| Type |
Details |
Score |
| Protein Domain |
| Type: |
Family |
| Description: |
A number of protein families resemble HPr kinase (see ) but do not belong to that system. They include this family, which appears instead to be the marker for a different type of gene neighbourhood, in which one of the conserved neighbouring proteins resembles (but is distinct from) PqqD. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
2-amino-3-ketobutyrate coenzyme A ligase (KBL), also called glycine C-acetyltransferase, is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA, the second step in the conversion of L-threonine to glycine in both prokaryotes and eukaryotes [, ]. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
This entry represents a group of acyl-CoA dehydrogenases from bacteria and plants, including acyl-coenzyme A oxidase 4 (ACX4) from Arabidopsis. ACX4 catalyses the desaturation of short-chain acyl-CoAs to 2-trans-enoyl-CoAs in plant peroxisomes [, ]. It is essential for embryo development []and is required for nuclear histone acetylation and DNA demethylation at some endogenous genomic loci []. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Xu B |
| Year: |
2011 |
| Journal: |
Development |
| Title: |
Smad1 and its target gene Wif1 coordinate BMP and Wnt signaling activities to regulate fetal lung development. |
| Volume: |
138 |
| Issue: |
5 |
| Pages: |
925-35 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ravindran R |
| Year: |
2007 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
CCR6-dependent recruitment of blood phagocytes is necessary for rapid CD4 T cell responses to local bacterial infection. |
| Volume: |
104 |
| Issue: |
29 |
| Pages: |
12075-80 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nakatsu Y |
| Year: |
2017 |
| Journal: |
J Biol Chem |
| Title: |
The prolyl isomerase Pin1 increases β-cell proliferation and enhances insulin secretion. |
| Volume: |
292 |
| Issue: |
28 |
| Pages: |
11886-11895 |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
Baseline |
| Source: |
GEO |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Durdik J |
| Year: |
1989 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Isotype switching by a microinjected mu immunoglobulin heavy chain gene in transgenic mice. |
| Volume: |
86 |
| Issue: |
7 |
| Pages: |
2346-50 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jain R |
| Year: |
2017 |
| Journal: |
Blood |
| Title: |
A critical epithelial survival axis regulated by MCL-1 maintains thymic function in mice. |
| Volume: |
130 |
| Issue: |
23 |
| Pages: |
2504-2515 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yao L |
| Year: |
2017 |
| Journal: |
Am J Physiol Regul Integr Comp Physiol |
| Title: |
Obesity-induced vascular inflammation involves elevated arginase activity. |
| Volume: |
313 |
| Issue: |
5 |
| Pages: |
R560-R571 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Newhall KJ |
| Year: |
2005 |
| Journal: |
Mol Endocrinol |
| Title: |
Deletion of the RIIbeta-subunit of protein kinase A decreases body weight and increases energy expenditure in the obese, leptin-deficient ob/ob mouse. |
| Volume: |
19 |
| Issue: |
4 |
| Pages: |
982-91 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kawamori D |
| Year: |
2017 |
| Journal: |
Diabetologia |
| Title: |
GLP-1 signalling compensates for impaired insulin signalling in regulating beta cell proliferation in βIRKO mice. |
| Volume: |
60 |
| Issue: |
8 |
| Pages: |
1442-1453 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Silveira PA |
| Year: |
2001 |
| Journal: |
Immunogenetics |
| Title: |
Identification of the Gasa3 and Gasa4 autoimmune gastritis susceptibility genes using congenic mice and partitioned, segregative and interaction analyses. |
| Volume: |
53 |
| Issue: |
9 |
| Pages: |
741-50 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mishra A |
| Year: |
2008 |
| Journal: |
J Biol Chem |
| Title: |
E6-AP promotes misfolded polyglutamine proteins for proteasomal degradation and suppresses polyglutamine protein aggregation and toxicity. |
| Volume: |
283 |
| Issue: |
12 |
| Pages: |
7648-56 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kirov A |
| Year: |
2012 |
| Journal: |
PLoS One |
| Title: |
Transgenic expression of nonclassically secreted FGF suppresses kidney repair. |
| Volume: |
7 |
| Issue: |
5 |
| Pages: |
e36485 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Qatanani M |
