| Type |
Details |
Score |
| Publication |
| First Author: |
Meng G |
| Year: |
2014 |
| Journal: |
Tumour Biol |
| Title: |
Epigenetic silencing of methyl-CpG-binding protein 2 gene affects proliferation, invasion, migration, and apoptosis of human osteosarcoma cells. |
| Volume: |
35 |
| Issue: |
12 |
| Pages: |
11819-27 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Li CH |
| Year: |
2020 |
| Journal: |
Nature |
| Title: |
MeCP2 links heterochromatin condensates and neurodevelopmental disease. |
| Volume: |
586 |
| Issue: |
7829 |
| Pages: |
440-444 |
|
•
•
•
•
•
|
| Allele |
| Name: |
methyl CpG binding protein 2; targeted mutation 1.1, Zhaolan Zhou |
| Allele Type: |
Targeted |
| Attribute String: |
Humanized sequence |
|
•
•
•
•
•
|
| Allele |
| Name: |
methyl CpG binding protein 2; endonuclease-mediated mutation 3, Adrian Bird |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Conditional ready, Null/knockout, Reporter |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
GSE31850 |
| Experiment Type: |
transcription profiling by array |
| Study Type: |
WT vs. Mutant |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
GSE66870 |
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| Pathway |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wang YM |
| Year: |
2021 |
| Journal: |
Cell Death Dis |
| Title: |
MeCP2 duplication causes hyperandrogenism by upregulating LHCGR and downregulating RORα. |
| Volume: |
12 |
| Issue: |
11 |
| Pages: |
999 |
|
•
•
•
•
•
|
| Regulatory Region |
| Type: |
enhancer |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
SIRT1-mediated deacetylation of MeCP2 contributes to BDNF expression. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tillotson R |
| Year: |
2020 |
| Journal: |
bioRxiv |
| Title: |
Neuronal non-CG methylation is an essential target for MeCP2 function. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Han K |
| Year: |
2013 |
| Journal: |
Genes Dev |
| Title: |
Human-specific regulation of MeCP2 levels in fetal brains by microRNA miR-483-5p. |
| Volume: |
27 |
| Issue: |
5 |
| Pages: |
485-90 |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
GSE42895 |
| Experiment Type: |
transcription profiling by array |
| Study Type: |
WT vs. Mutant |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
transcription profiling by array |
| Study Type: |
WT vs. Mutant |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhang D |
| Year: |
2017 |
| Journal: |
Sci Rep |
| Title: |
Altered visual cortical processing in a mouse model of MECP2 duplication syndrome. |
| Volume: |
7 |
| Issue: |
1 |
| Pages: |
6468 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Agarwal N |
| Year: |
2007 |
| Journal: |
Nucleic Acids Res |
| Title: |
MeCP2 interacts with HP1 and modulates its heterochromatin association during myogenic differentiation. |
| Volume: |
35 |
| Issue: |
16 |
| Pages: |
5402-8 |
|
•
•
•
•
•
|
| DO Term |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jiang M |
| Year: |
2013 |
| Journal: |
J Neurosci |
| Title: |
Dendritic arborization and spine dynamics are abnormal in the mouse model of MECP2 duplication syndrome. |
| Volume: |
33 |
| Issue: |
50 |
| Pages: |
19518-33 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
501
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Allele |
| Name: |
transgene insertion 3, Huda Y Zoghbi |
| Allele Type: |
Transgenic |
| Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
Interaction between chromatin proteins MECP2 and ATRX is disrupted by mutations that cause inherited mental retardation. |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
Rett syndrome mutation MeCP2 T158A disrupts DNA binding, protein stability and ERP responses. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Fisher NM |
| Year: |
2018 |
| Journal: |
ACS Chem Neurosci |
| Title: |
Genetic Reduction or Negative Modulation of mGlu(7) Does Not Impact Anxiety and Fear Learning Phenotypes in a Mouse Model of MECP2 Duplication Syndrome. |
| Volume: |
9 |
| Issue: |
9 |
| Pages: |
2210-2217 |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
GSE72196 |
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
ATRX partners with cohesin and MeCP2 and contributes to developmental silencing of imprinted genes in the brain. |
|
•
•
•
•
•
|
| Allele |
| Name: |
microtubule-associated protein tau; targeted mutation 1, Rudolf Jaenisch |
| Allele Type: |
Targeted |
| Attribute String: |
Inserted expressed sequence, Null/knockout |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Tg(MECP2)3Hzo/? |
| Background: |
either: (FVB/N x 129S6/SvEvTac)F1 or (FVB/N x C57BL/6J)F1 |
| Zygosity: |
ot |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Mapt/Mapt |
| Background: |
B6.Cg-Mapt |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| DO Term |
|
•
•
•
•
•
|
| Allele |
| Name: |
methyl CpG binding protein 2; targeted mutation 2, Qiang Chang |
| Allele Type: |
Targeted |
| Attribute String: |
Epitope tag |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
GSE33457 |
| Experiment Type: |
transcription profiling by array |
| Study Type: |
WT vs. Mutant |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
GSE59029 |
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhou Z |
| Year: |
2006 |
| Journal: |
Neuron |
| Title: |
Brain-specific phosphorylation of MeCP2 regulates activity-dependent Bdnf transcription, dendritic growth, and spine maturation. |
| Volume: |
52 |
| Issue: |
2 |
| Pages: |
255-69 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wakefield RI |
| Year: |
1999 |
| Journal: |
J Mol Biol |
| Title: |
The solution structure of the domain from MeCP2 that binds to methylated DNA. |
| Volume: |
291 |
| Issue: |
5 |
| Pages: |
1055-65 |
|
•
•
•
•
•
|
| Allele |
| Name: |
transgene insertion 1, Huda Y Zoghbi |
| Allele Type: |
Transgenic |
| Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
GSE11150 |
| Experiment Type: |
transcription profiling by array |
| Study Type: |
WT vs. Mutant |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| Allele |
| Name: |
methyl CpG binding protein 2; targeted mutation 1, Qiang Chang |
| Allele Type: |
Targeted |
| Attribute String: |
Epitope tag, Modified isoform(s) |
|
•
•
•
•
•
|
| Allele |
| Name: |
regulatory region 295; endonuclease-mediated mutation 1, Huda Y Zoghbi |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Modified regulatory region |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
GSE43689 |
| Experiment Type: |
transcription profiling by array |
| Study Type: |
WT vs. Mutant |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
E-GEOD-66211 |
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| Allele |
| Name: |
transgene insertion A, Huda Y Zoghbi |
| Allele Type: |
Transgenic |
| Attribute String: |
Humanized sequence, Inserted expressed sequence, Reporter |
|
•
•
•
•
•
|
| Allele |
| Name: |
transgene insertion 1, Huda Y Zoghbi |
| Allele Type: |
Transgenic |
| Attribute String: |
Humanized sequence, Inserted expressed sequence, Reporter |
|
•
•
•
•
•
|
| Allele |
| Name: |
methyl CpG binding protein 2; targeted mutation 1, Antonio Bedalov |
| Allele Type: |
Targeted |
| Attribute String: |
Null/knockout, Reporter |
|
•
•
•
•
•
|
| Allele |
| Name: |
regulatory region 296; endonuclease-mediated mutation 1, Huda Y Zoghbi |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Modified regulatory region |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Methyl-CpG-binding protein 2 (Mecp2) binds specifically to methylated DNA and represses transcription through the recruitment of chromatin remodeling complexes containing histone deacetylase activities [, ]. It is a multi-functional protein whose function depends on its protein partners and post-translational modifications []. Mecp2 is required for proper mitotic spindle organisation []and affects proliferation and apoptosis []. Mutations in MeCP2 gene cause an X-linked neurodevelopmental disease known as Rett syndrome [].Methyl-CpG-binding domain protein 4 (MBD4) is a mismatch-specific DNA N-glycosylase involved in DNA repair. It has thymine glycosylase activity and is specific for G:T mismatches within methylated and unmethylated CpG sites [, ]. |
|
•
•
•
•
•
|
| Transgene |
| Type: |
transgene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Transgene |
| Type: |
transgene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Tg(MECP2)1Hzo/? |
| Background: |
either: (FVB/N x 129S6/SvEvTac)F1 or (FVB/N x C57BL/6J)F1 |
| Zygosity: |
ot |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Tg(MECP2)1Hzo/? |
| Background: |
FVB-Tg(MECP2)1Hzo/J |
| Zygosity: |
ot |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
GSE11596 |
| Experiment Type: |
transcription profiling by array |
| Study Type: |
WT vs. Mutant |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
GSE42987 |
| Experiment Type: |
transcription profiling by array |
| Study Type: |
WT vs. Mutant |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, mutant strain, transgenic |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, mutant strain, transgenic |
|
•
•
•
•
•
|
| Allele |
| Name: |
methyl CpG binding protein 2; targeted mutation 1, Cyagen Biosciences |
| Allele Type: |
Targeted |
| Attribute String: |
Inserted expressed sequence, Null/knockout |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Tg(MECP2*R270X/GFP)AHzo/? |
| Background: |
involves: 129P2/OlaHsd * FVB |
| Zygosity: |
ot |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Rr295/Rr295 |
| Background: |
involves: C57BL/6J |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Rr296/Rr296 |
| Background: |
Not Specified |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhou C |
| Year: |
2019 |
| Journal: |
Front Neurosci |
| Title: |
Atypical Response Properties of the Auditory Cortex of Awake MECP2-Overexpressing Mice. |
| Volume: |
13 |
|
| Pages: |
439 |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1196
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
108
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
175
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Petronzelli F |
| Year: |
2000 |
| Journal: |
J Biol Chem |
| Title: |
Biphasic kinetics of the human DNA repair protein MED1 (MBD4), a mismatch-specific DNA N-glycosylase. |
| Volume: |
275 |
| Issue: |
42 |
| Pages: |
32422-9 |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
transgenic, coisogenic |
|
•
•
•
•
•
|
| Allele |
| Name: |
transgene insertion A, Huda Y Zoghbi |
| Allele Type: |
Transgenic |
| Attribute String: |
Humanized sequence, Inserted expressed sequence, Reporter |
|
•
•
•
•
•
|
| Allele |
| Name: |
transgene insertion 1, Huda Y Zoghbi |
| Allele Type: |
Transgenic |
| Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
| Allele |
| Name: |
transgene insertion 1, Huda Y Zoghbi |
| Allele Type: |
Transgenic |
| Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
| Allele |
| Name: |
methyl CpG binding protein 2; targeted mutation 5.1, Zhaolan Zhou |
| Allele Type: |
Targeted |
| Attribute String: |
Epitope tag, No functional change |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, targeted mutation, mutant strain |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Tg(MECP2)3Hzo/? |
| Background: |
involves: FVB |
| Zygosity: |
ot |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
626
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
1274
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yang T |
| Year: |
2012 |
| Journal: |
Sci Transl Med |
| Title: |
Overexpression of methyl-CpG binding protein 2 impairs T(H)1 responses. |
| Volume: |
4 |
| Issue: |
163 |
| Pages: |
163ra158 |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
| Series Id: |
GSE24320 |
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
ArrayExpress |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
488
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Allele |
| Name: |
methyl CpG binding protein 2; targeted mutation 1.1, Adrian Bird |
| Allele Type: |
Targeted |
| Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
targeted mutation, mutant strain, congenic |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
transgenic, mutant strain, coisogenic |
|
•
•
•
•
•
|
| Allele |
| Name: |
methyl CpG binding protein 2; targeted mutation 1.1, Joseph T Coyle |
| Allele Type: |
Targeted |
| Attribute String: |
Humanized sequence |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
transgenic, mutant strain, coisogenic |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, mutant strain, transgenic |
|
•
•
•
•
•
|
| Allele |
| Name: |
methyl CpG binding protein 2; targeted mutation 3.1, Zhaolan Zhou |
| Allele Type: |
Targeted |
| Attribute String: |
Epitope tag, Humanized sequence |
|
•
•
•
•
•
|
| Allele |
| Name: |
methyl CpG binding protein 2; targeted mutation 4.1, Zhaolan Zhou |
| Allele Type: |
Targeted |
| Attribute String: |
Epitope tag, Humanized sequence |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
| Allele |
| Name: |
methyl CpG binding protein 2; endonuclease-mediated mutation 7.1, Adrian Bird |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Reporter |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Mapt/Mapt |
| Background: |
involves: 129/Sv * C57BL/6 |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Mapt/Mapt<+> |
| Background: |
involves: 129/Sv * C57BL/6 |
| Zygosity: |
ht |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Tg(MECP2*G273X/GFP)AHzo/? |
| Background: |
involves: 129P2/OlaHsd * FVB |
| Zygosity: |
ot |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|