Type |
Details |
Score |
Publication |
First Author: |
Fischer von Mollard G |
Year: |
1998 |
Journal: |
J Biol Chem |
Title: |
A human homolog can functionally replace the yeast vesicle-associated SNARE Vti1p in two vesicle transport pathways. |
Volume: |
273 |
Issue: |
5 |
Pages: |
2624-30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jewell JL |
Year: |
2011 |
Journal: |
J Cell Biol |
Title: |
Munc18c phosphorylation by the insulin receptor links cell signaling directly to SNARE exocytosis. |
Volume: |
193 |
Issue: |
1 |
Pages: |
185-99 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wu SJ |
Year: |
2017 |
Journal: |
Cell Rep |
Title: |
A Critical Analysis of the Role of SNARE Protein SEC22B in Antigen Cross-Presentation. |
Volume: |
19 |
Issue: |
13 |
Pages: |
2645-2656 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nakajima K |
Year: |
2002 |
Journal: |
Mol Cell Biol |
Title: |
Molecular motor KIF1C is not essential for mouse survival and motor-dependent retrograde Golgi apparatus-to-endoplasmic reticulum transport. |
Volume: |
22 |
Issue: |
3 |
Pages: |
866-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
Advani RJ |
Year: |
1998 |
Journal: |
J Biol Chem |
Title: |
Seven novel mammalian SNARE proteins localize to distinct membrane compartments. |
Volume: |
273 |
Issue: |
17 |
Pages: |
10317-24 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang CC |
Year: |
2004 |
Journal: |
Dev Cell |
Title: |
A role of VAMP8/endobrevin in regulated exocytosis of pancreatic acinar cells. |
Volume: |
7 |
Issue: |
3 |
Pages: |
359-71 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kuliyev E |
Year: |
2018 |
Journal: |
J Neurosci |
Title: |
Overlapping Role of SCYL1 and SCYL3 in Maintaining Motor Neuron Viability. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Best D |
Year: |
2008 |
Journal: |
Development |
Title: |
Sdmg1 is a conserved transmembrane protein associated with germ cell sex determination and germline-soma interactions in mice. |
Volume: |
135 |
Issue: |
8 |
Pages: |
1415-25 |
|
•
•
•
•
•
|
Publication |
First Author: |
Richardson SC |
Year: |
2004 |
Journal: |
Mol Biol Cell |
Title: |
Mammalian late vacuole protein sorting orthologues participate in early endosomal fusion and interact with the cytoskeleton. |
Volume: |
15 |
Issue: |
3 |
Pages: |
1197-210 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pirooz SD |
Year: |
2014 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
UVRAG is required for virus entry through combinatorial interaction with the class C-Vps complex and SNAREs. |
Volume: |
111 |
Issue: |
7 |
Pages: |
2716-21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sharma M |
Year: |
2011 |
Journal: |
Nat Cell Biol |
Title: |
CSPα promotes SNARE-complex assembly by chaperoning SNAP-25 during synaptic activity. |
Volume: |
13 |
Issue: |
1 |
Pages: |
30-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hoffman BG |
Year: |
2008 |
Journal: |
Genome Biol |
Title: |
Identification of transcripts with enriched expression in the developing and adult pancreas. |
Volume: |
9 |
Issue: |
6 |
Pages: |
R99 |
|
•
•
•
•
•
|
Publication |
First Author: |
University of California, Davis |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by the University of California, Davis |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Ko MS |
Year: |
2000 |
Journal: |
Development |
Title: |
Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
Volume: |
127 |
Issue: |
8 |
Pages: |
1737-49 |
|
•
•
•
•
•
|
Publication |
First Author: |
Stryke D |
Year: |
2003 |
Journal: |
Nucleic Acids Res |
Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
Volume: |
31 |
Issue: |
1 |
Pages: |
278-81 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lennon G |
Year: |
1999 |
Journal: |
Database Download |
Title: |
WashU-HHMI Mouse EST Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Wellcome Trust Sanger Institute |
Year: |
2009 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
Year: |
2001 |
|
Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Skarnes WC |
Year: |
2011 |
Journal: |
Nature |
Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
Volume: |
474 |
Issue: |
7351 |
Pages: |
337-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
Vti1b promotes TRPV1 sensitization during inflammatory pain. |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
Syntaxin 6 and Vti1b form a novel SNARE complex, which is up-regulated in activated macrophages to facilitate exocytosis of tumor necrosis Factor-alpha. |
|
•
•
•
•
•
|
Publication |
First Author: |
Murray RZ |
Year: |
2005 |
Journal: |
J Biol Chem |
Title: |
Syntaxin 6 and Vti1b form a novel SNARE complex, which is up-regulated in activated macrophages to facilitate exocytosis of tumor necrosis Factor-alpha. |
Volume: |
280 |
Issue: |
11 |
Pages: |
10478-83 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
199
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Hirst J |
Year: |
2004 |
Journal: |
Mol Biol Cell |
Title: |
EpsinR is an adaptor for the SNARE protein Vti1b. |
Volume: |
15 |
Issue: |
12 |
Pages: |
5593-602 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lee JH |
Year: |
2012 |
Journal: |
PLoS One |
Title: |
Drosophila Tel2 is expressed as a translational fusion with EpsinR and is a regulator of wingless signaling. |
Volume: |
7 |
Issue: |
9 |
Pages: |
e46357 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shishido T |
Year: |
2014 |
Journal: |
Eur J Immunol |
Title: |
EpsinR, a target for pyrenocine B, role in endogenous MHC-II-restricted antigen presentation. |
Volume: |
44 |
Issue: |
11 |
Pages: |
3220-31 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Clathrin interactor 1 (CLINT1, also known as EpsinR) promotes Clathrin-coated vesicle formation at the trans-Golgi network and endosomes and thereby modulates Golgi-endosome trafficking []. It binds to the SNARE Protein vti1b []. Interestingly, one isoform of Drosophila EpsinR is a translational fusion with the only Tel2 coding sequences in Drosophila. In this fusion protein, Tel2 serves as a regulator of wingless signalling []. Human EpsinR is involved in endogenous MHC-II-restricted antigen presentation []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Pryor PR |
Year: |
2004 |
Journal: |
EMBO Rep |
Title: |
Combinatorial SNARE complexes with VAMP7 or VAMP8 define different late endocytic fusion events. |
Volume: |
5 |
Issue: |
6 |
Pages: |
590-5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Achuthan A |
Year: |
2008 |
Journal: |
Mol Cell Biol |
Title: |
Regulation of the endosomal SNARE protein syntaxin 7 by colony-stimulating factor 1 in macrophages. |
Volume: |
28 |
Issue: |
20 |
Pages: |
6149-59 |
|
•
•
•
•
•
|
Publication |
First Author: |
Prekeris R |
Year: |
1999 |
Journal: |
Mol Biol Cell |
Title: |
Differential roles of syntaxin 7 and syntaxin 8 in endosomal trafficking. |
Volume: |
10 |
Issue: |
11 |
Pages: |
3891-908 |
|
•
•
•
•
•
|
Publication |
First Author: |
Subramaniam VN |
Year: |
2000 |
Journal: |
J Cell Sci |
Title: |
Preferential association of syntaxin 8 with the early endosome. |
Volume: |
113 ( Pt 6) |
|
Pages: |
997-1008 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
Syntaxin 8 forms a complex with syntaxin 7 (Qa), Vti1b (Qb) and either VAMP7 or VAMP8 (R-SNARE) and is involved in the transport from early endosomes to the lysosome [, ]. Syntaxin 8 is a member of the Qc subgroup of SNARE (soluble N-ethylmaleimide-sensitive factor attachment protein receptor) proteins, which consist of coiled-coil helices (called SNARE motifs) that mediate the interactions between SNARE proteins, and a transmembrane domain []. The SNARE complexes mediate membrane fusion, important for trafficking of newly synthesized proteins, recycling of pre-existing proteins and organelle formation []. SNARE proteins are classified into four groups, Qa-, Qb-, Qc- and R-SNAREs, depending on whether the residue in the hydrophilic centre layer of the four-helical bundle is a glutamine (Q) or arginine (R). Qa-, as well as Qb- and Qc-SNAREs, are localized to target organelle membranes, while R-SNARE is localized to vesicle membranes. They form unique complexes consisting of one member of each subgroup, that mediate fusion between a specific type of vesicles and their target organelle []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Sender V |
Year: |
2013 |
Journal: |
PLoS One |
Title: |
Surfactant protein-A modulates LPS-induced TLR4 localization and signaling via β-arrestin 2. |
Volume: |
8 |
Issue: |
3 |
Pages: |
e59896 |
|
•
•
•
•
•
|
Publication |
First Author: |
Antonin W |
Year: |
2002 |
Journal: |
Nat Struct Biol |
Title: |
Crystal structure of the endosomal SNARE complex reveals common structural principles of all SNAREs. |
Volume: |
9 |
Issue: |
2 |
Pages: |
107-11 |
|
•
•
•
•
•
|
Publication |
First Author: |
Teng FY |
Year: |
2001 |
Journal: |
Genome Biol |
Title: |
The syntaxins. |
Volume: |
2 |
Issue: |
11 |
Pages: |
REVIEWS3012 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
236
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
631
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
623
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
623
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
641
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
623
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Fasshauer D |
Year: |
1998 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Conserved structural features of the synaptic fusion complex: SNARE proteins reclassified as Q- and R-SNAREs. |
Volume: |
95 |
Issue: |
26 |
Pages: |
15781-6 |
|
•
•
•
•
•
|