|  Help  |  About  |  Contact Us

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, diseases, strains, ontology terms, etc. (e.g. Pax6, Parkinson, ataxia)
  • Use OR to search for either of two terms (e.g. OR mus) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. Balb* for partial matches or mus AND NOT embryo to exclude a term

Search results 101 to 163 out of 163 for Trac

<< First    < Previous  |  Next >    Last >>
0.031s

Categories

Hits by Pathway

Hits by Category

Hits by Strain

Type Details Score
Publication
8163944 | J:33001
First Author: Kuchroo VK
Year: 1994
Journal: J Exp Med
Title: T cell receptor (TCR) usage determines disease susceptibility in experimental autoimmune encephalomyelitis: studies with TCR V beta 8.2 transgenic mice.
Volume: 179
Issue: 5
Pages: 1659-64
•
•
•
•
•
Publication
2995827 | J:8041
First Author: Becker DM
Year: 1985
Journal: Nature
Title: Variability and repertoire size of T-cell receptor V alpha gene segments.
Volume: 317
Issue: 6036
Pages: 430-4
•
•
•
•
•
Publication
2993908 | J:7999
First Author: Winoto A
Year: 1985
Journal: Nature
Title: Genomic organization of the genes encoding mouse T-cell receptor alpha-chain.
Volume: 316
Issue: 6031
Pages: 832-6
•
•
•
•
•
Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
•
•
•
•
•
Publication
37339974 | J:337059
First Author: Iwanami N
Year: 2023
Journal: Nat Commun
Title: Tnpo3 controls splicing of the pre-mRNA encoding the canonical TCR α chain of iNKT cells.
Volume: 14
Issue: 1
Pages: 3645
•
•
•
•
•
Publication
2160502 | J:28590
First Author: Hue I
Year: 1990
Journal: J Immunol
Title: A novel type of aberrant T cell receptor alpha-chain gene rearrangement. Implications for allelic exclusion and the V-J recombination process.
Volume: 144
Issue: 11
Pages: 4410-9
•
•
•
•
•
Publication
3081679 | J:8208
First Author: Epstein R
Year: 1986
Journal: J Exp Med
Title: The cytotoxic T cell response to the male-specific histocompatibility antigen (H-Y) is controlled by two dominant immune response genes, one in the MHC, the other in the Tar alpha-locus.
Volume: 163
Issue: 4
Pages: 759-73
•
•
•
•
•
Publication
1694219 | J:31243
First Author: Danska JS
Year: 1990
Journal: J Exp Med
Title: The presumptive CDR3 regions of both T cell receptor alpha and beta chains determine T cell specificity for myoglobin peptides.
Volume: 172
Issue: 1
Pages: 27-33
•
•
•
•
•
Publication
1979062 | J:10868
First Author: Gleditsch L
Year: 1990
Journal: Immunogenetics
Title: No recombinations between Tcra-V and Tcra-C gene segments in 669 backcross mice.
Volume: 32
Issue: 5
Pages: 297-303
•
•
•
•
•
Publication
8302301 | J:16747
First Author: Tang XX
Year: 1994
Journal: Mol Immunol
Title: Nucleotide sequences of three new members of the mouse V alpha 2 gene family.
Volume: 31
Issue: 1
Pages: 78-82
•
•
•
•
•
Publication
8075639 | J:17988
First Author: Koop BF
Year: 1994
Journal: Nat Genet
Title: Striking sequence similarity over almost 100 kilobases of human and mouse T-cell receptor DNA.
Volume: 7
Issue: 1
Pages: 48-53
•
•
•
•
•
Publication
3012351 | J:8303
First Author: Fink PJ
Year: 1986
Journal: Nature
Title: Correlations between T-cell specificity and the structure of the antigen receptor.
Volume: 321
Issue: 6067
Pages: 219-26
•
•
•
•
•
Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
•
•
•
•
•
Publication
3262424 | J:31196
First Author: Malissen M
Year: 1988
Journal: Cell
Title: A T cell clone expresses two T cell receptor alpha genes but uses one alpha beta heterodimer for allorecognition and self MHC-restricted antigen recognition.
Volume: 55
Issue: 1
Pages: 49-59
•
•
•
•
•
Publication
2849763 | J:9520
First Author: Yague J
Year: 1988
Journal: Nucleic Acids Res
Title: The structure of V alpha and J alpha segments in the mouse.
Volume: 16
Issue: 23
Pages: 11355-64
•
•
•
•
•
Publication
2527198 | J:9918
First Author: Jouvin-Marche E
Year: 1989
Journal: Immunogenetics
Title: Complexity, polymorphism, and recombination of mouse T-cell receptor alpha gene families.
Volume: 30
Issue: 2
Pages: 99-104
•
•
•
•
•
Publication
8082892 | J:20598
First Author: Wang K
Year: 1994
Journal: Immunogenetics
Title: The expression of mouse T-cell receptor TCRDV genes in BALB/c spleen.
Volume: 40
Issue: 4
Pages: 271-9
•
•
•
•
•
Publication
8805626 | J:40370
First Author: Hsu BL
Year: 1996
Journal: J Immunol
Title: TCR recognition of the Hb(64-76)/I-Ek determinant: single conservative amino acid changes in the complementarity-determining region 3 dramatically alter antigen fine specificity.
Volume: 157
Issue: 6
Pages: 2291-8
•
•
•
•
•
Publication
3785427 | J:36281
First Author: Yoshikai Y
Year: 1986
Journal: Nature
Title: Athymic mice express a high level of functional gamma-chain but greatly reduced levels of alpha- and beta-chain T-cell receptor messages.
Volume: 324
Issue: 6096
Pages: 482-5
•
•
•
•
•
Publication
3490968 | J:23982
First Author: Chou HS
Year: 1986
Journal: EMBO J
Title: T cell receptor genes in an alloreactive CTL clone: implications for rearrangement and germline diversity of variable gene segments.
Volume: 5
Issue: 9
Pages: 2149-55
•
•
•
•
•
Publication
1371498 | J:1984
First Author: Gleditsch L
Year: 1992
Journal: Immunogenetics
Title: A Tcra congenic mouse: V alpha epitope expression is influenced by both Tcra haplotypes and background genes.
Volume: 35
Issue: 3
Pages: 153-60
•
•
•
•
•
Publication
- | J:46439
     
