Type |
Details |
Score |
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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•
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•
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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•
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•
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Publication |
First Author: |
Rezende RM |
Year: |
2019 |
Journal: |
J Immunol |
Title: |
γδ T Cell-Secreted XCL1 Mediates Anti-CD3-Induced Oral Tolerance. |
Volume: |
203 |
Issue: |
10 |
Pages: |
2621-2629 |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
114
 |
Fragment?: |
false |
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•
•
•
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Publication |
First Author: |
Sánchez-Paulete AR |
Year: |
2018 |
Journal: |
Cancer Res |
Title: |
Intratumoral Immunotherapy with XCL1 and sFlt3L Encoded in Recombinant Semliki Forest Virus-Derived Vectors Fosters Dendritic Cell-Mediated T-cell Cross-Priming. |
Volume: |
78 |
Issue: |
23 |
Pages: |
6643-6654 |
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•
•
•
•
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Publication |
First Author: |
Lei Y |
Year: |
2012 |
Journal: |
Microbes Infect |
Title: |
XCL1 and XCR1 in the immune system. |
Volume: |
14 |
Issue: |
3 |
Pages: |
262-7 |
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•
•
•
•
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Publication |
First Author: |
Xu F |
Year: |
2019 |
Journal: |
Dev Comp Immunol |
Title: |
Genetic diversity of chemokine XCL1 and its receptor XCR1 in murine rodents. |
Volume: |
98 |
|
Pages: |
80-88 |
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Allele |
Name: |
chemokine (C motif) ligand 1; endonuclease-mediated mutation 2, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
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Strain |
Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
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Allele |
Name: |
chemokine (C motif) ligand 1; targeted mutation 1, Centre d'ImmunoPhenomique |
Allele Type: |
Targeted |
Attribute String: |
Reporter |
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•
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Publication |
First Author: |
Lokwani R |
Year: |
2024 |
Journal: |
Nat Mater |
Title: |
Pro-regenerative biomaterials recruit immunoregulatory dendritic cells after traumatic injury. |
Volume: |
23 |
Issue: |
1 |
Pages: |
147-157 |
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•
•
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•
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Publication |
First Author: |
First NJ |
Year: |
2023 |
Journal: |
Cell Rep |
Title: |
Bordetella spp. block eosinophil recruitment to suppress the generation of early mucosal protection. |
Volume: |
42 |
Issue: |
11 |
Pages: |
113294 |
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•
•
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•
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Publication |
First Author: |
Yoshida T |
Year: |
1996 |
Journal: |
FEBS Lett |
Title: |
Structure and expression of two highly related genes encoding SCM-1/human lymphotactin. |
Volume: |
395 |
Issue: |
1 |
Pages: |
82-8 |
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•
•
•
•
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Publication |
First Author: |
Fox JC |
Year: |
2015 |
Journal: |
Cytokine |
Title: |
Structural and agonist properties of XCL2, the other member of the C-chemokine subfamily. |
Volume: |
71 |
Issue: |
2 |
Pages: |
302-11 |
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•
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Publication |
First Author: |
Geyer H |
Year: |
2014 |
Journal: |
J Virol |
Title: |
Cytomegalovirus expresses the chemokine homologue vXCL1 capable of attracting XCR1+ CD4- dendritic cells. |
Volume: |
88 |
Issue: |
1 |
Pages: |
292-302 |
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Protein Domain |
Type: |
Family |
Description: |
Chemokines (chemotactic cytokines) are a family of chemoattractant molecules. They attract leukocytes to areas of inflammation and lesions, and play a key role in leukocyte activation. Originally defined as host defense proteins, chemokines are now known to play a much broader biological role []. They have a wide range of effects in many different cell types beyond the immune system, including, for example, various cells of the central nervous system [], and endothelial cells, where they may act as either angiogenic or angiostatic factors [].The chemokine family is divided into four classes based on the number and spacing of their conserved cysteines: 2 Cys residues may be adjacent (the CC family); separated by an intervening residue (the CXC family); have only one of the first two Cys residues (C chemokines); or contain both cysteines, separated by three intervening residues (CX3C chemokines).Chemokines exert their effects by binding to rhodopsin-like G protein-coupled receptors on the surface of cells. Following interaction with their specific chemokine ligands, chemokine receptors trigger a flux in intracellular calcium ions, which cause a cellular response, including the onset of chemotaxis. There are over fifty distinct chemokines and least 18 human chemokine receptors []. Although the receptors bind only a single class of chemokines, they often bind several members of the same class with high affinity. Chemokine receptors are preferentially expressed on important functional subsets of dendritic cells, monocytes and lymphocytes, including Langerhans cells and T helpercells [, ]. Chemokines and their receptors can also be subclassified into homeostatic leukocyte homing molecules (CXCR4, CXCR5, CCR7, CCR9) versus inflammatory/inducible molecules (CXCR1, CXCR2, CXCR3, CCR1-6, CX3CR1).The C chemokine subfamily is composed of two members, XC chemokine ligand 1 (XCL1), also known as lymphotactin or SCM-1 alpha, and XC chemokine ligand 2 (XCL2), also known as SCM-1 beta []. The cognate receptor for these chemokines is XCR1 [].XCL1 is an inflammatory chemokine that produced by activated CD8+ T cells and natural killer cells. It is involved in the mediation of interactions between antigen-presenting dendritic cells and T-cells, and induction of CD8+ effector T-cell responses [, ]. It is also involved in the formation of self-tolerance mechanisms through the development of T regulatory cells within the thymus []. Less is known about its closely related paralogue XCL2, although the in vitro functional profiles are virtually identical []. Human XCL2 and XCL1 amino acid sequences differ at only two positions near the N terminus [].Viral XCL1 (vXCL1) exclusively binds to CD4(-) rat dendritic cells (DC), a subset of DC that express the corresponding chemokine receptor XCR1, a strategy to subvert cytotoxic immune responses []. |
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Publication |
First Author: |
Chen SR |
Year: |
2015 |
Journal: |
Oncotarget |
Title: |
Loss of Gata4 in Sertoli cells impairs the spermatogonial stem cell niche and causes germ cell exhaustion by attenuating chemokine signaling. |
Volume: |
6 |
Issue: |
35 |
Pages: |
37012-27 |
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Publication |
First Author: |
Crozat K |
Year: |
2010 |
Journal: |
J Exp Med |
Title: |
The XC chemokine receptor 1 is a conserved selective marker of mammalian cells homologous to mouse CD8alpha+ dendritic cells. |
Volume: |
207 |
Issue: |
6 |
Pages: |
1283-92 |
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•
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Publication |
First Author: |
Bonnavion R |
Year: |
2023 |
Journal: |
Front Pharmacol |
Title: |
Large chemokine binding spectrum of human and mouse atypical chemokine receptor GPR182 (ACKR5). |
Volume: |
14 |
|
Pages: |
1297596 |
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•
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•
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Publication |
First Author: |
Davenport B |
Year: |
2020 |
Journal: |
J Immunol |
Title: |
Chemokine Signatures of Pathogen-Specific T Cells II: Memory T Cells in Acute and Chronic Infection. |
Volume: |
205 |
Issue: |
8 |
Pages: |
2188-2206 |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
114
 |
Fragment?: |
false |
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•
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•
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Publication |
First Author: |
Ma Q |
Year: |
1998 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Impaired B-lymphopoiesis, myelopoiesis, and derailed cerebellar neuron migration in CXCR4- and SDF-1-deficient mice. |
Volume: |
95 |
Issue: |
16 |
Pages: |
9448-53 |
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•
•
•
•
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Publication |
First Author: |
Horuk R |
Year: |
2001 |
Journal: |
Cytokine Growth Factor Rev |
Title: |
Chemokine receptors. |
Volume: |
12 |
Issue: |
4 |
Pages: |
313-35 |
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•
•
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•
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Publication |
First Author: |
Charbonnier AS |
Year: |
1999 |
Journal: |
J Exp Med |
Title: |
Macrophage inflammatory protein 3alpha is involved in the constitutive trafficking of epidermal langerhans cells. |
Volume: |
190 |
Issue: |
12 |
Pages: |
1755-68 |
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•
•
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•
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Publication |
First Author: |
Sallusto F |
Year: |
1998 |
Journal: |
J Exp Med |
Title: |
Flexible programs of chemokine receptor expression on human polarized T helper 1 and 2 lymphocytes. |
Volume: |
187 |
Issue: |
6 |
Pages: |
875-83 |
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•
•
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•
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Publication |
First Author: |
Strieter RM |
Year: |
1995 |
Journal: |
J Biol Chem |
Title: |
The functional role of the ELR motif in CXC chemokine-mediated angiogenesis. |
Volume: |
270 |
Issue: |
45 |
Pages: |
27348-57 |
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•
•
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•
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Publication |
First Author: |
Zlotnik A |
Year: |
2000 |
Journal: |
Immunity |
Title: |
Chemokines: a new classification system and their role in immunity. |
Volume: |
12 |
Issue: |
2 |
Pages: |
121-7 |
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•
•
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•
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Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
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•
•
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•
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Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
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•
•
•
•
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Publication |
First Author: |
Carninci P |
Year: |
2000 |
Journal: |
Genome Res |
Title: |
Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. |
Volume: |
10 |
Issue: |
10 |
Pages: |
1617-30 |
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Publication |
First Author: |
Carninci P |
Year: |
1999 |
Journal: |
Methods Enzymol |
Title: |
High-efficiency full-length cDNA cloning. |
Volume: |
303 |
|
Pages: |
19-44 |
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•
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Publication |
First Author: |
Shibata K |
Year: |
2000 |
Journal: |
Genome Res |
Title: |
RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. |
Volume: |
10 |
Issue: |
11 |
Pages: |
1757-71 |
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•
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Publication |
First Author: |
Katayama S |
Year: |
2005 |
Journal: |
Science |
Title: |
Antisense transcription in the mammalian transcriptome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1564-6 |
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