Type |
Details |
Score |
Publication |
First Author: |
Ueno M |
Year: |
2013 |
Journal: |
Nat Neurosci |
Title: |
Layer V cortical neurons require microglial support for survival during postnatal development. |
Volume: |
16 |
Issue: |
5 |
Pages: |
543-51 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ross JA |
Year: |
2023 |
Journal: |
Cardiovasc Res |
Title: |
Lem2 is essential for cardiac development by maintaining nuclear integrity. |
Volume: |
119 |
Issue: |
11 |
Pages: |
2074-2088 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pujadas G |
Year: |
2016 |
Journal: |
Sci Rep |
Title: |
Wnt9a deficiency discloses a repressive role of Tcf7l2 on endocrine differentiation in the embryonic pancreas. |
Volume: |
6 |
|
Pages: |
19223 |
|
•
•
•
•
•
|
Publication |
First Author: |
Abou Nader N |
Year: |
2024 |
Journal: |
FASEB J |
Title: |
Lats1 and Lats2 regulate YAP and TAZ activity to control the development of mouse Sertoli cells. |
Volume: |
38 |
Issue: |
9 |
Pages: |
e23633 |
|
•
•
•
•
•
|
Publication |
First Author: |
Abou Nader N |
Year: |
2022 |
Journal: |
Int J Mol Sci |
Title: |
Targeted Disruption of Lats1 and Lats2 in Mice Impairs Testis Development and Alters Somatic Cell Fate. |
Volume: |
23 |
Issue: |
21 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Jiang D |
Year: |
2020 |
Journal: |
J Comp Neurol |
Title: |
Spatiotemporal gene expression patterns reveal molecular relatedness between retinal laminae. |
Volume: |
528 |
Issue: |
5 |
Pages: |
729-755 |
|
•
•
•
•
•
|
Publication |
First Author: |
Saeed H |
Year: |
2011 |
Journal: |
J Bone Miner Res |
Title: |
Telomerase-deficient mice exhibit bone loss owing to defects in osteoblasts and increased osteoclastogenesis by inflammatory microenvironment. |
Volume: |
26 |
Issue: |
7 |
Pages: |
1494-505 |
|
•
•
•
•
•
|
Publication |
First Author: |
Seth A |
Year: |
2014 |
Journal: |
Development |
Title: |
Prox1 ablation in hepatic progenitors causes defective hepatocyte specification and increases biliary cell commitment. |
Volume: |
141 |
Issue: |
3 |
Pages: |
538-47 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rousso DL |
Year: |
2016 |
Journal: |
Cell Rep |
Title: |
Two Pairs of ON and OFF Retinal Ganglion Cells Are Defined by Intersectional Patterns of Transcription Factor Expression. |
Volume: |
15 |
Issue: |
9 |
Pages: |
1930-44 |
|
•
•
•
•
•
|
Publication |
First Author: |
Brommage R |
Year: |
2014 |
Journal: |
Bone Res |
Title: |
High-throughput screening of mouse gene knockouts identifies established and novel skeletal phenotypes. |
Volume: |
2 |
|
Pages: |
14034 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kiyama T |
Year: |
2018 |
Journal: |
Mol Neurodegener |
Title: |
Essential roles of mitochondrial biogenesis regulator Nrf1 in retinal development and homeostasis. |
Volume: |
13 |
Issue: |
1 |
Pages: |
56 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wilkerson BA |
Year: |
2021 |
Journal: |
Elife |
Title: |
Novel cell types and developmental lineages revealed by single-cell RNA-seq analysis of the mouse crista ampullaris. |
Volume: |
10 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Tkatchenko TV |
Year: |
2009 |
Journal: |
Physiol Genomics |
Title: |
Lack of periostin leads to suppression of Notch1 signaling and calcific aortic valve disease. |
Volume: |
39 |
Issue: |
3 |
Pages: |
160-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gu G |
Year: |
2004 |
Journal: |
Development |
Title: |
Global expression analysis of gene regulatory pathways during endocrine pancreatic development. |
Volume: |
131 |
Issue: |
1 |
Pages: |
165-79 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen A |
Year: |
2022 |
Journal: |
Cell |
Title: |
Spatiotemporal transcriptomic atlas of mouse organogenesis using DNA nanoball-patterned arrays. |
Volume: |
185 |
Issue: |
10 |
Pages: |
1777-1792.e21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Manabe R |
Year: |
2008 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Transcriptome-based systematic identification of extracellular matrix proteins. |
Volume: |
105 |
Issue: |
35 |
Pages: |
12849-54 |
|
•
•
•
•
•
|
Publication |
First Author: |
Takenaka M |
Year: |
1998 |
Journal: |
Kidney Int |
Title: |
Isolation of genes identified in mouse renal proximal tubule by comparing different gene expression profiles. |
Volume: |
53 |
Issue: |
3 |
Pages: |
562-72 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hecht J |
Year: |
2007 |
Journal: |
Gene Expr Patterns |
Title: |
Detection of novel skeletogenesis target genes by comprehensive analysis of a Runx2(-/-) mouse model. |
Volume: |
7 |
Issue: |
1-2 |
Pages: |
102-12 |
|
•
•
•
•
•
|
Publication |
First Author: |
Minina E |
Year: |
2005 |
Journal: |
Gene Expr Patterns |
Title: |
Expression of Fgf and Tgfbeta signaling related genes during embryonic endochondral ossification. |
Volume: |
6 |
Issue: |
1 |
Pages: |
102-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hu B |
Year: |
2012 |
Journal: |
Cell |
Title: |
Multifocal epithelial tumors and field cancerization from loss of mesenchymal CSL signaling. |
Volume: |
149 |
Issue: |
6 |