First Author: Freeman TC
Year: 1998
Journal: MGI Direct Data Submission
Title: Expression Mapping of Mouse Genes
•
•
•
•
•
Publication
- | J:326541
       
First Author: Cyagen Biosciences Inc.
Year: 2022
Title: Cyagen Biosciences Website.
•
•
•
•
•
Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
•
•
•
•
•
Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
•
•
•
•
•
Publication
15608191 | J:164272
First Author: Giudicelli V
Year: 2005
Journal: Nucleic Acids Res
Title: IMGT/GENE-DB: a comprehensive database for human and mouse immunoglobulin and T cell receptor genes.
Volume: 33
Issue: Database issue
Pages: D256-61
•
•
•
•
•
Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
•
•
•
•
•
Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
•
•
•
•
•
Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
•
•
•
•
•
Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
•
•
•
•
•
Author
Trac PT
•
•
•
•
•
Author
Trac C
•
•
•
•
•
Author
Trac D
•
•
•
•
•
Protein Domain
IPR014117 | TraC-F-type
Type: Family
Description: The proteins in this entry are found in the F, P and I-like type IV secretion systems. Gene symbols include TraC (F-type), TrbE/VirB4 (P-type) and TraU (I-type). The proteins contain the Walker A and B motifs and so are putative nucleotide triphosphatases [, ].
•
•
•
•
•
Allele
Trac<em1Cya> | MGI:7657336
Name: T cell receptor alpha constant; endonuclease-mediated mutation 1, Cyagen Biosciences
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
•
•
•
•
•
Publication
30264928 | -
First Author: González-Rivera C
Year: 2019
Journal: Mol Microbiol
Title: Two pKM101-encoded proteins, the pilus-tip protein TraC and Pep, assemble on the Escherichia coli cell surface as adhesins required for efficient conjugative DNA transfer.
Volume: 111
Issue: 1
Pages: 96-117
•
•
•
•
•
Strain
MGI:7657571 | C57BL/6J-Trac<em1Cya>/Cya
Attribute String: coisogenic, endonuclease-mediated mutation, mutant strain
•
•
•
•
•
Publication
27006400 | J:356287
First Author: Leung A
Year: 2016
Journal: J Biol Chem
Title: Persistent Chromatin Modifications Induced by High Fat Diet.
Volume: 291
Issue: 20
Pages: 10446-55
•
•
•
•
•
Publication
34668484 | J:312950
   
