| Type |
Details |
Score |
| Publication |
| First Author: |
Fatima S |
| Year: |
2017 |
| Journal: |
Biochim Biophys Acta |
| Title: |
Interactome of the inhibitory isoform of the nuclear transporter Importin 13. |
| Volume: |
1864 |
| Issue: |
3 |
| Pages: |
546-561 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gajewska KA |
| Year: |
2022 |
| Journal: |
Cells |
| Title: |
Nuclear Transporter IPO13 Is Central to Efficient Neuronal Differentiation. |
| Volume: |
11 |
| Issue: |
12 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Fatima S |
| Year: |
2021 |
| Journal: |
Biochem Biophys Res Commun |
| Title: |
The nuclear transporter importin 13 is critical for cell survival during embryonic stem cell differentiation. |
| Volume: |
534 |
|
| Pages: |
141-148 |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Ipo13/Ipo13 |
| Background: |
involves: 129P2/OlaHsd |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yan J |
| Year: |
2024 |
| Journal: |
Cell Rep |
| Title: |
Inherent preference for polyunsaturated fatty acids instigates ferroptosis of Treg cells that aggravates high-fat-diet-related colitis. |
| Volume: |
43 |
| Issue: |
8 |
| Pages: |
114636 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Luo X |
| Year: |
2024 |
| Journal: |
Cell Death Differ |
| Title: |
Phospholipid peroxidation in macrophage confers tumor resistance by suppressing phagocytic capability towards ferroptotic cells. |
| Volume: |
31 |
| Issue: |
9 |
| Pages: |
1184-1201 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tokuhiro T |
| Year: |
2021 |
| Journal: |
Front Cell Dev Biol |
| Title: |
Oxidized Phospholipids and Neutrophil Elastase Coordinately Play Critical Roles in NET Formation. |
| Volume: |
9 |
|
| Pages: |
718586 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tu LF |
| Year: |
2023 |
| Journal: |
J Adv Res |
| Title: |
GPX4 deficiency-dependent phospholipid peroxidation drives motor deficits of ALS. |
| Volume: |
43 |
|
| Pages: |
205-218 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wang Y |
| Year: |
2022 |
| Journal: |
Nat Immunol |
| Title: |
The kinase complex mTORC2 promotes the longevity of virus-specific memory CD4+ T cells by preventing ferroptosis. |
| Volume: |
23 |
| Issue: |
2 |
| Pages: |
303-317 |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Ranbp2/Ranbp2 |
| Background: |
involves: 129/Sv * C57BL/6 |
| Zygosity: |
ht |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Gpx4/Gpx4 Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> |
| Background: |
involves: 129S1/Sv * 129S6/SvEvTac * 129X1/SvJ * C57BL/6 * SJL |
| Zygosity: |
cn |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bressan A |
| Year: |
1991 |
| Journal: |
Gene |
| Title: |
Characterization of the opposite-strand genes from the mouse bidirectionally transcribed HTF9 locus. |
| Volume: |
103 |
| Issue: |
2 |
| Pages: |
201-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Fu J |
| Year: |
2014 |
| Journal: |
PLoS Genet |
| Title: |
Disruption of SUMO-specific protease 2 induces mitochondria mediated neurodegeneration. |
| Volume: |
10 |
| Issue: |
10 |
| Pages: |
e1004579 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Evdokimov E |
| Year: |
2008 |
| Journal: |
J Cell Sci |
| Title: |
Loss of SUMO1 in mice affects RanGAP1 localization and formation of PML nuclear bodies, but is not lethal as it can be compensated by SUMO2 or SUMO3. |
| Volume: |
121 |
| Issue: |
Pt 24 |
| Pages: |
4106-13 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
He Y |
| Year: |
2021 |
| Journal: |
Elife |
| Title: |
T-cell receptor (TCR) signaling promotes the assembly of RanBP2/RanGAP1-SUMO1/Ubc9 nuclear pore subcomplex via PKC-θ-mediated phosphorylation of RanGAP1. |
| Volume: |
10 |
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kragness S |
| Year: |
2022 |
| Journal: |
PLoS One |
| Title: |
An Rtn4/Nogo-A-interacting micropeptide modulates synaptic plasticity with age. |
| Volume: |
17 |
| Issue: |
6 |
| Pages: |
e0269404 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Olsson M |
| Year: |
2004 |
| Journal: |
Exp Cell Res |
| Title: |
Limited expression of nuclear pore membrane glycoprotein 210 in cell lines and tissues suggests cell-type specific nuclear pores in metazoans. |
| Volume: |
292 |
| Issue: |
2 |
| Pages: |
359-70 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Khalaf B |
| Year: |
2019 |
| Journal: |
J Cell Sci |
| Title: |
Ankyrin-G induces nucleoporin Nup358 to associate with the axon initial segment of neurons. |
| Volume: |
132 |
| Issue: |
18 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bourne HR |
| Year: |
1991 |
| Journal: |
Nature |
| Title: |
The GTPase superfamily: conserved structure and molecular mechanism. |
| Volume: |
349 |
| Issue: |
6305 |
| Pages: |
117-27 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hayashi N |
| Year: |
1995 |
| Journal: |
Mol Gen Genet |
| Title: |
RanBP1, a Ras-like nuclear G protein binding to Ran/TC4, inhibits RCC1 via Ran/TC4. |
| Volume: |
247 |
| Issue: |
6 |
| Pages: |
661-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gkogkas CG |
| Year: |
2013 |
| Journal: |
Nature |
| Title: |
Autism-related deficits via dysregulated eIF4E-dependent translational control. |
| Volume: |
493 |
| Issue: |
7432 |
| Pages: |
371-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Li J |
| Year: |
2008 |
| Journal: |
Dev Cell |
| Title: |
Synergistic function of E2F7 and E2F8 is essential for cell survival and embryonic development. |
| Volume: |
14 |
| Issue: |
1 |
| Pages: |
62-75 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bertram MJ |
| Year: |
1999 |
| Journal: |
Mol Cell Biol |
| Title: |
Identification of a gene that reverses the immortal phenotype of a subset of cells and is a member of a novel family of transcription factor-like genes. |
| Volume: |
19 |
| Issue: |
2 |
| Pages: |
1479-85 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nelson CE |
| Year: |
2016 |
| Journal: |
Science |
| Title: |
In vivo genome editing improves muscle function in a mouse model of Duchenne muscular dystrophy. |
| Volume: |
351 |
| Issue: |
6271 |
| Pages: |
403-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tabebordbar M |
| Year: |
2016 |
| Journal: |
Science |
| Title: |
In vivo gene editing in dystrophic mouse muscle and muscle stem cells. |
| Volume: |
351 |
| Issue: |
6271 |
| Pages: |
407-411 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bi X |
| Year: |
2021 |
| Journal: |
Adv Sci (Weinh) |
| Title: |
Mitochondrial Damage-Induced Innate Immune Activation in Vascular Smooth Muscle Cells Promotes Chronic Kidney Disease-Associated Plaque Vulnerability. |
| Volume: |
8 |
| Issue: |
5 |
| Pages: |
2002738 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Chen M |
| Year: |
2017 |
| Journal: |
Elife |
| Title: |
APP modulates KCC2 expression and function in hippocampal GABAergic inhibition. |
| Volume: |
6 |
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Pharaoh G |
| Year: |
2020 |
| Journal: |
Sci Rep |
| Title: |
Targeting cPLA2 derived lipid hydroperoxides as a potential intervention for sarcopenia. |
| Volume: |
10 |
| Issue: |
1 |
| Pages: |
13968 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yu J |
| Year: |
2023 |
| Journal: |
Cell Mol Immunol |
| Title: |
The OX40-TRAF6 axis promotes CTLA-4 degradation to augment antitumor CD8(+) T-cell immunity. |
| Volume: |
20 |
| Issue: |
12 |
| Pages: |
1445-1456 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Xie Z |
| Year: |
2021 |
| Journal: |
Elife |
| Title: |
Transcriptomic encoding of sensorimotor transformation in the midbrain. |
| Volume: |
10 |
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
von Roemeling CA |
| Year: |
2024 |
| Journal: |
Nat Commun |
| Title: |
Adeno-associated virus delivered CXCL9 sensitizes glioblastoma to anti-PD-1 immune checkpoint blockade. |
| Volume: |
15 |
| Issue: |
1 |
| Pages: |
5871 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Moore BD |
| Year: |
2018 |
| Journal: |
J Exp Med |
| Title: |
Short Aβ peptides attenuate Aβ42 toxicity in vivo. |
| Volume: |
215 |
| Issue: |
1 |
| Pages: |
283-301 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ding W |
| Year: |
2023 |
| Journal: |
Nat Commun |
| Title: |
The endocannabinoid N-arachidonoyl dopamine is critical for hyperalgesia induced by chronic sleep disruption. |
| Volume: |
14 |
| Issue: |
1 |
| Pages: |
6696 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Moore AR |
| Year: |
2018 |
| Journal: |
Cell Rep |
| Title: |
GNA11 Q209L Mouse Model Reveals RasGRP3 as an Essential Signaling Node in Uveal Melanoma. |
| Volume: |
22 |
| Issue: |
9 |
| Pages: |
2455-2468 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Roy S |
| Year: |
2018 |
| Journal: |
Cancer Res |
| Title: |
Macrophage-Derived Neuropilin-2 Exhibits Novel Tumor-Promoting Functions. |
| Volume: |
78 |
| Issue: |
19 |
| Pages: |
5600-5617 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kim TD |
| Year: |
2017 |
| Journal: |
Sci Rep |
| Title: |
MicroRNA-150 modulates intracellular Ca 2+ levels in naïve CD8+ T cells by targeting TMEM20. |
| Volume: |
7 |
| Issue: |
1 |
| Pages: |
2623 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ren J |
| Year: |
2018 |
| Journal: |
Cell |
| Title: |
Anatomically Defined and Functionally Distinct Dorsal Raphe Serotonin Sub-systems. |
| Volume: |
175 |
| Issue: |
2 |
| Pages: |
472-487.e20 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Moutal A |
| Year: |
2020 |
| Journal: |
Pain |
| Title: |
Studies on CRMP2 SUMOylation-deficient transgenic mice identify sex-specific Nav1.7 regulation in the pathogenesis of chronic neuropathic pain. |
| Volume: |
161 |
| Issue: |
11 |
| Pages: |
2629-2651 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhang XY |
| Year: |
2013 |
| Journal: |
Am J Hum Genet |
| Title: |
Gain-of-function mutations in SCN11A cause familial episodic pain. |
| Volume: |
93 |
| Issue: |
5 |
| Pages: |
957-66 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Park HJ |
| Year: |
2015 |
| Journal: |
EMBO J |
| Title: |
The stress response neuropeptide CRF increases amyloid-β production by regulating γ-secretase activity. |
| Volume: |
34 |
| Issue: |
12 |
| Pages: |
1674-86 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Shen S |
| Year: |
2017 |
| Journal: |
Nat Neurosci |
| Title: |
Gut microbiota is critical for the induction of chemotherapy-induced pain. |
| Volume: |
20 |
| Issue: |
9 |
| Pages: |
1213-1216 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Peng W |
| Year: |
2019 |
| Journal: |
FASEB J |
| Title: |
Trophoblastic proliferation and invasion regulated by ACTN4 is impaired in early onset preeclampsia. |
| Volume: |
33 |
| Issue: |
5 |
| Pages: |
6327-6338 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wang S |
| Year: |
2019 |
| Journal: |
Sci Rep |
| Title: |
FOXS1 is regulated by GLI1 and miR-125a-5p and promotes cell proliferation and EMT in gastric cancer. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
5281 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wang L |
| Year: |
2020 |
| Journal: |
Nature |
| Title: |
Host-mediated ubiquitination of a mycobacterial protein suppresses immunity. |
| Volume: |
577 |
| Issue: |
7792 |
| Pages: |
682-688 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gomez K |
| Year: |
2023 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Identification and targeting of a unique Na(V)1.7 domain driving chronic pain. |
| Volume: |
120 |
| Issue: |
32 |
| Pages: |
e2217800120 |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
Baseline |
| Source: |
GEO |
|
•
•
•
•
•
|
| GO Term |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yamaguchi T |
| Year: |
2005 |
| Journal: |
Mol Cell Biol |
| Title: |
Mutation of SENP1/SuPr-2 reveals an essential role for desumoylation in mouse development. |
| Volume: |
25 |
| Issue: |
12 |
| Pages: |
5171-82 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Shiroshima T |
| Year: |
2009 |
| Journal: |
FEBS Lett |
| Title: |
Identification of LRP1B-interacting proteins and inhibition of protein kinase Calpha-phosphorylation of LRP1B by association with PICK1. |
| Volume: |
583 |
| Issue: |
1 |
| Pages: |
43-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Maynard TM |
| Year: |
2002 |
| Journal: |
Mech Dev |
| Title: |
RanBP1, a velocardiofacial/DiGeorge syndrome candidate gene, is expressed at sites of mesenchymal/epithelial induction. |
| Volume: |
111 |
| Issue: |
1-2 |
| Pages: |
177-80 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tamura K |
| Year: |
2010 |
| Journal: |
Plant Cell |
| Title: |
Identification and characterization of nuclear pore complex components in Arabidopsis thaliana. |
| Volume: |
22 |
| Issue: |
12 |
| Pages: |
4084-97 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
This entry represents the Ran-binding domain found in plant NUP50 protein. NUP50 is a nuclear pore complex component involved in nucleocytoplasmic transport via its interactions with importins and Ran []. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Li P |
| Year: |
2021 |
| Journal: |
Nat Immunol |
| Title: |
Glutathione peroxidase 4-regulated neutrophil ferroptosis induces systemic autoimmunity. |
| Volume: |
22 |
| Issue: |
9 |
| Pages: |
1107-1117 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jia M |
| Year: |
2020 |
| Journal: |
Nat Immunol |
| Title: |
Redox homeostasis maintained by GPX4 facilitates STING activation. |
| Volume: |
21 |
| Issue: |
7 |
| Pages: |
727-735 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ide S |
| Year: |
2021 |
| Journal: |
Elife |
| Title: |
Ferroptotic stress promotes the accumulation of pro-inflammatory proximal tubular cells in maladaptive renal repair. |
| Volume: |
10 |
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jiang Z |
| Year: |
2024 |
| Journal: |
Adv Sci (Weinh) |
| Title: |
Ferroptosis in Osteocytes as a Target for Protection Against Postmenopausal Osteoporosis. |
| Volume: |
11 |
| Issue: |
12 |
| Pages: |
e2307388 |
|
•
•
•
•
•
|
| Allele |
| Name: |
gene trap ROSA 26, Philippe Soriano; targeted mutation 2, Evan Rosen |
| Allele Type: |
Targeted |
| Attribute String: |
Conditional ready, Reporter |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Huang Q |
| Year: |
2022 |
| Journal: |
Cell |
| Title: |
The primordial differentiation of tumor-specific memory CD8(+) TÂ cells as bona fide responders to PD-1/PD-L1 blockade in draining lymph nodes. |
| Volume: |
185 |
| Issue: |
22 |
| Pages: |
4049-4066.e25 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Li Y |
| Year: |
2016 |
| Journal: |
Immunity |
| Title: |
Analysis of the Rab GTPase Interactome in Dendritic Cells Reveals Anti-microbial Functions of the Rab32 Complex in Bacterial Containment. |
| Volume: |
44 |
| Issue: |
2 |
| Pages: |
422-37 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Fu Z |
| Year: |
2014 |
| Journal: |
Biol Reprod |
| Title: |
Integral proteomic analysis of blastocysts reveals key molecular machinery governing embryonic diapause and reactivation for implantation in mice. |
| Volume: |
90 |
| Issue: |
3 |
| Pages: |
52 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Fedele C |
| Year: |
2021 |
| Journal: |
J Exp Med |
| Title: |
SHP2 inhibition diminishes KRASG12C cycling and promotes tumor microenvironment remodeling. |
| Volume: |
218 |
| Issue: |
1 |
|
|
•
•
•
•
•
|
| GO Term |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Braunwarth A |
| Year: |
2003 |
| Journal: |
J Biol Chem |
| Title: |
Identification and characterization of a novel RanGTP-binding protein in the yeast Saccharomyces cerevisiae. |
| Volume: |
278 |
| Issue: |
17 |
| Pages: |
15397-405 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Homologous_superfamily |
| Description: |
This entry represents a structural domain consisting of a 3-layer α/β/α fold. The β layer is composed of seven β-sheets, and the overall order is: (β-hairpin)-β(3)-α-β(4)-α. Domains with this structure are found in the following protein families:Ran-binding protein Mog1, which interacts with Ran GTPase to stimulate guanine nucleotide release, suggesting Mog1 regulates the nuclear transport functions of Ran [, ].The photosystem II (PSII) oxygen-evolving complex protein PsbP, which is a regulator necessary for the biogenesis of optically active PSII. PsbP increases the affinity of the water oxidation site for chloride ions and provides the conditions required for high affinity binding of calcium ions []. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
The small Ras-like GTPase Ran plays an essential role in the transport of macromolecules in and out of the nucleus and has been implicated in spindle and nuclear envelope formation during mitosis in higher eukaryotes. The Saccharomyces cerevisiae ORF YGL164c encoding a novel RanGTP-binding protein, termed Yrb30p was identified. The protein competes with S. cerevisiae RanBP1 (Yrb1p) for binding to the GTP-bound form of S. cerevisiae Ran (Gsp1p) and is, like Yrb1p, able to form trimeric complexes with RanGTP and some of the karyopherins []. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ma L |
| Year: |
2009 |
| Journal: |
PLoS Genet |
| Title: |
GASZ is essential for male meiosis and suppression of retrotransposon expression in the male germline. |
| Volume: |
5 |
| Issue: |
9 |
| Pages: |
e1000635 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tarabay Y |
| Year: |
2017 |
| Journal: |
J Cell Sci |
| Title: |
Tex19 paralogs are new members of the piRNA pathway controlling retrotransposon suppression. |
| Volume: |
130 |
| Issue: |
8 |
| Pages: |
1463-1474 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Takahashi H |
| Year: |
2005 |
| Journal: |
J Biol Chem |
| Title: |
Noncovalent SUMO-1 binding activity of thymine DNA glycosylase (TDG) is required for its SUMO-1 modification and colocalization with the promyelocytic leukemia protein. |
| Volume: |
280 |
| Issue: |
7 |
| Pages: |
5611-21 |
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| Publication |
| First Author: |
Ide S |
| Year: |
2022 |
| Journal: |
Cell Rep |
| Title: |
Sex differences in resilience to ferroptosis underlie sexual dimorphism in kidney injury and repair. |
| Volume: |
41 |
| Issue: |
6 |
| Pages: |
111610 |
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•
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| Publication |
| First Author: |
Liu D |
| Year: |
2023 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Mouse models susceptible to HCoV-229E and HCoV-NL63 and cross protection from challenge with SARS-CoV-2. |
| Volume: |
120 |
| Issue: |
4 |
| Pages: |
e2202820120 |
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•
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| Publication |
| First Author: |
Yulyaningsih E |
| Year: |
2024 |
| Journal: |
Elife |
| Title: |
DNL343 is an investigational CNS penetrant eukaryotic initiation factor 2B activator that prevents and reverses the effects of neurodegeneration caused by the integrated stress response. |
| Volume: |
12 |
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| Strain |
| Attribute String: |
targeted mutation, mutant stock |
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| HT Experiment |
| Series Id: |
E-GEOD-63674 |
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
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•
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| Publication |
| First Author: |
Xu XM |
| Year: |
2007 |
| Journal: |
Curr Biol |
| Title: |
Anchorage of plant RanGAP to the nuclear envelope involves novel nuclear-pore-associated proteins. |
| Volume: |
17 |
| Issue: |
13 |
| Pages: |
1157-63 |
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| Protein Domain |
| Type: |
Domain |
| Description: |
This entry represents the Ran-binding domain (RBD) found in RanBP1 from humans and Yrb1 from budding yeasts. RanBP1 and Yrb1 are involved in nuclear import and export. RanBP1 and Yrb1 have been shown to shuttle between the nucleus and cytoplasm and the conserved RBD is necessary and sufficient for the essential function and nucleocytoplasmic shuttling []. RanBP1/Yrb1 acts as a negative regulator of Regulator of chromosome condensation 1 (RCC1) by inhibiting RCC1-stimulated guanine nucleotide release from Ran []. |
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| Protein Domain |
| Type: |
Family |
| Description: |
Segregation of nuclear and cytoplasmic processes facilitates regulation of many eukaryotic cellular functions such as gene expression and cell cycle progression. Trafficking through the nuclear pore requires a number of highly conserved soluble factors that escort macromolecular substrates into and out of the nucleus. The Mog1 protein has been shown to interact with RanGTP, which stimulates guanine nucleotide release, suggesting Mog1 regulates the nuclear transport functions of Ran []. The human homologue of Mog1 is thought to be alternatively spliced. |
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| Protein Domain |
| Type: |
Family |
| Description: |
This entry represents the WPP domain-interacting protein (WIP) family which includes WIP1, 2 and 3 from Arabidopsis. These proteins are specific to plants and required for the localisation and anchorage of Ran GTPase-activating proteins (RanGAP) to the nuclear envelope (NE) mediated by WIT1 and WIT2 in undifferentiated cells of root tips [, ]. They are part of the SUN-WIP-WIT2-KAKU1 complex, in which they mediate the transfer of cytoplasmic forces to the nuclear envelope (NE), leading to nuclear shape changes []. |
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
107
 |
| Fragment?: |
true |
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| Publication |
| First Author: |
Mahajan R |
| Year: |
1997 |
| Journal: |
Cell |
| Title: |
A small ubiquitin-related polypeptide involved in targeting RanGAP1 to nuclear pore complex protein RanBP2. |
| Volume: |
88 |
| Issue: |
1 |
| Pages: |
97-107 |
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•
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| Publication |
| First Author: |
Asamitsu S |
| Year: |
2021 |
| Journal: |
Sci Adv |
| Title: |
CGG repeat RNA G-quadruplexes interact with FMRpolyG to cause neuronal dysfunction in fragile X-related tremor/ataxia syndrome. |
| Volume: |
7 |
| Issue: |
3 |
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•
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| Publication |
| First Author: |
Dupree P |
| Year: |
1992 |
| Journal: |
Gene |
| Title: |
Sequence of a canine cDNA clone encoding a Ran/TC4 GTP-binding protein. |
| Volume: |
120 |
| Issue: |
2 |
| Pages: |
325-6 |
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| Publication |
| First Author: |
Weis K |
| Year: |
1995 |
| Journal: |
Science |
| Title: |
Identification of hSRP1 alpha as a functional receptor for nuclear localization sequences. |
| Volume: |
268 |
| Issue: |
5213 |
| Pages: |
1049-53 |
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•
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| Publication |
| First Author: |
Meechan DW |
| Year: |
2009 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Diminished dosage of 22q11 genes disrupts neurogenesis and cortical development in a mouse model of 22q11 deletion/DiGeorge syndrome. |
| Volume: |
106 |
| Issue: |
38 |
| Pages: |
16434-45 |
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| Publication |
| First Author: |
Kim EY |
| Year: |
2012 |
| Journal: |
J Mol Cell Cardiol |
| Title: |
Enhanced desumoylation in murine hearts by overexpressed SENP2 leads to congenital heart defects and cardiac dysfunction. |
| Volume: |
52 |
| Issue: |
3 |
| Pages: |
638-49 |
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•
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| Publication |
| First Author: |
Liu S |
| Year: |
2020 |
| Journal: |
Mol Psychiatry |
| Title: |
Mutations in ASH1L confer susceptibility to Tourette syndrome. |
| Volume: |
25 |
| Issue: |
2 |
| Pages: |
476-490 |
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•
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| HT Experiment |
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| Experiment Type: |
RNA-Seq |
| Study Type: |
Baseline |
| Source: |
GEO |
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| GO Term |
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•
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| Publication |
| First Author: |
von Ziegler LM |
| Year: |
2022 |
| Journal: |
Nat Commun |
| Title: |
Multiomic profiling of the acute stress response in the mouse hippocampus. |
| Volume: |
13 |
| Issue: |
1 |
| Pages: |
1824 |
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•
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| Publication |
| First Author: |
Raus AM |
| Year: |
2023 |
| Journal: |
Commun Biol |
| Title: |
Early-life exercise primes the murine neural epigenome to facilitate gene expression and hippocampal memory consolidation. |
| Volume: |
6 |
| Issue: |
1 |
| Pages: |
18 |
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•
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| Publication |
| First Author: |
Yucel N |
| Year: |
2020 |
| Journal: |
Elife |
| Title: |
Cardiac endothelial cells maintain open chromatin and expression of cardiomyocyte myofibrillar genes. |
| Volume: |
9 |
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| Publication |
| First Author: |
Kellogg CM |
| Year: |
2023 |
| Journal: |
iScience |
| Title: |
Specificity and efficiency of tamoxifen-mediated Cre induction is equivalent regardless of age. |
| Volume: |
26 |
| Issue: |
12 |
| Pages: |
108413 |
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•
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| Publication |
| First Author: |
Chucair-Elliott AJ |
| Year: |
2022 |
| Journal: |
Neurobiol Dis |
| Title: |
Translatomic response of retinal Müller glia to acute and chronic stress. |
| Volume: |
175 |
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| Pages: |
105931 |
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•
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| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
298
 |
| Fragment?: |
true |
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•
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| Publication |
| First Author: |
Belham C |
| Year: |
2003 |
| Journal: |
J Biol Chem |
| Title: |
A mitotic cascade of NIMA family kinases. Nercc1/Nek9 activates the Nek6 and Nek7 kinases. |
| Volume: |
278 |
| Issue: |
37 |
| Pages: |
34897-909 |
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•
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| Publication |
| First Author: |
Tan BC |
| Year: |
2004 |
| Journal: |
J Biol Chem |
| Title: |
Nek9, a novel FACT-associated protein, modulates interphase progression. |
| Volume: |
279 |
| Issue: |
10 |
| Pages: |
9321-30 |
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•
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| Publication |
| First Author: |
Kurisaki A |
| Year: |
2006 |
| Journal: |
Mol Cell Biol |
| Title: |
The mechanism of nuclear export of Smad3 involves exportin 4 and Ran. |
| Volume: |
26 |
| Issue: |
4 |
| Pages: |
1318-32 |
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•
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| Protein Domain |
| Type: |
Domain |
| Description: |
STKs (serine/threonine-protein kinases) catalyse the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization []. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression []. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Nek9 is one in a family of 11 different Neks (Nek1-11) that are involved in cell cycle control [, ]. |
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| Protein Domain |
| Type: |
Family |
| Description: |
Exportins bind cargo molecules in the nuclei and transport them through nuclear pores to the cytoplasm, a process that requires RanGTP. This entry includes Exportin 4 and 7 (also known as RanBP16), proteins that mediate the nuclear export of proteins with broad substrate specificity. They bind cooperatively to its cargo and to the GTPase Ran in its active GTP-bound form. Exportin 4 transports the eukaryotic translation initiation factor 5A (eIF-5A) and Smad3, controlling protein synthesis and Smad signalling [, ].This entry also includes Ran-binding protein 17 from humans. |
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| Publication |
| First Author: |
Hemberger M |
| Year: |
2000 |
| Journal: |
Dev Biol |
| Title: |
cDNA subtraction cloning reveals novel genes whose temporal and spatial expression indicates association with trophoblast invasion. |
| Volume: |
222 |
| Issue: |
1 |
| Pages: |
158-69 |
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