Type |
Details |
Score |
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
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•
•
•
•
•
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Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
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•
•
•
•
•
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Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
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•
•
•
•
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Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
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•
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Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
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•
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•
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Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
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Title: |
GemPharmatech Website. |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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•
•
•
•
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Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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•
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Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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•
•
•
•
•
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Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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•
•
•
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Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
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•
•
•
•
•
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Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
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•
•
•
•
•
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Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
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Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
•
•
•
•
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Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
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•
•
•
•
•
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
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•
•
•
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•
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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•
•
•
•
•
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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•
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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•
•
•
•
•
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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•
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DO Term |
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DO Term |
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Publication |
First Author: |
Valadan R |
Year: |
2015 |
Journal: |
Anal Biochem |
Title: |
Pseudogene-free amplification of HPRT1 in quantitative reverse transcriptase polymerase chain reaction. |
Volume: |
485 |
|
Pages: |
46-8 |
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•
•
•
•
•
|
Allele |
Name: |
hypoxanthine phosphoribosyltransferase 1; hypoxanthine guanine phosphoribosyl transferase B, mutation 3 |
Allele Type: |
Spontaneous |
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•
•
•
•
•
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Allele |
Name: |
excision repair cross-complementing rodent repair deficiency, complementation group 1; targeted mutation 2, David W Melton |
Allele Type: |
Targeted |
Attribute String: |
Conditional ready, No functional change |
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•
•
•
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•
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Publication |
First Author: |
Henssen AG |
Year: |
2017 |
Journal: |
Nat Genet |
Title: |
PGBD5 promotes site-specific oncogenic mutations in human tumors. |
Volume: |
49 |
Issue: |
7 |
Pages: |
1005-1014 |
|
•
•
•
•
•
|
Publication |
First Author: |
Henssen AG |
Year: |
2016 |
Journal: |
BMC Genomics |
Title: |
Forward genetic screen of human transposase genomic rearrangements. |
Volume: |
17 |
|
Pages: |
548 |
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•
•
•
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•
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Protein Domain |
Type: |
Family |
Description: |
PiggyBac transposable element-derived protein 5 (PGBD5) is a DNA transposase that mediates PGBD5-induced DNA rearrangements in rhabdoid tumour cells []. It can induce genomic rearrangements that inactivate the HPRT1 gene []. |
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•
•
•
•
•
|
Genotype |
Symbol: |
Hprt1/? |
Background: |
B6.129P2-Hprt1 |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Hprt1/Hprt1 |
Background: |
B6.129P2-Hprt1 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
523
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
409
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
132
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
432
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
human |
|
•
•
•
•
•
|
Allele |
Name: |
ocular degeneration with sex reversal; targeted mutation 1, Colin E Bishop |
Allele Type: |
Targeted |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Ataei Ataabadi E |
Year: |
2021 |
Journal: |
Oxid Med Cell Longev |
Title: |
Vascular Ageing Features Caused by Selective DNA Damage in Smooth Muscle Cell. |
Volume: |
2021 |
|
Pages: |
2308317 |
|
•
•
•
•
•
|
Allele |
Name: |
hypoxanthine phosphoribosyltransferase 1; targeted mutation 1, Alan Peterson |
Allele Type: |
Targeted |
Attribute String: |
Inserted expressed sequence |
|
•
•
•
•
•
|
Allele |
Name: |
hypoxanthine phosphoribosyltransferase 1; targeted mutation 2, Alan Peterson |
Allele Type: |
Targeted |
Attribute String: |
Inserted expressed sequence |
|
•
•
•
•
•
|
Allele |
Name: |
hypoxanthine phosphoribosyltransferase 1; targeted mutation 3, Alan Peterson |
Allele Type: |
Targeted |
Attribute String: |
Inserted expressed sequence |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Ods/Ods |
Background: |
either: 129S7/SvEvBrd or (involves: 129S7/SvEvBrd * FVB/N) |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Kirschner K |
Year: |
2007 |
Journal: |
DNA Repair (Amst) |
Title: |
Characterisation of Ercc1 deficiency in the liver and in conditional Ercc1-deficient primary hepatocytes in vitro. |
Volume: |
6 |
Issue: |
3 |
Pages: |
304-16 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jokić M |
Year: |
2016 |
Journal: |
Mol Cancer Res |
Title: |
Ercc1 Deficiency Promotes Tumorigenesis and Increases Cisplatin Sensitivity in a Tp53 Context-Specific Manner. |
Volume: |
14 |
Issue: |
11 |
Pages: |
1110-1123 |
|
•
•
•
•
•
|
Publication |
First Author: |
Borgesius NZ |
Year: |
2011 |
Journal: |
J Neurosci |
Title: |
Accelerated age-related cognitive decline and neurodegeneration, caused by deficient DNA repair. |
Volume: |
31 |
Issue: |
35 |
Pages: |
12543-53 |
|
•
•
•
•
•
|
Publication |
First Author: |
Doig J |
Year: |
2006 |
Journal: |
Oncogene |
Title: |
Mice with skin-specific DNA repair gene (Ercc1) inactivation are hypersensitive to ultraviolet irradiation-induced skin cancer and show more rapid actinic progression. |
Volume: |
25 |
Issue: |
47 |
Pages: |
6229-38 |
|
•
•
•
•
•
|
Publication |
First Author: |
de Graaf EL |
Year: |
2013 |
Journal: |
Mol Cell Proteomics |
Title: |
Spatio-temporal analysis of molecular determinants of neuronal degeneration in the aging mouse cerebellum. |
Volume: |
12 |
Issue: |
5 |
Pages: |
1350-62 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lawrence NJ |
Year: |
2009 |
Journal: |
DNA Repair (Amst) |
Title: |
Topical thymidine dinucleotide application protects against UVB-induced skin cancer in mice with DNA repair gene (Ercc1)-deficient skin. |
Volume: |
8 |
Issue: |
5 |
Pages: |
664-71 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang X |
Year: |
2021 |
Journal: |
Glia |
Title: |
Intrinsic DNA damage repair deficiency results in progressive microglia loss and replacement. |
Volume: |
69 |
Issue: |
3 |
Pages: |
729-745 |
|
•
•
•
•
•
|
Publication |
First Author: |
Qin Y |
Year: |
2004 |
Journal: |
Hum Mol Genet |
Title: |
Long-range activation of Sox9 in Odd Sex (Ods) mice. |
Volume: |
13 |
Issue: |
12 |
Pages: |
1213-8 |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Ercc1/Ercc1 Hr /Hr Tg(KRT5-cre)5132Jlj/? |
Background: |
involves: 129P2/OlaHsd * C57BL/6J * DBA/2J * MF1 |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Champagne DP |
Year: |
2014 |
Journal: |
Mutat Res |
Title: |
Illegitimate V(D)J recombination-mediated deletions in Notch1 and Bcl11b are not sufficient for extensive clonal expansion and show minimal age or sex bias in frequency or junctional processing. |
Volume: |
761 |
|
Pages: |
34-48 |
|
•
•
•
•
•
|
Publication |
First Author: |
Selfridge J |
Year: |
2010 |
Journal: |
DNA Repair (Amst) |
Title: |
Mice with DNA repair gene Ercc1 deficiency in a neural crest lineage are a model for late-onset Hirschsprung disease. |
Volume: |
9 |
Issue: |
6 |
Pages: |
653-60 |
|
•
•
•
•
•
|
Publication |
First Author: |
Van't Sant LJ |
Year: |
2021 |
Journal: |
Acta Neuropathol Commun |
Title: |
In vivo 5-ethynyluridine (EU) labelling detects reduced transcription in Purkinje cell degeneration mouse mutants, but can itself induce neurodegeneration. |
Volume: |
9 |
Issue: |
1 |
Pages: |
94 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jaarsma D |
Year: |
2024 |
Journal: |
Neurobiol Dis |
Title: |
Different Purkinje cell pathologies cause specific patterns of progressive gait ataxia in mice. |
Volume: |
192 |
|
Pages: |
106422 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lawrence NJ |
Year: |
2008 |
Journal: |
DNA Repair (Amst) |
Title: |
A neurological phenotype in mice with DNA repair gene Ercc1 deficiency. |
Volume: |
7 |
Issue: |
2 |
Pages: |
281-91 |
|
•
•
•
•
•
|
Publication |
First Author: |
Birkisdóttir MB |
Year: |
2022 |
Journal: |
Front Aging Neurosci |
Title: |
Purkinje-cell-specific DNA repair-deficient mice reveal that dietary restriction protects neurons by cell-intrinsic preservation of genomic health. |
Volume: |
14 |
|
Pages: |
1095801 |
|
•
•
•
•
•
|
Publication |
First Author: |
Raj DD |
Year: |
2014 |
Journal: |
Neurobiol Aging |
Title: |
Priming of microglia in a DNA-repair deficient model of accelerated aging. |
Volume: |
35 |
Issue: |
9 |
Pages: |
2147-60 |
|
•
•
•
•
•
|