First Author: Costello KR
Year: 2021
Journal: Elife
Title: Sequence features of retrotransposons allow for epigenetic variability.
Volume: 10
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:6715367
Assay Type: Immunohistochemistry
Annotation Date: 2021-06-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1634617
Pattern: Not Specified
Stage: TS17
Assay Id: MGI:6715546
Age: embryonic day 10.5
Note: Number of cardiomyocytes in outflow trac and right ventricle were similar betwen control and mutant embryos at E9.5 and E10.5.
Specimen Label: E10.5 CTL not shown
Detected: true
Specimen Num: 3
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:6715367
Assay Type: Immunohistochemistry
Annotation Date: 2021-06-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1634617
Pattern: Not Specified
Stage: TS17
Assay Id: MGI:6715546
Age: embryonic day 10.5
Note: Number of cardiomyocytes in outflow trac and right ventricle were similar betwen control and mutant embryos at E9.5 and E10.5.
Specimen Label: E10.5 shfKO not shown
Detected: true
Specimen Num: 4
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:6715367
Assay Type: Immunohistochemistry
Annotation Date: 2021-06-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1635017
Pattern: Not Specified
Stage: TS17
Assay Id: MGI:6715546
Age: embryonic day 10.5
Note: Number of cardiomyocytes in outflow trac and right ventricle were similar betwen control and mutant embryos at E9.5 and E10.5.
Specimen Label: E10.5 CTL not shown
Detected: true
Specimen Num: 3
•
•
•
•
•
GXD Expression
GXD Expression
 
Probe: MGI:6715367
Assay Type: Immunohistochemistry
Annotation Date: 2021-06-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1635017
Pattern: Not Specified
Stage: TS17
Assay Id: MGI:6715546
Age: embryonic day 10.5
Note: Number of cardiomyocytes in outflow trac and right ventricle were similar betwen control and mutant embryos at E9.5 and E10.5.
Specimen Label: E10.5 shfKO not shown
Detected: true
Specimen Num: 4
•
•
•
•
•
Publication
25006255 | J:356307
First Author: Leung A
Year: 2014
Journal: J Biol Chem
Title: Open chromatin profiling in mice livers reveals unique chromatin variations induced by high fat diet.
Volume: 289
Issue: 34
Pages: 23557-67
•
•
•
•
•
Publication
1818755 | -
First Author: Miele L
Year: 1991
Journal: DNA Seq
Title: Gene organization and nucleotide sequence of the primase region of IncP plasmids RP4 and R751.
Volume: 2
Issue: 3
Pages: 145-62
•
•
•
•
•
Protein Domain
IPR043764 | DUF5710
Type: Domain
Description: This is a domain of unknown function which can be found in DNA primases such as TraC [].
•
•
•
•
•
Protein Coding Gene
MGI:1351659 | Abcg5
Type: protein_coding_gene
Organism: mouse, laboratory
•
•
•
•
•
Protein
Q9WU42
Organism: Mus musculus/domesticus
Length: 2472  
Fragment?: false
•
•
•
•
•
Protein
Q9WU42-2
Organism: Mus musculus/domesticus
Length: 2253  
Fragment?: false
•
•
•
•
•
Publication
12855161 | -
First Author: Lawley TD
Year: 2003
Journal: FEMS Microbiol Lett
Title: F factor conjugation is a true type IV secretion system.
Volume: 224
Issue: 1
Pages: 1-15
•
•
•
•
•
DO Term
DOID:0111977 | immunodeficiency 7
•
•
•
•
•
Protein Domain
IPR045978 | TRAC_dom
Type: Domain
Description: This entry represents a central domain found in the type IV secretion system protein TraC from Escherichia coli (strain K12). TraC is required for the assembly of mature F-pilin subunits into extended F pili, thus involved in bacterial conjugation [, ]. This domain is mainly found in proteins from Proteobacteria, and is approximately 170 amino acids in length. It is found in association with PF11130. There are two conserved sequence motifs: GWDL and QGEY.
•
•
•
•
•
Publication
16138100 | -
First Author: Frost LS
Year: 2005
Journal: Nat Rev Microbiol
Title: Mobile genetic elements: the agents of open source evolution.
Volume: 3
Issue: 9
Pages: 722-32
•
•
•
•
•
Allele
Trac<em1(Tcrb,Tcra)Strom> | MGI:7645418
Name: T cell receptor alpha constant; endonuclease-mediated mutation 1, Ingunn Stromnes
Allele Type: Endonuclease-mediated
Attribute String: Inserted expressed sequence, Null/knockout
•
•
•
•
•
Allele
Trac<em2(Tcrb,Tcra)Strom> | MGI:7645419
 