Pages: |
1207-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tarantino C |
Year: |
2010 |
Journal: |
FASEB J |
Title: |
miRNA 34a, 100, and 137 modulate differentiation of mouse embryonic stem cells. |
Volume: |
24 |
Issue: |
9 |
Pages: |
3255-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shanghai Model Organisms Center |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hoffman BG |
Year: |
2008 |
Journal: |
Genome Biol |
Title: |
Identification of transcripts with enriched expression in the developing and adult pancreas. |
Volume: |
9 |
Issue: |
6 |
Pages: |
R99 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tang F |
Year: |
2011 |
Journal: |
PLoS One |
Title: |
Deterministic and stochastic allele specific gene expression in single mouse blastomeres. |
Volume: |
6 |
Issue: |
6 |
Pages: |
e21208 |
|
•
•
•
•
•
|
Publication |
First Author: |
International Committee on Standardized Genetic Nomenclature for Mice |
Year: |
1993 |
|
Title: |
Nomenclature rule change to delete hyphens and parentheses from mouse locus symbols |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hansen J |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
Volume: |
100 |
Issue: |
17 |
Pages: |
9918-22 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2016 |
|
Title: |
Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
|
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Thompson CL |
Year: |
2014 |
Journal: |
Neuron |
Title: |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
Volume: |
83 |
Issue: |
2 |
Pages: |
309-323 |
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•
•
•
•
•
|
Publication |
First Author: |
Koscielny G |
Year: |
2014 |
Journal: |
Nucleic Acids Res |
Title: |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
Volume: |
42 |
Issue: |
Database issue |
Pages: |
D802-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
International Knockout Mouse Consortium |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of modified allele data from IKMC and creation of new knockout alleles |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Lennon G |
Year: |
1999 |
Journal: |
Database Download |
Title: |
WashU-HHMI Mouse EST Project |
|
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Velocigene |
Year: |
2008 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
International Mouse Strain Resource |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
|
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|
•
•
•
•
•
|
Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
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|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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|
•
•
•
•
•
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Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
MGI Sequence Curation Reference |
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|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
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•
•
•
•
•
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Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
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•
•
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•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
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|
•
•
•
•
•
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Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
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•
•
•
•
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Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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•
•
•
•
•
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Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
2022 |
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Title: |
Cyagen Biosciences Website. |
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•
•
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•
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Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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•
•
•
•
•
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Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
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•
•
•
•
•
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Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
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•
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Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
•
•
•
•
|
Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
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|
•
•
•
•
•
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
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•
•
•
•
•
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
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|
•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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•
•
•
•
•
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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|
|
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
430
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Brina D |
Year: |
2023 |
Journal: |
Nat Cancer |
Title: |
The Akt/mTOR and MNK/eIF4E pathways rewire the prostate cancer translatome to secrete HGF, SPP1 and BGN and recruit suppressive myeloid cells. |
Volume: |
4 |
Issue: |
8 |
Pages: |
1102-1121 |
|
•
•
•
•
•
|
Publication |
First Author: |
Plisson C |
Year: |
2007 |
Journal: |
EMBO J |
Title: |
Structure of bacteriophage SPP1 tail reveals trigger for DNA ejection. |
Volume: |
26 |
Issue: |
15 |
Pages: |
3720-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Oliveira L |
Year: |
2013 |
Journal: |
Virus Res |
Title: |
Headful DNA packaging: bacteriophage SPP1 as a model system. |
Volume: |
173 |
Issue: |
2 |
Pages: |
247-59 |
|
•
•
•
•
•
|
Publication |
First Author: |
Poh SL |
Year: |
2008 |
Journal: |
J Mol Biol |
Title: |
Oligomerization of the SPP1 scaffolding protein. |
Volume: |
378 |
Issue: |
3 |
Pages: |
551-64 |
|
•
•
•
•
•
|
Publication |
First Author: |
Vinga I |
Year: |
2006 |
Journal: |
Mol Microbiol |
Title: |
The minor capsid protein gp7 of bacteriophage SPP1 is required for efficient infection of Bacillus subtilis. |
Volume: |
61 |
Issue: |
6 |
Pages: |
1609-21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Camacho AG |
Year: |
2003 |
Journal: |
J Biol Chem |
Title: |
Bacillus subtilis bacteriophage SPP1 DNA packaging motor requires terminase and portal proteins. |
Volume: |
278 |
Issue: |
26 |
Pages: |
23251-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Veesler D |
Year: |
2010 |
Journal: |
J Biol Chem |
Title: |
Crystal structure of bacteriophage SPP1 distal tail protein (gp19.1): a baseplate hub paradigm in gram-positive infecting phages. |
Volume: |
285 |
Issue: |
47 |
Pages: |
36666-73 |
|
•
•
•
•
•
|
MP Term |
|
•
•
•
•
•
|
MP Term |
|
•
•
•
•
•
|
MP Term |
|
•
•
•
•
•
|
Publication |
First Author: |
Lhuillier S |
Year: |
2009 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Structure of bacteriophage SPP1 head-to-tail connection reveals mechanism for viral DNA gating. |
Volume: |
106 |
Issue: |
21 |
Pages: |
8507-12 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
JakutytÄ— L |
Year: |
2011 |
Journal: |
J Bacteriol |
Title: |
Bacteriophage infection in rod-shaped gram-positive bacteria: evidence for a preferential polar route for phage SPP1 entry in Bacillus subtilis. |
Volume: |
193 |
Issue: |
18 |
Pages: |
4893-903 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chai S |
Year: |
1992 |
Journal: |
J Mol Biol |
Title: |
Molecular analysis of the Bacillus subtilis bacteriophage SPP1 region encompassing genes 1 to 6. The products of gene 1 and gene 2 are required for pac cleavage. |
Volume: |
224 |
Issue: |
1 |
Pages: |
87-102 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5447969 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2020-03-05 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1729328 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6393312 |
Age: |
postnatal day 70 |
Image: |
5C |
Note: |
There was no overlap of Spp1 expression with the Type II hair cell marker, Calb2. |
Specimen Label: |
5C |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
Publication |
First Author: |
White HE |
Year: |
2012 |
Journal: |
J Virol |
Title: |
Capsid structure and its stability at the late stages of bacteriophage SPP1 assembly. |
Volume: |
86 |
Issue: |
12 |
Pages: |
6768-77 |
|
•
•
•
•
•
|
Publication |
First Author: |
Vellani TS |
Year: |
2003 |
Journal: |
J Bacteriol |
Title: |
Bacteriophage SPP1 Chu is an alkaline exonuclease in the SynExo family of viral two-component recombinases. |
Volume: |
185 |
Issue: |
8 |
Pages: |
2465-74 |
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Publication |
First Author: |
Bailey S |
Year: |
2003 |
Journal: |
J Biol Chem |
Title: |
Structural analysis of Bacillus subtilis SPP1 phage helicase loader protein G39P. |
Volume: |
278 |
Issue: |
17 |
Pages: |
15304-12 |
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Allele |
Name: |
secreted phosphoprotein 1; endonuclease-mediated mutation 3, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
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Strain |
Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
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Publication |
First Author: |
Chagot B |
Year: |
2012 |
Journal: |
Proteins |
Title: |
Solution structure of gp17 from the Siphoviridae bacteriophage SPP1: insights into its role in virion assembly. |
Volume: |
80 |
Issue: |
1 |
Pages: |
319-26 |
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Publication |
First Author: |
Auzat I |
Year: |
2014 |
Journal: |
Mol Microbiol |
Title: |
A touch of glue to complete bacteriophage assembly: the tail-to-head joining protein (THJP) family. |
Volume: |
91 |
Issue: |
6 |
Pages: |
1164-78 |
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Protein Domain |
Type: |
Family |
Description: |
Gp17 from Siphoviridae bacteriophage SPP1 is a tail completion protein located at the interface between the connector protein gp16 and the tail of bacteriophage SPP1 []. Gp17 plays a fundamental role in the head-to-tail joining reaction, the ultimate step of virus particle assembly []. |
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Publication |
First Author: |
Lebedev AA |
Year: |
2007 |
Journal: |
EMBO J |
Title: |
Structural framework for DNA translocation via the viral portal protein. |
Volume: |
26 |
Issue: |
7 |
Pages: |
1984-94 |
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Protein Domain |
Type: |
Family |
Description: |
The bacteriophage portal protein forms a gateway, or portal, enabling DNA passage during packaging and ejection of the phage genome. It also forms the junction between the phage head (capsid) and the tail proteins []. During SPP1 morphogenesis, Gp6 participates in the procapsid assembly reaction [, ].In the mature SPP1 virion, the portal protein, GP6, exists as a dodecamer, whereas recombinant SPP1 Gp6 has been shown to form 13-subunit assemblies [, ].This entry includes Bacillus phage SPP1-type portal proteins, Mycobacterium phage portal proteins and putative portal proteins of the Listeria phage A118-type. |
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Protein Domain |
Type: |
Family |
Description: |
This protein, also known as Gp17, protects the P22 phage from the superinfection exclusion system of other prophages, such as fels-2 [].Gp17 found in other bacteriophages such as SPP1 (siphophage SPP1, a lytic Bacillus subtilis phage) has been identified as a tail completion protein adopting an alpha/beta fold, and found to be located at the interface between the head-to-tail connector and the tail of bacteriophage SPP1 []. |
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Allele |
Name: |
secreted phosphoprotein 1; targeted mutation 1, Brigid L Hogan |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout |
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Allele |
Name: |
transgene insertion PD43, GENSAT Project at Rockefeller University |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
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Allele |
Name: |
secreted phosphoprotein 1; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Conditional ready, No functional change |
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Allele |
Name: |
secreted phosphoprotein 1; endonuclease-mediated mutation 2, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Conditional ready, No functional change |
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Allele |
Name: |
secreted phosphoprotein 1; targeted mutation 1.1, Joshua R Sanes |
Allele Type: |
Targeted |
Attribute String: |
Inducible, Null/knockout, Recombinase |
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Publication |
First Author: |
Lurz R |
Year: |
2001 |
Journal: |
J Mol Biol |
Title: |
Structural organisation of the head-to-tail interface of a bacterial virus. |
Volume: |
310 |
Issue: |
5 |
Pages: |
1027-37 |
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Protein Domain |
Type: |
Domain |
Description: |
This entry represents the N-terminal domain of Distal tail protein (Dit) from Bacillus phage SPP1 (Bacteriophage SPP1) and similar proteins found in bacteriophages and temperate phage of mainly from Firmicutes. This domain is approximately 125 amino acids long.Dit Forms a 40 Angstroms wide channel at the distal tip of the tail. It remains associated to the tail after DNA ejection []. |
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Protein Domain |
Type: |
Family |
Description: |
The portal protein is a bacteriophage component that forms a hole, or portal, enabling DNA passage during packaging and ejection. It also forms the junction between the phage head (capsid) and the tail proteins [].This entry represents one particular subfamily of portal proteins consisting of the Bacillus phage SPP1 protein and similar sequences. |
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Protein Domain |
Type: |
Domain |
Description: |
Initiation of packaging of double-stranded viral DNA involves the specific interaction of the prohead with viral DNA in a process mediated by a phage-encoded terminase protein. The terminase enzymes are usually hetero-oligomers composed of a small and a large subunit [, ]. This entry represents the C-terminal domain of the large subunit.Proteins containing this domain include gp2 from Bacillus phage SPP1 [, ]. |
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Protein Domain |
Type: |
Family |
Description: |
This family consists of several Siphovirus and other phage tail component proteins, including bacteriophage SPP1 distal tail protein Dit (also known as Gp19.1 or Gp19) [], as well as some bacterial proteins of unknown function. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. |
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HT Experiment |
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Experiment Type: |
RNA-Seq |
Study Type: |
Baseline |
Source: |
GEO |
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