Type |
Details |
Score |
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Skarnes WC |
Year: |
2011 |
Journal: |
Nature |
Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
Volume: |
474 |
Issue: |
7351 |
Pages: |
337-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
2022 |
|
Title: |
Cyagen Biosciences Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang XW |
Year: |
2022 |
Journal: |
Sci Adv |
Title: |
Neuroinflammation inhibition by small-molecule targeting USP7 noncatalytic domain for neurodegenerative disease therapy. |
Volume: |
8 |
Issue: |
32 |
Pages: |
eabo0789 |
|
•
•
•
•
•
|
Publication |
First Author: |
Grunblatt E |
Year: |
2020 |
Journal: |
Genes Dev |
Title: |
MYCN drives chemoresistance in small cell lung cancer while USP7 inhibition can restore chemosensitivity. |
Volume: |
34 |
Issue: |
17-18 |
Pages: |
1210-1226 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nathan JA |
Year: |
2008 |
Journal: |
Traffic |
Title: |
The ubiquitin E3 ligase MARCH7 is differentially regulated by the deubiquitylating enzymes USP7 and USP9X. |
Volume: |
9 |
Issue: |
7 |
Pages: |
1130-45 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yao Y |
Year: |
2018 |
Journal: |
J Leukoc Biol |
Title: |
Blockade of deubiquitinase USP7 overcomes bortezomib resistance by suppressing NF-κB signaling pathway in multiple myeloma. |
Volume: |
104 |
Issue: |
6 |
Pages: |
1105-1115 |
|
•
•
•
•
•
|
Publication |
First Author: |
Biswas K |
Year: |
2018 |
Journal: |
Nat Commun |
Title: |
BRE/BRCC45 regulates CDC25A stability by recruiting USP7 in response to DNA damage. |
Volume: |
9 |
Issue: |
1 |
Pages: |
537 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shao Y |
Year: |
2022 |
Journal: |
Aging (Albany NY) |
Title: |
Ubiquitin-like protein FAT10 promotes renal fibrosis by stabilizing USP7 to prolong CHK1-mediated G2/M arrest in renal tubular epithelial cells. |
Volume: |
14 |
Issue: |
18 |
Pages: |
7527-7546 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schwertman P |
Year: |
2012 |
Journal: |
Nat Genet |
Title: |
UV-sensitive syndrome protein UVSSA recruits USP7 to regulate transcription-coupled repair. |
Volume: |
44 |
Issue: |
5 |
Pages: |
598-602 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ma H |
Year: |
2012 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
M phase phosphorylation of the epigenetic regulator UHRF1 regulates its physical association with the deubiquitylase USP7 and stability. |
Volume: |
109 |
Issue: |
13 |
Pages: |
4828-33 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6382565 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2024-05-09 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3647427 |
Pattern: |
Regionally restricted |
Stage: |
TS27 |
Assay Id: |
MGI:7628312 |
Age: |
postnatal day 0 |
Image: |
S15B Control |
Note: |
Co-localization of expression with Usp7 in granulosa cells |
Specimen Label: |
S15B Control |
Detected: |
true |
Specimen Num: |
17 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6382565 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2024-05-09 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3647428 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:7628312 |
Age: |
postnatal day 7 |
Image: |
S15C Control |
Note: |
Co-localization of expression with Usp7 in granulosa cells |
Specimen Label: |
S15C Control |
Detected: |
true |
Specimen Num: |
19 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6382565 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2024-05-09 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3124727 |
Pattern: |
Regionally restricted |
Stage: |
TS27 |
Assay Id: |
MGI:7628312 |
Age: |
postnatal day 0 |
Image: |
S15B Sf1:Cretg/+;Usp7fl/fl |
Note: |
Co-localization of expression with Usp7 in granulosa cells |
Specimen Label: |
S15B Sf1:Cretg/+;Usp7fl/fl |
Detected: |
true |
Specimen Num: |
18 |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
MBD4 Interacts with and Recruits USP7 to heterochromatic foci. |
|
•
•
•
•
•
|
Publication |
First Author: |
Meng H |
Year: |
2015 |
Journal: |
J Cell Biochem |
Title: |
MBD4 interacts with and recruits USP7 to heterochromatic foci. |
Volume: |
116 |
Issue: |
3 |
Pages: |
476-85 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6382565 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2024-05-09 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3124728 |
Pattern: |
Regionally restricted |
Stage: |
TS28 |
Assay Id: |
MGI:7628312 |
Age: |
postnatal day 7 |
Image: |
S15C Sf1:Cretg/+;Usp7fl/fl |
Note: |
Co-localization of expression with Usp7 in granulosa cells arrested in primordial follicular stage. |
Specimen Label: |
S15C Sf1:Cretg/+;Usp7fl/fl |
Detected: |
true |
Specimen Num: |
20 |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
USP7 Is a Tumor-Specific WNT Activator for APC-Mutated Colorectal Cancer by Mediating -Catenin Deubiquitination. |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
USP7 regulates the proliferation and differentiation of ATDC5 cells through the Sox9-PTHrP-PTH1R axis. |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
USP7 represses lineage differentiation genes in mouse embryonic stem cells by both catalytic and noncatalytic activities. |
|
•
•
•
•
•
|
Allele |
Name: |
ubiquitin specific peptidase 7; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Conditional ready, No functional change |
|
•
•
•
•
•
|
Publication |
First Author: |
van Loosdregt J |
Year: |
2013 |
Journal: |
Immunity |
Title: |
Stabilization of the transcription factor Foxp3 by the deubiquitinase USP7 increases Treg-cell-suppressive capacity. |
Volume: |
39 |
Issue: |
2 |
Pages: |
259-71 |
|
•
•
•
•
•
|
Publication |
First Author: |
Novellasdemunt L |
Year: |
2017 |
Journal: |
Cell Rep |
Title: |
USP7 Is a Tumor-Specific WNT Activator for APC-Mutated Colorectal Cancer by Mediating β-Catenin Deubiquitination. |
Volume: |
21 |
Issue: |
3 |
Pages: |
612-627 |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Ataxin-1 (ATXN1) is involved in the formation and regulation of multimeric protein complexes within the nucleus []. It is the causative factor for spinocerebellar ataxia type 1 (SCA1), which manifests in poor co-ordination of hand and feet movement []. ATXN1 is a transcription repressor in the Notch signalling pathway []and colocalizes with the deubiquitinating enzyme USP7 in the nucleus []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
UVSSA is part of a UV-induced ubiquitinated protein complex involved in transcription-coupled nucleotide excision repair (TC-NER) in response to UV damage. It stabilise the TC-NER master organizing protein ERCC6 (also known as CSB) by delivering the deubiquitinating enzyme USP7 to TC-NER complexes []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Servadio A |
Year: |
1995 |
Journal: |
Nat Genet |
Title: |
Expression analysis of the ataxin-1 protein in tissues from normal and spinocerebellar ataxia type 1 individuals. |
Volume: |
10 |
Issue: |
1 |
Pages: |
94-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Davidson JD |
Year: |
2000 |
Journal: |
Hum Mol Genet |
Title: |
Identification and characterization of an ataxin-1-interacting protein: A1Up, a ubiquitin-like nuclear protein. |
Volume: |
9 |
Issue: |
15 |
Pages: |
2305-12 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tong X |
Year: |
2011 |
Journal: |
EMBO Rep |
Title: |
Ataxin-1 and Brother of ataxin-1 are components of the Notch signalling pathway. |
Volume: |
12 |
Issue: |
5 |
Pages: |
428-35 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry includes Ataxin1 and Ataxin1-like proteins. They are components of the Notch signalling pathway involved in transcriptional repression [].Ataxin-1 (ATXN1) is involved in the formation and regulation of multimeric protein complexes within the nucleus []. It is the causative factor for spinocerebellar ataxia type 1 (SCA1), which manifests in poor co-ordination of hand and feet movement []. ATXN1 is a transcription repressor in the Notch signalling pathway []and colocalizes with the deubiquitinating enzyme USP7 in the nucleus []. |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Publication |
First Author: |
Beringer M |
Year: |
2016 |
Journal: |
Mol Cell |
Title: |
EPOP Functionally Links Elongin and Polycomb in Pluripotent Stem Cells. |
Volume: |
64 |
Issue: |
4 |
Pages: |
645-658 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
369
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
