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Search results 1101 to 1200 out of 1398 for H2ax

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Type Details Score
Publication
- | J:346132
       
First Author: The Gene Ontology Consortium
Year: 2016
Title: Automatic assignment of GO terms using logical inference, based on on inter-ontology links
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Publication
34321999 | J:313619
 
First Author: Bedogni F
Year: 2021
Journal: Front Mol Neurosci
Title: Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development.
Volume: 14
Pages: 686034
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Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
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Publication
- | J:155856
       
First Author: The Gene Ontology Consortium
Year: 2014
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs
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Publication
- | J:72247
       
First Author: DDB, FB, MGI, GOA, ZFIN curators
Year: 2001
Title: Gene Ontology annotation through association of InterPro records with GO terms
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
- | J:326541
       
First Author: Cyagen Biosciences Inc.
Year: 2022
Title: Cyagen Biosciences Website.
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
21267068 | J:153498
First Author: Diez-Roux G
Year: 2011
Journal: PLoS Biol
Title: A high-resolution anatomical atlas of the transcriptome in the mouse embryo.
Volume: 9
Issue: 1
Pages: e1000582
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
25979708 | J:223996
First Author: Broering TJ
Year: 2015
Journal: Biol Open
Title: BAZ1B is dispensable for H2AX phosphorylation on Tyrosine 142 during spermatogenesis.
Volume: 4
Issue: 7
Pages: 873-84
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Publication
17363589 | J:120316
First Author: Liu Y
Year: 2007
Journal: Cancer Res
Title: Histone H2AX is a mediator of gastrointestinal stromal tumor cell apoptosis following treatment with imatinib mesylate.
Volume: 67
Issue: 6
Pages: 2685-92
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Publication
25202016 | J:217760
First Author: Wang L
Year: 2014
Journal: J Biol Chem
Title: Osmotic stress-induced phosphorylation of H2AX by polo-like kinase 3 affects cell cycle progression in human corneal epithelial cells.
Volume: 289
Issue: 43
Pages: 29827-35
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Publication
21511815 | J:173759
First Author: Jakob B
Year: 2011
Journal: Nucleic Acids Res
Title: DNA double-strand breaks in heterochromatin elicit fast repair protein recruitment, histone H2AX phosphorylation and relocation to euchromatin.
Volume: 39
Issue: 15
Pages: 6489-99
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Publication
23035256 | J:195900
First Author: Blanco-Rodríguez J
Year: 2012
Journal: Reproduction
Title: Programmed phosphorylation of histone H2AX precedes a phase of DNA double-strand break-independent synapsis in mouse meiosis.
Volume: 144
Issue: 6
Pages: 699-712
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Interaction Experiment
Turner JM (2004)
Description: BRCA1, histone H2AX phosphorylation, and male meiotic sex chromosome inactivation.
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Interaction Experiment
Burma S (2001)
Description: ATM phosphorylates histone H2AX in response to DNA double-strand breaks.
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Publication
18344416 | J:136629
First Author: Kulkarni A
Year: 2008
Journal: Am J Physiol Lung Cell Mol Physiol
Title: Differential roles of ATR and ATM in p53, Chk1, and histone H2AX phosphorylation in response to hyperoxia: ATR-dependent ATM activation.
Volume: 294
Issue: 5
Pages: L998-L1006
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Publication
31811168 | J:287171
First Author: Álvarez-Lindo N
Year: 2019
Journal: Sci Rep
Title: RAG-2 deficiency results in fewer phosphorylated histone H2AX foci, but increased retinal ganglion cell death and altered axonal growth.
Volume: 9
Issue: 1
Pages: 18486
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Publication
26717153 | -
First Author: Rosales KR
Year: 2015
Journal: PLoS One
Title: TIPRL Inhibits Protein Phosphatase 4 Activity and Promotes H2AX Phosphorylation in the DNA Damage Response.
Volume: 10
Issue: 12
Pages: e0145938
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Interaction Experiment
Celeste A (2003)
Description: Histone H2AX phosphorylation is dispensable for the initial recognition of DNA breaks.
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Interaction Experiment
Bogliolo M (2007)
Description: Histone H2AX and Fanconi anemia FANCD2 function in the same pathway to maintain chromosome stability.
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Publication
17145805 | -
First Author: Zykova TA
Year: 2006
Journal: Clin Cancer Res
Title: Lymphokine-activated killer T-cell-originated protein kinase phosphorylation of histone H2AX prevents arsenite-induced apoptosis in RPMI7951 melanoma cells.
Volume: 12
Issue: 23
Pages: 6884-93
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GXD Expression
GXD Expression
Probe: MGI:6400554
Assay Type: Immunohistochemistry
Annotation Date: 2020-03-20
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3284220
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:6400724
Age: embryonic day 12.5
Image: 4F right
Note: Expression was detected in neurons in the mutant pallium. There was virtually no co-expression with H2ax (5.1%).
Specimen Label: 4F right
Detected: true
Specimen Num: 7
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GO Term
GO:0140793 | histone H2AXY142 phosphatase activity
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GO Term
GO:0140791 | histone H2AXS140 phosphatase activity
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Publication
11673449 | -
First Author: Ward IM
Year: 2001
Journal: J Biol Chem
Title: Histone H2AX is phosphorylated in an ATR-dependent manner in response to replicational stress.
Volume: 276
Issue: 51
Pages: 47759-62
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Publication
18285460 | -
First Author: Jha S
Year: 2008
Journal: Mol Cell Biol
Title: Human Rvb1/Tip49 is required for the histone acetyltransferase activity of Tip60/NuA4 and for the downregulation of phosphorylation on H2AX after DNA damage.
Volume: 28
Issue: 8
Pages: 2690-700
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GO Term
GO:0070531 | BRCA1-A complex
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Publication
7217105 | -
First Author: Pantazis P
Year: 1981
Journal: J Biol Chem
Title: Quantitative determination of histone modification. H2A acetylation and phosphorylation.
Volume: 256
Issue: 9
Pages: 4669-75
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Protein
Q8BH58
Organism: Mus musculus/domesticus
Length: 271  
Fragment?: false
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Protein
A0A0A6YY87
Organism: Mus musculus/domesticus
Length: 47  
Fragment?: true
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Protein Domain
IPR007303 | TIP41-like
Type: Family
Description: In budding yeast, TIP41 interacts with TAP42 to regulate protein phosphatase activity []. In mammalian cells, TIP41-like protein (TIPRL) does not directly bind TAP42, but rather primarily interacts with PP2A, PP4 or PP6 catalytic subunits. TIPRL inhibits PP4 activity to allow for H2AX phosphorylation and the subsequent DNA damage response [].
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Protein Coding Gene
MGI:1261847 | Vrk1
Type: protein_coding_gene
Organism: mouse, laboratory
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Publication
20725033 | -
First Author: Nakada S
Year: 2010
Journal: Nature
Title: Non-canonical inhibition of DNA damage-dependent ubiquitination by OTUB1.
Volume: 466
Issue: 7309
Pages: 941-6
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Publication
20725029 | -
First Author: Rose A
Year: 2010
Journal: Nature
Title: DNA repair: Blocking ubiquitin transfer.
Volume: 466
Issue: 7309
Pages: 929-30
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Publication
21874000 | -
First Author: Testa JR
Year: 2011
Journal: Nat Genet
Title: Germline BAP1 mutations predispose to malignant mesothelioma.
Volume: 43
Issue: 10
Pages: 1022-5
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Protein Domain
IPR030298 | OTUB1
Type: Family
Description: OTUB1 (also known as otubain-1) is a deubiquitinating enzyme that belongs to the OTU family of cysteine proteases []. OTUB1 can specifically remove 'Lys-48'-linked conjugated ubiquitin from proteins and plays an important regulatory role at the level of protein turnover by preventing degradation []. It also plays a key non-catalytic role in DNA repair regulation by inhibiting activity of RNF168, an E3 ubiquitin-protein ligase that promotes accumulation of 'Lys-63'-linked histone H2A and H2AX at DNA damage sites [, ]. Mutations in OTUB1 cause tumour predisposition syndrome (TPDS), characterised by predisposition to develop a variety of tumours [].
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Protein Coding Gene
MGI:1915131 | Mdp1
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1914696 | Dusp28
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:7470874 | Dusp13a
Type: protein_coding_gene
Organism: mouse, laboratory
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Publication
19005492 | J:143087
First Author: Bonner WM
Year: 2008
Journal: Nat Rev Cancer
Title: GammaH2AX and cancer.
Volume: 8
Issue: 12
Pages: 957-67
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HT Experiment
E-GEOD-60414 | Potentiation of neurotoxicity in double mutant mice with Pink1 ablation and A53T-SNCA overexpression
Series Id: GSE60414
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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Publication
24075985 | J:203788
First Author: Zheng H
Year: 2013
Journal: Cell Rep
Title: A BRISC-SHMT complex deubiquitinates IFNAR1 and regulates interferon responses.
Volume: 5
Issue: 1
Pages: 180-93
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Protein
Q8K3W0
Organism: Mus musculus/domesticus
Length: 383  
Fragment?: false
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Protein
D3Z7P0
Organism: Mus musculus/domesticus
Length: 385  
Fragment?: false
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Protein
A0A0J9YV56
Organism: Mus musculus/domesticus
Length: 63  
Fragment?: true
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Protein
E9Q0U3
Organism: Mus musculus/domesticus
Length: 205  
Fragment?: false
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Protein
E9Q8Q1
Organism: Mus musculus/domesticus
Length: 43  
Fragment?: false
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Protein
A0A1D5RM60
Organism: Mus musculus/domesticus
Length: 114  
Fragment?: true
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Publication
25283148 | -
 