| Year: |
2009 |
| Journal: |
J Clin Invest |
| Title: |
Macrophage-derived human resistin exacerbates adipose tissue inflammation and insulin resistance in mice. |
| Volume: |
119 |
| Issue: |
3 |
| Pages: |
531-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lutz J |
| Year: |
2011 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Pro-B cells sense productive immunoglobulin heavy chain rearrangement irrespective of polypeptide production. |
| Volume: |
108 |
| Issue: |
26 |
| Pages: |
10644-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yamaguchi R |
| Year: |
2009 |
| Journal: |
Biol Reprod |
| Title: |
Disruption of ADAM3 impairs the migration of sperm into oviduct in mouse. |
| Volume: |
81 |
| Issue: |
1 |
| Pages: |
142-6 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chattopadhyay A |
| Year: |
2016 |
| Journal: |
J Lipid Res |
| Title: |
Tg6F ameliorates the increase in oxidized phospholipids in the jejunum of mice fed unsaturated LysoPC or WD. |
| Volume: |
57 |
| Issue: |
5 |
| Pages: |
832-47 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Prevost G |
| Year: |
2013 |
| Journal: |
Endocrinology |
| Title: |
The PACAP-regulated gene selenoprotein T is abundantly expressed in mouse and human β-cells and its targeted inactivation impairs glucose tolerance. |
| Volume: |
154 |
| Issue: |
10 |
| Pages: |
3796-806 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
441
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Miyazaki M |
| Year: |
2002 |
| Journal: |
J Lipid Res |
| Title: |
Lack of stearoyl-CoA desaturase-1 function induces a palmitoyl-CoA Delta6 desaturase and represses the stearoyl-CoA desaturase-3 gene in the preputial glands of the mouse. |
| Volume: |
43 |
| Issue: |
12 |
| Pages: |
2146-54 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Salikhova A |
| Year: |
2008 |
| Journal: |
Circ Res |
| Title: |
Vascular endothelial growth factor and semaphorin induce neuropilin-1 endocytosis via separate pathways. |
| Volume: |
103 |
| Issue: |
6 |
| Pages: |
e71-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Somasundaram A |
| Year: |
2014 |
| Journal: |
J Neurosci |
| Title: |
Store-operated CRAC channels regulate gene expression and proliferation in neural progenitor cells. |
| Volume: |
34 |
| Issue: |
27 |
| Pages: |
9107-23 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Held K |
| Year: |
2015 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Activation of TRPM3 by a potent synthetic ligand reveals a role in peptide release. |
| Volume: |
112 |
| Issue: |
11 |
| Pages: |
E1363-72 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Quintana A |
| Year: |
2013 |
| Journal: |
Brain Behav Immun |
| Title: |
Astrocyte-specific deficiency of interleukin-6 and its receptor reveal specific roles in survival, body weight and behavior. |
| Volume: |
27 |
| Issue: |
1 |
| Pages: |
162-73 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hygge-Blakeman K |
| Year: |
2004 |
| Journal: |
Brain Res |
| Title: |
Galanin over-expression decreases the development of neuropathic pain-like behaviors in mice after partial sciatic nerve injury. |
| Volume: |
1025 |
| Issue: |
1-2 |
| Pages: |
152-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
He B |
| Year: |
2005 |
| Journal: |
Neuroscience |
| Title: |
Ectopic galanin expression and normal galanin receptor 2 and galanin receptor 3 mRNA levels in the forebrain of galanin transgenic mice. |
| Volume: |
133 |
| Issue: |
2 |
| Pages: |
371-80 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Karatayev O |
| Year: |
2009 |
| Journal: |
Alcohol |
| Title: |
Increased intake of ethanol and dietary fat in galanin overexpressing mice. |
| Volume: |
43 |
| Issue: |
8 |
| Pages: |
571-80 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Laplante F |
| Year: |
2004 |
| Journal: |
Regul Pept |
| Title: |
Selective reduction in ventral hippocampal acetylcholine release in awake galanin-treated rats and galanin-overexpressing transgenic mice. |
| Volume: |
122 |
| Issue: |
2 |
| Pages: |
91-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Curdt N |
| Year: |
2022 |
| Journal: |
Sci Rep |
| Title: |
Search strategy analysis of Tg4-42 Alzheimer Mice in the Morris Water Maze reveals early spatial navigation deficits. |
| Volume: |
12 |
| Issue: |
1 |
| Pages: |
5451 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bouter C |
| Year: |
2018 |
| Journal: |
Front Aging Neurosci |
| Title: |
18F-FDG-PET Detects Drastic Changes in Brain Metabolism in the Tg4-42 Model of Alzheimer's Disease. |
| Volume: |
10 |
|
| Pages: |
425 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bohórquez DV |
| Year: |
2011 |
| Journal: |
J Mol Histol |
| Title: |
Characterization of basal pseudopod-like processes in ileal and colonic PYY cells. |
| Volume: |
42 |
| Issue: |
1 |
| Pages: |
3-13 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
La Sala MS |
| Year: |
2013 |
| Journal: |
FASEB J |
| Title: |
Modulation of taste responsiveness by the satiation hormone peptide YY. |
| Volume: |
27 |
| Issue: |
12 |
| Pages: |
5022-33 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wrenn CC |
| Year: |
2006 |
| Journal: |
Pharmacol Biochem Behav |
| Title: |
Performance of galanin transgenic mice in the 5-choice serial reaction time attentional task. |
| Volume: |
83 |
| Issue: |
3 |
| Pages: |
428-40 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Noma A |
| Year: |
2009 |
| Journal: |
Nucleic Acids Res |
| Title: |
Mechanistic characterization of the sulfur-relay system for eukaryotic 2-thiouridine biogenesis at tRNA wobble positions. |
| Volume: |
37 |
| Issue: |
4 |
| Pages: |
1335-52 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Rahman A |
| Year: |
2001 |
| Journal: |
J Bacteriol |
| Title: |
Identification of the structural gene for the TDP-Fuc4NAc:lipid II Fuc4NAc transferase involved in synthesis of enterobacterial common antigen in Escherichia coli K-12. |
| Volume: |
183 |
| Issue: |
22 |
| Pages: |
6509-16 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chernyshev A |
| Year: |
2007 |
| Journal: |
Appl Microbiol Biotechnol |
| Title: |
Thymidyl biosynthesis enzymes as antibiotic targets. |
| Volume: |
74 |
| Issue: |
2 |
| Pages: |
282-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nakata A |
| Year: |
1984 |
| Journal: |
J Bacteriol |
| Title: |
Regulation of the phosphate regulon in Escherichia coli K-12: regulation of the negative regulatory gene phoU and identification of the gene product. |
| Volume: |
159 |
| Issue: |
3 |
| Pages: |
979-85 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Abbasi A |
| Year: |
2015 |
| Journal: |
Front Mol Neurosci |
| Title: |
The role of the ubiquitin-editing enzyme A20 in diseases of the central nervous system and other pathological processes. |
| Volume: |
8 |
|
| Pages: |
21 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Faik A |
| Year: |
2006 |
| Journal: |
Mol Genet Genomics |
| Title: |
Putative fasciclin-like arabinogalactan-proteins (FLA) in wheat (Triticum aestivum) and rice (Oryza sativa): identification and bioinformatic analyses. |
| Volume: |
276 |
| Issue: |
5 |
| Pages: |
478-94 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Guranowski A |
| Year: |
1983 |
| Journal: |
J Biol Chem |
| Title: |
Catabolism of diadenosine 5',5"'-P1,P4-tetraphosphate in procaryotes. Purification and properties of diadenosine 5',5"'-P1,P4-tetraphosphate (symmetrical) pyrophosphohydrolase from Escherichia coli K12. |
| Volume: |
258 |
| Issue: |
24 |
| Pages: |
14784-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nourani A |
| Year: |
2006 |
| Journal: |
Mol Cell Biol |
| Title: |
Evidence that Spt2/Sin1, an HMG-like factor, plays roles in transcription elongation, chromatin structure, and genome stability in Saccharomyces cerevisiae. |
| Volume: |
26 |
| Issue: |
4 |
| Pages: |
1496-509 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Belkhiri A |
| Year: |
2016 |
| Journal: |
Oncotarget |
| Title: |
DARPP-32: from neurotransmission to cancer. |
| Volume: |
7 |
| Issue: |
14 |
| Pages: |
17631-40 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Errico A |
| Year: |
2002 |
| Journal: |
Hum Mol Genet |
| Title: |
Spastin, the protein mutated in autosomal dominant hereditary spastic paraplegia, is involved in microtubule dynamics. |
| Volume: |
11 |
| Issue: |
2 |
| Pages: |
153-63 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kikuchi A |
| Year: |
1999 |
| Journal: |
J Biol Chem |
| Title: |
Evidence for covalent attachment of diphytanylglyceryl phosphate to the cell-surface glycoprotein of Halobacterium halobium. |
| Volume: |
274 |
| Issue: |
25 |
| Pages: |
18011-6 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Loriot A |
| Year: |
2003 |
| Journal: |
Int J Cancer |
| Title: |
Five new human cancer-germline genes identified among 12 genes expressed in spermatogonia. |
| Volume: |
105 |
| Issue: |
3 |
| Pages: |
371-6 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Eulalio A |
| Year: |
2008 |
| Journal: |
Nat Struct Mol Biol |
| Title: |
GW182 interaction with Argonaute is essential for miRNA-mediated translational repression and mRNA decay. |
| Volume: |
15 |
| Issue: |
4 |
| Pages: |
346-53 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Perez A |
| Year: |
2000 |
| Journal: |
Biochim Biophys Acta |
| Title: |
Characterization of the 5'-flanking region of the gene encoding the 50 kDa subunit of human DNA polymerase delta. |
| Volume: |
1493 |
| Issue: |
1-2 |
| Pages: |
231-6 |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Louet JF |
| Year: |
2006 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Oncogenic steroid receptor coactivator-3 is a key regulator of the white adipogenic program. |
| Volume: |
103 |
| Issue: |
47 |
| Pages: |
17868-73 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Vecellio Reane D |
| Year: |
2022 |
| Journal: |
Int J Mol Sci |
| Title: |
The Splicing of the Mitochondrial Calcium Uniporter Genuine Activator MICU1 Is Driven by RBFOX2 Splicing Factor during Myogenic Differentiation. |
| Volume: |
23 |
| Issue: |
5 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ridderstad A |
| Year: |
1996 |
| Journal: |
J Immunol |
| Title: |
The xid mutation diminishes memory B cell generation but does not affect somatic hypermutation and selection. |
| Volume: |
157 |
| Issue: |
8 |
| Pages: |
3357-65 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mañas-Ojeda A |
| Year: |
2024 |
| Journal: |
Mol Psychiatry |
| Title: |
Activation of somatostatin neurons in the medial amygdala reverses long-term aggression and social deficits associated to early-life stress in male mice. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Liu Y |
| Year: |
1997 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Mouse model of GM2 activator deficiency manifests cerebellar pathology and motor impairment. |
| Volume: |
94 |
| Issue: |
15 |
| Pages: |
8138-43 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Butz S |
| Year: |
1998 |
| Journal: |
Cell |
| Title: |
A tripartite protein complex with the potential to couple synaptic vesicle exocytosis to cell adhesion in brain. |
| Volume: |
94 |
| Issue: |
6 |
| Pages: |
773-82 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Taiyab A |
| Year: |
2022 |
| Journal: |
J Neurosci Res |
| Title: |
Deletion of transcription factor AP-2β from the developing murine trabecular meshwork region leads to progressive glaucomatous changes. |
| Volume: |
100 |
| Issue: |
2 |
| Pages: |
638-652 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nguyen MA |
| Year: |
2011 |
| Journal: |
Brain |
| Title: |
Hypertrophy and dietary tyrosine ameliorate the phenotypes of a mouse model of severe nemaline myopathy. |
| Volume: |
134 |
| Issue: |
Pt 12 |
| Pages: |
3516-29 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wutz A |
| Year: |
1998 |
| Journal: |
Mol Cell Endocrinol |
| Title: |
Imprinting of the mouse Igf2r gene depends on an intronic CpG island. |
| Volume: |
140 |
| Issue: |
1-2 |
| Pages: |
9-14 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
277
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
207
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
Over 70 metallopeptidase families have been identified to date. In these enzymes a divalent cation which is usually zinc, but may be cobalt, manganese or copper, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. In some families of co-catalytic metallopeptidases, two metal ions are observed in crystal structures ligated by five amino acids, with one amino acid ligating both metal ions. The known metal ligands are His, Glu, Asp or Lys. At least one other residue is required for catalysis, which may play an electrophillic role. Many metalloproteases contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases [].This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B.The carboxypeptidase A family can be divided into four subfamilies: M14A(carboxypeptidase A or digestive), M14B (carboxypeptidase H or regulatory), M14C (gamma-D-glutamyl-L-diamino acid peptidase I) and M14D (AGTPBP-1/Nna1-like proteins) [, ]. Members of subfamily M14B have longer C-termini than those of subfamily M14A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble [].ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain [, , , ].The zinc ligands have been determined as two histidines and a glutamate,and the catalytic residue has been identified as a C-terminal glutamate,but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended α-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. |
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| Publication |
| First Author: |
Morriss GR |
| Year: |
2018 |
| Journal: |
Hum Mol Genet |
| Title: |
Mechanisms of skeletal muscle wasting in a mouse model for myotonic dystrophy type 1. |
| Volume: |
27 |
| Issue: |
16 |
| Pages: |
2789-2804 |
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| Publication |
| First Author: |
Gabriel JM |
| Year: |
1999 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
A transgene insertion creating a heritable chromosome deletion mouse model of Prader-Willi and angelman syndromes. |
| Volume: |
96 |
| Issue: |
16 |
| Pages: |
9258-63 |
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| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
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| Publication |
| First Author: |
Kupz A |
| Year: |
2016 |
| Journal: |
J Clin Invest |
| Title: |
ESAT-6-dependent cytosolic pattern recognition drives noncognate tuberculosis control in vivo. |
| Volume: |
126 |
| Issue: |
6 |
| Pages: |
2109-22 |
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| Publication |
| First Author: |
Ribic A |
| Year: |
2019 |
| Journal: |
Cell Rep |
| Title: |
Synapse-Selective Control of Cortical Maturation and Plasticity by Parvalbumin-Autonomous Action of SynCAM 1. |
| Volume: |
26 |
| Issue: |
2 |
| Pages: |
381-393.e6 |
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| Publication |
| First Author: |
Hagiwara A |
| Year: |
2020 |
| Journal: |
Sci Rep |
| Title: |
Impaired experience-dependent maternal care in presynaptic active zone protein CAST-deficient dams. |
| Volume: |
10 |
| Issue: |
1 |
| Pages: |
5238 |
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| Publication |
| First Author: |
Kashishian A |
| Year: |
1992 |
| Journal: |
EMBO J |
| Title: |
Phosphorylation sites in the PDGF receptor with different specificities for binding GAP and PI3 kinase in vivo. |
| Volume: |
11 |
| Issue: |
4 |
| Pages: |
1373-82 |
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| Publication |
| First Author: |
Battesti A |
| Year: |
2011 |
| Journal: |
Annu Rev Microbiol |
| Title: |
The RpoS-mediated general stress response in Escherichia coli. |
| Volume: |
65 |
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| Pages: |
189-213 |
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| Publication |
| First Author: |
Ishihama A |
| Year: |
1998 |
| Journal: |
Curr Opin Microbiol |
| Title: |
Subunits of yeast RNA polymerases: structure and function. |
| Volume: |
1 |
| Issue: |
2 |
| Pages: |
190-6 |
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| Publication |
| First Author: |
Kazlauskas A |
| Year: |
1991 |
| Journal: |
Cell Regul |
| Title: |
Functions of the major tyrosine phosphorylation site of the PDGF receptor beta subunit. |
| Volume: |
2 |
| Issue: |
6 |
| Pages: |
413-25 |
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| Publication |
| First Author: |
Ruiz-Otero N |
| Year: |
2023 |
| Journal: |
Front Endocrinol (Lausanne) |
| Title: |
Role of Delta/Notch-like EGF-related receptor in blood glucose homeostasis. |
| Volume: |
14 |
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| Pages: |
1161085 |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
147
 |
| Fragment?: |
true |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
162
 |
| Fragment?: |
true |
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| Publication |
| First Author: |
Livraghi A |
| Year: |
2009 |
| Journal: |
J Immunol |
| Title: |
Airway and lung pathology due to mucosal surface dehydration in {beta}-epithelial Na+ channel-overexpressing mice: role of TNF-{alpha} and IL-4R{alpha} signaling, influence of neonatal development, and limited efficacy of glucocorticoid treatment. |
| Volume: |
182 |
| Issue: |
7 |
| Pages: |
4357-67 |
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| Publication |
| First Author: |
Köhrmann A |
| Year: |
2009 |
| Journal: |
BMC Cancer |
| Title: |
Expression of matrix metalloproteinases (MMPs) in primary human breast cancer and breast cancer cell lines: New findings and review of the literature. |
| Volume: |
9 |
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| Pages: |
188 |
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| Publication |
| First Author: |
Blomstergren A |
| Year: |
2004 |
| Journal: |
Gene |
| Title: |
Comparative analysis of the complete cag pathogenicity island sequence in four Helicobacter pylori isolates. |
| Volume: |
328 |
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| Pages: |
85-93 |
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| Publication |
| First Author: |
Kharbanda A |
| Year: |
2020 |
| Journal: |
Sci Signal |
| Title: |
Blocking EGFR palmitoylation suppresses PI3K signaling and mutant KRAS lung tumorigenesis. |
| Volume: |
13 |
| Issue: |
621 |
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| Publication |
| First Author: |
Nakayama A |
| Year: |
1998 |
| Journal: |
Mech Dev |
| Title: |
Mutations in microphthalmia, the mouse homolog of the human deafness gene MITF, affect neuroepithelial and neural crest-derived melanocytes differently. |
| Volume: |
70 |
| Issue: |
1-2 |
| Pages: |
155-66 |
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| Publication |
| First Author: |
Li J |
| Year: |
2021 |
| Journal: |
J Clin Invest |
| Title: |
TorsinA restoration in a mouse model identifies a critical therapeutic window for DYT1 dystonia. |
| Volume: |
131 |
| Issue: |
6 |
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| Publication |
| First Author: |
Kandyba E |
| Year: |
2013 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Competitive balance of intrabulge BMP/Wnt signaling reveals a robust gene network ruling stem cell homeostasis and cyclic activation. |
| Volume: |
110 |
| Issue: |
4 |
| Pages: |
1351-6 |
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| Publication |
| First Author: |
Di Cristofano A |
| Year: |
1998 |
| Journal: |
J Biol Chem |
| Title: |
Molecular cloning and characterization of p56dok-2 defines a new family of RasGAP-binding proteins. |
| Volume: |
273 |
| Issue: |
9 |
| Pages: |
4827-30 |
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| Publication |
| First Author: |
Gosain A |
| Year: |
2015 |
| Journal: |
PLoS One |
| Title: |
Impaired Cellular Immunity in the Murine Neural Crest Conditional Deletion of Endothelin Receptor-B Model of Hirschsprung's Disease. |
| Volume: |
10 |
| Issue: |
6 |
| Pages: |
e0128822 |
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| Publication |
| First Author: |
Ylikorkala A |
| Year: |
2001 |
| Journal: |
Science |
| Title: |
Vascular abnormalities and deregulation of VEGF in Lkb1-deficient mice. |
| Volume: |
293 |
| Issue: |
5533 |
| Pages: |
1323-6 |
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| Publication |
| First Author: |
Orekhova A |
| Year: |
2020 |
| Journal: |
Am J Physiol Gastrointest Liver Physiol |
| Title: |
Ethanol feeding accelerates pancreatitis progression in CPA1 N256K mutant mice. |
| Volume: |
318 |
| Issue: |
4 |
| Pages: |
G694-G704 |
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| Publication |
| First Author: |
Agah A |
| Year: |
2005 |
| Journal: |
Am J Pathol |
| Title: |
Proteolysis of cell-surface tissue transglutaminase by matrix metalloproteinase-2 contributes to the adhesive defect and matrix abnormalities in thrombospondin-2-null fibroblasts and mice. |
| Volume: |
167 |
| Issue: |
1 |
| Pages: |
81-8 |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
122
 |
| Fragment?: |
true |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
128
 |
| Fragment?: |
false |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
163
 |
| Fragment?: |
false |
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| Publication |
| First Author: |
Galhardo RS |
| Year: |
2005 |
| Journal: |
Nucleic Acids Res |
| Title: |
An SOS-regulated operon involved in damage-inducible mutagenesis in Caulobacter crescentus. |
| Volume: |
33 |
| Issue: |
8 |
| Pages: |
2603-14 |
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| Protein Domain |
| Type: |
Family |
| Description: |
Members of the golgin subfamily A were identified as Golgi auto-antigens []. They might be involved in maintaining cis-Golgi structure []. One of the members of this family, member 2 or GM130, is a specific interacting partner of the small GTPase Rab1b []and plays a key role in the disassembly and reassembly of the Golgi apparatus during mitosis. GM130 is also involved in vesicle tethering and fusion at the cis-cisternae to facilitate transit between transport vesicles and the stacked cisternae. It interacts with GRASPs proteins, which mediate the stacking of Golgi cisternae []. Additionally, GM130 was localised to the spindle poles and regulates microtubule organization [].Structurally, GM130 is comprised of six coiled-coil regions in the middle, a Golgi-targeting domain at the C terminus, and a p115-interacting motif at the N terminus []. |
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| Protein Domain |
| Type: |
Family |
| Description: |
This entry represents inducible mutagenesis protein A (ImuA), believed to be involved in DNA damage tolerance in a number of bacteria. This protein is often encoded in a operon with DnaE2 (a second copy of the catalytic subunit of DNA polymerase III), and ImuB (whose function is not known though it is similar to the Y-family of DNA polymerases), though the genes may also be encoded in separate regions. In Caulobacter crescentus (Caulobacter vibrioides) the imuAB/dnaE2 operon is induced by DNA damage in a RecA-dependent manner and is required for the error-prone processing of DNA lesions []. Strains deficient in these genes showed extreme sensitivity to mutagenic agents such as UV or the drug mitC. The function of ImuA is not known but sequence analysis suggests that it contains a P-loop nucleoside triphosphate hydrolase domain. |
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| Protein Domain |
| Type: |
Family |
| Description: |
Equid herpesvirus 1 (Equine herpesvirus 1, EHV-1) glycoprotein 13 (EHV-1 gp13) has the characteristic features of a membrane-spanning protein: an N-terminal signal sequence; a hydrophobic membrane anchor region; a charged C-terminal cytoplasmic tail; and an exterior domain with nine potential N-glycosylation sites []. EHV-1 gp13 is the structural homologue of the gC-like glycoproteins of the Human herpesvirus 1 (HHV-1) and Human herpesvirus 2 (HHV-2) (gC-1 and gC-2 respectively), Pseudorabies virus (strain Indiana-Funkhauser/Becker) (PRV) (gIII) and Human herpesvirus 3 (HHV-3) (gp66). Secretory glycoprotein GP57-65 precursor (glycoprotein A - GA) is similar to Herpesvirus glycoprotein C, and belongs to the immunoglobulin gene superfamily [, ]. GA is thought to play an immunoevasive role in the pathogenesis of Marek's disease. It is a candidate for causing the early-stage immunosuppression that occurs after MDHV infection. |
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| Publication |
| First Author: |
Bouska A |
| Year: |
2008 |
| Journal: |
Mol Cell Biol |
| Title: |
Mdm2 promotes genetic instability and transformation independent of p53. |
| Volume: |
28 |
| Issue: |
15 |
| Pages: |
4862-74 |
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| Publication |
| First Author: |
Morton JP |
| Year: |
2010 |
| Journal: |
Gastroenterology |
| Title: |
LKB1 haploinsufficiency cooperates with Kras to promote pancreatic cancer through suppression of p21-dependent growth arrest. |
| Volume: |
139 |
| Issue: |
2 |
| Pages: |
586-97, 597.e1-6 |
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| Publication |
| First Author: |
Lin TM |
| Year: |
2001 |
| Journal: |
J Toxicol Environ Health A |
| Title: |
Role of the aryl hydrocarbon receptor in the development of control and 2,3,7,8-tetrachlorodibenzo-p-dioxin-exposed male mice. |
| Volume: |
64 |
| Issue: |
4 |
| Pages: |
327-42 |
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| Publication |
| First Author: |
Werner JL |
| Year: |
2011 |
| Journal: |
Infect Immun |
| Title: |
Neutrophils produce interleukin 17A (IL-17A) in a dectin-1- and IL-23-dependent manner during invasive fungal infection. |
| Volume: |
79 |
| Issue: |
10 |
| Pages: |
3966-77 |
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| Publication |
| First Author: |
Eden A |
| Year: |
2003 |
| Journal: |
Science |
| Title: |
Chromosomal instability and tumors promoted by DNA hypomethylation. |
| Volume: |
300 |
| Issue: |
5618 |
| Pages: |
455 |
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| Publication |
| First Author: |
Müller AJ |
| Year: |
2012 |
| Journal: |
Immunity |
| Title: |
CD4+ T cells rely on a cytokine gradient to control intracellular pathogens beyond sites of antigen presentation. |
| Volume: |
37 |
| Issue: |
1 |
| Pages: |
147-57 |
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