In mouse embryonic stem cells (mESCs), the transcriptional network can be divided into three functionally distinct modules: Polycomb, Core, and Myc, and the Polycomb module represses developmental genes []. This family includes the polycomb repressive complex 2-associated factor EPOP (Elongin BC and Polycomb Repressive Complex 2 (PRC2) Associated Protein, also termed C17orf96, esPRC2p48, E130012A19Rik), a scaffold protein expressed in the inner cell mass of the mouse blastocyst serving as a bridging partner between the PRC2/EED-EZH2 complex and the elongin BC complex, and fine-tuning the transcriptional status of Polycomb group (PcG) target genes in embryonic stem cells. Both EPOP and Elongin BC are required to maintain low levels of expression at PRC2 genomic targets []. EPOP interacts with the H2B deubiquitinase USP7 to modulate transcriptional processes in mESCs similar to MYC [].Another member of the family is the uncharacterized SKI/DACH domain-containing protein 1. |
|
•
•
•
•
•
|
Publication |
First Author: |
Amici DR |
Year: |
2024 |
Journal: |
Life Sci Alliance |
Title: |
Tight regulation of a nuclear HAPSTR1-HUWE1 pathway essential for mammalian life. |
Volume: |
7 |
Issue: |
5 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Maat H |
Year: |
2021 |
Journal: |
iScience |
Title: |
The USP7-TRIM27 axis mediates non-canonical PRC1.1 function and is a druggable target in leukemia. |
Volume: |
24 |
Issue: |
5 |
Pages: |
102435 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cheron J |
Year: |
2023 |
Journal: |
Nat Commun |
Title: |
USP7/Maged1-mediated H2AÂ monoubiquitination in the paraventricular thalamus: an epigenetic mechanism involved in cocaine use disorder. |
Volume: |
14 |
Issue: |
1 |
Pages: |
8481 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wu Y |
Year: |
2023 |
Journal: |
Sci Adv |
Title: |
Metabolite asymmetric dimethylarginine (ADMA) functions as a destabilization enhancer of SOX9 mediated by DDAH1 in osteoarthritis. |
Volume: |
9 |
Issue: |
6 |
Pages: |
eade5584 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lu H |
Year: |
2023 |
Journal: |
Nat Commun |
Title: |
Angiotensin-converting enzyme inhibitor promotes angiogenesis through Sp1/Sp3-mediated inhibition of notch signaling in male mice. |
Volume: |
14 |
Issue: |
1 |
Pages: |
731 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang J |
Year: |
2020 |
Journal: |
EMBO Rep |
Title: |
The deubiquitinase USP44 promotes Treg function during inflammation by preventing FOXP3 degradation. |
Volume: |
21 |
Issue: |
9 |
Pages: |
e50308 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hu H |
Year: |
2023 |
Journal: |
Cell Rep |
Title: |
The RNA binding protein RALY suppresses p53 activity and promotes lung tumorigenesis. |
Volume: |
42 |
Issue: |
4 |
Pages: |
112288 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang P |
Year: |
2014 |
Journal: |
Nat Cell Biol |
Title: |
ATM-mediated stabilization of ZEB1 promotes DNA damage response and radioresistance through CHK1. |
Volume: |
16 |
Issue: |
9 |
Pages: |
864-75 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen H |
Year: |
2016 |
Journal: |
Biochim Biophys Acta |
Title: |
ATF4 regulates SREBP1c expression to control fatty acids synthesis in 3T3-L1 adipocytes differentiation. |
Volume: |
1859 |
Issue: |
11 |
Pages: |
1459-1469 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
37
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Barbeito P |
Year: |
2023 |
Journal: |
Front Cell Dev Biol |
Title: |
EVC-EVC2 complex stability and ciliary targeting are regulated by modification with ubiquitin and SUMO. |
Volume: |
11 |
|
Pages: |
1190258 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tacer KF |
Year: |
2017 |
Journal: |
Biochem J |
Title: |
Cellular and disease functions of the Prader-Willi Syndrome gene MAGEL2. |
Volume: |
474 |
Issue: |
13 |
Pages: |
2177-2190 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li C |
Year: |
2021 |
Journal: |
J Clin Invest |
Title: |
TRIP13 modulates protein deubiquitination and accelerates tumor development and progression of B cell malignancies. |
Volume: |
131 |
Issue: |
14 |
|
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
791
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
799
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
687
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
822
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
717
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
532
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
909
 |
Fragment?: |
false |
|
•
•
•
•
•
|