First Author: Zhang J
Year: 2014
Journal: Nat Commun
Title: ABRO1 suppresses tumourigenesis and regulates the DNA damage response by stabilizing p53.
Volume: 5
Pages: 5059
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Publication
19261746 | -
First Author: Shao G
Year: 2009
Journal: Genes Dev
Title: MERIT40 controls BRCA1-Rap80 complex integrity and recruitment to DNA double-strand breaks.
Volume: 23
Issue: 6
Pages: 740-54
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Publication
20622899 | -
First Author: Hu F
Year: 2010
Journal: Oncogene
Title: PBK/TOPK interacts with the DBD domain of tumor suppressor p53 and modulates expression of transcriptional targets including p21.
Volume: 29
Issue: 40
Pages: 5464-74
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Publication
19900192 | -
First Author: Park JH
Year: 2010
Journal: Cancer Sci
Title: Critical roles of T-LAK cell-originated protein kinase in cytokinesis.
Volume: 101
Issue: 2
Pages: 403-11
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Publication
27898655 | -
First Author: Ohashi T
Year: 2017
Journal: Br J Cancer
Title: Overexpression of PBK/TOPK relates to tumour malignant potential and poor outcome of gastric carcinoma.
Volume: 116
Issue: 2
Pages: 218-226
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Publication
17160018 | -
First Author: Ayllón V
Year: 2007
Journal: Oncogene
Title: PBK/TOPK promotes tumour cell proliferation through p38 MAPK activity and regulation of the DNA damage response.
Volume: 26
Issue: 24
Pages: 3451-61
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Protein Domain
IPR026126 | BABAM1
Type: Family
Description: BRISC and BRCA1-A complex member 1 (BABAM1, also known as MERIT40 and NBA1) was initially identified as a gene required for resistance to ionizing radiation []. It is a component of the BRCA1-A complex, which also contains Brca1/Bard1, Abra1, RAP80, BRCC36, and BRE []. The BRCA1-A complex recognises 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the brca1-bard1 heterodimer to sites of DNA damage at double-strand breaks (DSBs), facilitating DNA damage repair. The BRCA1-A complex is also involved in G2/M transition DNA damage checkpoint control. BABAM1 may also play a role as a component of the BRISC complex (contains the FAM175B/ABRO1, BRCC3/BRCC36, BRE/BRCC45 and MERIT40/NBA1 proteins), a multiprotein complex that specifically cleaves 'Lys-63'-linked ubiquitin. In these 2 complexes, BABAM1 is probably required to maintain the stability of BRE/BRCC45 and help the 'Lys-63'-linked deubiquitinase activity mediated by BRCC3/BRCC36 component [, ].
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Protein Domain
IPR041989 | PKc_TOPK
Type: Domain
Description: This entry represents the catalytic domain found in TOPK, which belongs to a superfamily that contains other protein kinases, such as RIO kinases, aminoglycoside phosphotransferase, choline kinase and phosphoinositide 3-kinase.Lymphokine-activated killer T-cell-originated protein kinase (TOPK), also called PDZ-binding kinase (PBK), is activated at the early stage of mitosis and plays a critical role in cytokinesis []. It partly functions as a mitogen-activated protein kinase (MAPK) kinase and is capable of phosphorylating p38, JNK1, and ERK2. TOPK also plays a role in DNA damage sensing and repair through its phosphorylation of histone H2AX [, ]. It contributes to cancer development and progression by downregulating the function of tumour suppressor p53 and reducing cell-cycle regulatory proteins [, ].
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Protein Domain
IPR010358 | BRE
Type: Family
Description: Brain and reproductive organ-expressed (BRE, also known as BRCC45) is a component of the BRCA1-A complex, a complex that specifically recognises 'Lys-63'-linked ubiquitinated histones H2A and H2AX at DNA lesions sites, leading to target the BRCA1-BARD1 heterodimer to sites of DNA damage at double-strand breaks (DSBs) []. It acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integrity and modulating the E3 ubiquitin ligase activity of the BRCA1-BARD1 heterodimer [, ]. It is also part of the BRISC complex, a multiprotein complex that specifically cleaves 'Lys-63'-linked ubiquitin in various substrates [, , , ]. Within the BRISC complex, it acts as an adapter that bridges the interaction between BABAM1/NBA1 and the rest of the complex, thereby being required for the complex integrity [].
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Publication
19261748 | -
First Author: Feng L
Year: 2009
Journal: Genes Dev
Title: MERIT40 facilitates BRCA1 localization and DNA damage repair.
Volume: 23
Issue: 6
Pages: 719-28
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Protein Coding Gene
MGI:1927168 | Dusp14
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1351599 | Dusp13b
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1913711 | Ptpmt1
Type: protein_coding_gene
Organism: mouse, laboratory
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Publication
17961556 | J:127742
First Author: Garcia SN
Year: 2007
Journal: FEBS Lett
Title: Mrg15 null and heterozygous mouse embryonic fibroblasts exhibit DNA-repair defects post exposure to gamma ionizing radiation.
Volume: 581
Issue: 27
Pages: 5275-81
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Protein Coding Gene
MGI:108410 | Ptpn18
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:97809 | Ptprb
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:87881 | Acp1
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1344406 | Ptpn21
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1914328 | Pgp
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1890614 | Dusp12
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1915690 | Dusp23
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:3647127 | Dusp29
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1919641 | Cdkn3
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1915297 | Mpnd
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:2683546 | Ssh3
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:101911 | Dusp2
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1934928 | Dusp15
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:106626 | Dusp8
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:2387100 | Dusp7
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1099792 | Ptpn4
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:2156893 | Ptpn7
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1196295 | Ptpn20
Type: protein_coding_gene
Organism: mouse, laboratory
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Protein Coding Gene
MGI:1277117 | Ptp4a2
Type: protein_coding_gene
Organism: mouse, laboratory
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom