789-794 |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE9287 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Publication |
First Author: |
Choudry M |
Year: |
2018 |
Journal: |
Immunology |
Title: |
Deficient arginase II expression without alteration in arginase I expression attenuated experimental autoimmune encephalomyelitis in mice. |
Volume: |
155 |
Issue: |
1 |
Pages: |
85-98 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
80
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
134
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
497
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
497
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
494
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
401
 |
Fragment?: |
false |
|
•
•
•
•
•
|