Name: T cell receptor alpha constant; endonuclease-mediated mutation 2, Ingunn Stromnes
Attribute String: Inserted expressed sequence, Null/knockout
•
•
•
•
•
Publication
15901731 | -
First Author: Yuan Q
Year: 2005
Journal: J Biol Chem
Title: Identification of the VirB4-VirB8-VirB5-VirB2 pilus assembly sequence of type IV secretion systems.
Volume: 280
Issue: 28
Pages: 26349-59
•
•
•
•
•
Protein Domain
IPR014158 | T4SS_VirB5
Type: Family
Description: This entry contains VirB5, a protein that is involved in the type IV DNA secretion systems typified by the Agrobacterium Ti plasmid vir system where it interacts with several other proteins essential for proper pilus formation []. VirB5 is homologous to the IncN (N-type) conjugation system protein TraC []as well as the P-type protein TrbJ and the F-type protein TraE [].
•
•
•
•
•
Publication
1350587 | -
First Author: Schandel KA
Year: 1992
Journal: J Bacteriol
Title: Localization of TraC, a protein involved in assembly of the F conjugative pilus.
Volume: 174
Issue: 11
Pages: 3800-6
•
•
•
•
•
Strain
MGI:7645425 | C57BL/6J-Trac<em1(Tcrb,Tcra)Strom> Msln<em1Strom>/J
Attribute String: coisogenic, mutant strain, endonuclease-mediated mutation
•
•
•
•
•
Strain
MGI:7645428 | C57BL/6J-Trac<em2(Tcrb,Tcra)Strom> Msln<em2Strom>/J
Attribute String: coisogenic, mutant strain, endonuclease-mediated mutation
•
•
•
•
•
Publication
14673074 | -
First Author: Yeo HJ
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Structural and functional characterization of the VirB5 protein from the type IV secretion system encoded by the conjugative plasmid pKM101.
Volume: 100
Issue: 26
Pages: 15947-52
•
•
•
•
•
Protein Domain
IPR025955 | TraC/Conjuga_ATPase
Type: Family
Description: This family of TraC-related proteins is conserved in Proteobacteria. TraC is a cytoplasmic, peripheral membrane protein and is one of the proteins encoded by the F transfer region of the conjugative plasmid that is required for the assembly of F pilin into the mature F pilus structure. F pili are filamentous appendages that help establish the physical contact between donor and recipient cells involved in the conjugation process []. This family also includes predicted ATPases associated with DNA conjugal transfer. These are found both in plasmids and in bacterial chromosomal regions that appear to derive from integrative elements such as conjugative transposons.
•
•
•
•
•
Publication
19846887 | J:157223
First Author: Chase TH
Year: 2010
Journal: Blood
Title: The mouse mutation "thrombocytopenia and cardiomyopathy" (trac) disrupts Abcg5: a spontaneous single gene model for human hereditary phytosterolemia/sitosterolemia.
Volume: 115
Issue: 6
Pages: 1267-76
•
•
•
•
•




MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom