| Type |
Details |
Score |
| Publication |
| First Author: |
Dunigan-Russell K |
| Year: |
2020 |
| Journal: |
Oxid Med Cell Longev |
| Title: |
Club Cell Heme Oxygenase-1 Deletion: Effects in Hyperoxia-Exposed Adult Mice. |
| Volume: |
2020 |
|
| Pages: |
2908271 |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Delpoux A |
| Year: |
2018 |
| Journal: |
J Exp Med |
| Title: |
Continuous activity of Foxo1 is required to prevent anergy and maintain the memory state of CD8+ T cells. |
| Volume: |
215 |
| Issue: |
2 |
| Pages: |
575-594 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Fu A |
| Year: |
2020 |
| Journal: |
Biol Reprod |
| Title: |
IRX3 and IRX5 collaborate during ovary development and follicle formation to establish responsive granulosa cells in the adult mouse†. |
| Volume: |
103 |
| Issue: |
3 |
| Pages: |
620-629 |
|
•
•
•
•
•
|
| GO Term |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhang C |
| Year: |
2005 |
| Journal: |
Mol Cell Biol |
| Title: |
MafA is a key regulator of glucose-stimulated insulin secretion. |
| Volume: |
25 |
| Issue: |
12 |
| Pages: |
4969-76 |
|
•
•
•
•
•
|
| CL Term |
|
•
•
•
•
•
|
| CL Term |
|
•
•
•
•
•
|
| CL Term |
|
•
•
•
•
•
|
| CL Term |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kumar A |
| Year: |
2024 |
| Journal: |
Biochim Biophys Acta Mol Basis Dis |
| Title: |
Therapeutic targeting of telomerase ameliorates experimental choroidal neovascularization. |
| Volume: |
1870 |
| Issue: |
5 |
| Pages: |
167156 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
MartÃnez de Paz A |
| Year: |
2019 |
| Journal: |
Epigenetics Chromatin |
| Title: |
MeCP2-E1 isoform is a dynamically expressed, weakly DNA-bound protein with different protein and DNA interactions compared to MeCP2-E2. |
| Volume: |
12 |
| Issue: |
1 |
| Pages: |
63 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mak A |
| Year: |
2019 |
| Journal: |
Front Immunol |
| Title: |
Deletion of CD137 Ligand Exacerbates Renal and Cutaneous but Alleviates Cerebral Manifestations in Lupus. |
| Volume: |
10 |
|
| Pages: |
1411 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hino A |
| Year: |
2004 |
| Journal: |
Am J Pathol |
| Title: |
Pathological role of large intestinal IL-12p40 for the induction of Th2-type allergic diarrhea. |
| Volume: |
164 |
| Issue: |
4 |
| Pages: |
1327-35 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Oxenius A |
| Year: |
1999 |
| Journal: |
J Immunol |
| Title: |
IL-12 is not required for induction of type 1 cytokine responses in viral infections. |
| Volume: |
162 |
| Issue: |
2 |
| Pages: |
965-73 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Masic A |
| Year: |
2012 |
| Journal: |
PLoS Negl Trop Dis |
| Title: |
Dendritic cell-mediated vaccination relies on interleukin-4 receptor signaling to avoid tissue damage after Leishmania major infection of BALB/c mice. |
| Volume: |
6 |
| Issue: |
7 |
| Pages: |
e1721 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
311
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hodges A |
| Year: |
2008 |
| Journal: |
Genes Brain Behav |
| Title: |
Brain gene expression correlates with changes in behavior in the R6/1 mouse model of Huntington's disease. |
| Volume: |
7 |
| Issue: |
3 |
| Pages: |
288-99 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Petersén A |
| Year: |
2002 |
| Journal: |
Neurobiol Dis |
| Title: |
Evidence for dysfunction of the nigrostriatal pathway in the R6/1 line of transgenic Huntington's disease mice. |
| Volume: |
11 |
| Issue: |
1 |
| Pages: |
134-46 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Maatkamp A |
| Year: |
2004 |
| Journal: |
Eur J Neurosci |
| Title: |
Decrease of Hsp25 protein expression precedes degeneration of motoneurons in ALS-SOD1 mice. |
| Volume: |
20 |
| Issue: |
1 |
| Pages: |
14-28 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nishikawa A |
| Year: |
2005 |
| Journal: |
Toxicol Sci |
| Title: |
Induction of colon tumors in C57BL/6J mice fed MeIQx, IQ, or PhIP followed by dextran sulfate sodium treatment. |
| Volume: |
84 |
| Issue: |
2 |
| Pages: |
243-8 |
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•
•
•
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| Publication |
| First Author: |
Lentini A |
| Year: |
2022 |
| Journal: |
Nat Commun |
| Title: |
Elastic dosage compensation by X-chromosome upregulation. |
| Volume: |
13 |
| Issue: |
1 |
| Pages: |
1854 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Dragone LL |
| Year: |
2006 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Src-like adaptor protein (SLAP) regulates B cell receptor levels in a c-Cbl-dependent manner. |
| Volume: |
103 |
| Issue: |
48 |
| Pages: |
18202-7 |
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•
•
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| First Author: |
Ruffell D |
| Year: |
2009 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
A CREB-C/EBPbeta cascade induces M2 macrophage-specific gene expression and promotes muscle injury repair. |
| Volume: |
106 |
| Issue: |
41 |
| Pages: |
17475-80 |
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•
•
•
•
•
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| Publication |
| First Author: |
Lartigue A |
| Year: |
2009 |
| Journal: |
J Immunol |
| Title: |
Critical role of TLR2 and TLR4 in autoantibody production and glomerulonephritis in lpr mutation-induced mouse lupus. |
| Volume: |
183 |
| Issue: |
10 |
| Pages: |
6207-16 |
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•
•
•
•
•
|
| Publication |
| First Author: |
Schneider A |
| Year: |
2000 |
| Journal: |
Mech Dev |
| Title: |
Targeted disruption of the Nkx3.1 gene in mice results in morphogenetic defects of minor salivary glands: parallels to glandular duct morphogenesis in prostate. |
| Volume: |
95 |
| Issue: |
1-2 |
| Pages: |
163-74 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mariño G |
| Year: |
2010 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Insulin-like growth factor 1 treatment extends longevity in a mouse model of human premature aging by restoring somatotroph axis function. |
| Volume: |
107 |
| Issue: |
37 |
| Pages: |
16268-73 |
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•
•
•
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| Publication |
| First Author: |
Zlotnik A |
| Year: |
1999 |
| Journal: |
Crit Rev Immunol |
| Title: |
Recent advances in chemokines and chemokine receptors. |
| Volume: |
19 |
| Issue: |
1 |
| Pages: |
1-47 |
|
•
•
•
•
•
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| Publication |
| First Author: |
Vambutas A |
| Year: |
1991 |
| Journal: |
Eur J Biochem |
| Title: |
Mitochondrial translational-initiation and elongation factors in Saccharomyces cerevisiae. |
| Volume: |
201 |
| Issue: |
3 |
| Pages: |
643-52 |
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•
•
•
•
•
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| Publication |
| First Author: |
Portales-Casamar E |
| Year: |
2010 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
A regulatory toolbox of MiniPromoters to drive selective expression in the brain. |
| Volume: |
107 |
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38 |
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16589-94 |
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•
•
•
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| Publication |
| First Author: |
Knebelmann B |
| Year: |
1991 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Anti-Müllerian hormone Bruxelles: a nonsense mutation associated with the persistent Müllerian duct syndrome. |
| Volume: |
88 |
| Issue: |
9 |
| Pages: |
3767-71 |
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•
•
•
•
•
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| Publication |
| First Author: |
Cho S |
| Year: |
2005 |
| Journal: |
Genomics |
| Title: |
The ribonuclease A superfamily of mammals and birds: identifying new members and tracing evolutionary histories. |
| Volume: |
85 |
| Issue: |
2 |
| Pages: |
208-20 |
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•
•
•
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| Publication |
| First Author: |
Ratzka A |
| Year: |
2011 |
| Journal: |
PLoS One |
| Title: |
FGF-2 deficiency does not influence FGF ligand and receptor expression during development of the nigrostriatal system. |
| Volume: |
6 |
| Issue: |
8 |
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e23564 |
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•
•
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| First Author: |
Zalc A |
| Year: |
2014 |
| Journal: |
Development |
| Title: |
Antagonistic regulation of p57kip2 by Hes/Hey downstream of Notch signaling and muscle regulatory factors regulates skeletal muscle growth arrest. |
| Volume: |
141 |
| Issue: |
14 |
| Pages: |
2780-90 |
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•
•
•
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| First Author: |
Talasila A |
| Year: |
2013 |
| Journal: |
Arterioscler Thromb Vasc Biol |
| Title: |
Myocardin regulates vascular response to injury through miR-24/-29a and platelet-derived growth factor receptor-β. |
| Volume: |
33 |
| Issue: |
10 |
| Pages: |
2355-65 |
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•
•
•
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| First Author: |
Cariboni A |
| Year: |
2011 |
| Journal: |
Development |
| Title: |
VEGF signalling controls GnRH neuron survival via NRP1 independently of KDR and blood vessels. |
| Volume: |
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17 |
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3723-33 |
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| First Author: |
Eda A |
| Year: |
2011 |
| Journal: |
Gene |
| Title: |
Alteration of microRNA expression in the process of mouse brain growth. |
| Volume: |
485 |
| Issue: |
1 |
| Pages: |
46-52 |
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Lammert E |
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2003 |
| Journal: |
Curr Biol |
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Role of VEGF-A in vascularization of pancreatic islets. |
| Volume: |
13 |
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12 |
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1070-4 |
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Du J |
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2021 |
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Cell Rep |
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Arid1a-Plagl1-Hh signaling is indispensable for differentiation-associated cell cycle arrest of tooth root progenitors. |
| Volume: |
35 |
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108964 |
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Sullivan TJ |
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2001 |
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Proc Natl Acad Sci U S A |
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Lack of a role for transforming growth factor-beta in cytotoxic T lymphocyte antigen-4-mediated inhibition of T cell activation. |
| Volume: |
98 |
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5 |
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2587-92 |
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Zhou D |
| Year: |
1999 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
A beta-1,3-N-acetylglucosaminyltransferase with poly-N-acetyllactosamine synthase activity is structurally related to beta-1,3-galactosyltransferases. |
| Volume: |
96 |
| Issue: |
2 |
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406-11 |
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| First Author: |
Olson JH |
| Year: |
2001 |
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Proc Natl Acad Sci U S A |
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Allurin, a 21-kDa sperm chemoattractant from Xenopus egg jelly, is related to mammalian sperm-binding proteins. |
| Volume: |
98 |
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20 |
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11205-10 |
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| First Author: |
Goth CK |
| Year: |
2015 |
| Journal: |
Proc Natl Acad Sci U S A |
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A systematic study of modulation of ADAM-mediated ectodomain shedding by site-specific O-glycosylation. |
| Volume: |
112 |
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47 |
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14623-8 |
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| First Author: |
McGreevy EM |
| Year: |
2015 |
| Journal: |
Biol Open |
| Title: |
Shroom3 functions downstream of planar cell polarity to regulate myosin II distribution and cellular organization during neural tube closure. |
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4 |
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2021 |
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Proc Natl Acad Sci U S A |
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Adipose tissue is a critical regulator of osteoarthritis. |
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118 |
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1 |
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| First Author: |
Cox DC |
| Year: |
2020 |
| Journal: |
Hum Mol Genet |
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Increased nuclear but not cytoplasmic activities of CELF1 protein leads to muscle wasting. |
| Volume: |
29 |
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10 |
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1729-1744 |
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•
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| First Author: |
Rorke EA |
| Year: |
2010 |
| Journal: |
Oncogene |
| Title: |
AP1 factor inactivation in the suprabasal epidermis causes increased epidermal hyperproliferation and hyperkeratosis but reduced carcinogen-dependent tumor formation. |
| Volume: |
29 |
| Issue: |
44 |
| Pages: |
5873-82 |
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| First Author: |
Sahay A |
| Year: |
2011 |
| Journal: |
Nature |
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Increasing adult hippocampal neurogenesis is sufficient to improve pattern separation. |
| Volume: |
472 |
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7344 |
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466-70 |
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•
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| First Author: |
Christou M |
| Year: |
2020 |
| Journal: |
Nucleic Acid Ther |
| Title: |
Systemic Evaluation of Chimeric LNA/2'-O-Methyl Steric Blockers for Myotonic Dystrophy Type 1 Therapy. |
| Volume: |
30 |
| Issue: |
2 |
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80-93 |
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•
•
•
•
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| Publication |
| First Author: |
Bobik TA |
| Year: |
1990 |
| Journal: |
FEMS Microbiol Rev |
| Title: |
Formyl-methanofuran synthesis in Methanobacterium thermoautotrophicum. |
| Volume: |
7 |
| Issue: |
3-4 |
| Pages: |
323-6 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Formylmethanofuran dehydrogenase () is found in methanogenic and sulphate-reducing archaea. The enzyme contains molybdenum or tungsten, a molybdopterin guanine dinuceotide cofactor (MGD) and iron-sulphur clusters []. It catalyses the reversible reduction of CO2and methanofuran via N-carboxymethanofuran (carbamate) to N-formylmethanofuran, the first and second steps in methanogenesis from CO2[, ]. This reaction is important for the reduction of CO2to methane, in autotrophic CO2fixation, and in CO2formation from reduced C1units []. The synthesis of formylmethanofuran is crucial for the energy metabolism of archaea. Methanogenic archaea derives the energy for autrophic growth from the reduction of CO2with molecular hydrogen as the electron donor []. The process of methanogenesis consists of a series of reduction reactions at which the one-carbon unit derived from CO2is bound to C1carriers.There are two isoenzymes of formylmethanofuran dehydrogenase: a tungsten-containing isoenzyme (Fwd) and a molybdenum-containing isoenzyme (Fmd). The tungsten isoenzyme is constitutively transcribed, whereas transcription of the molybdenum operon is induced by molybdate []. The archaean Methanobacterium thermoautotrophicum contains a 4-subunit (FwdA, FwdB, FwdC, FwdD) tungsten formylmethanofuran dehydrogenase and a 3-subunit (FmdA, FmdB, FmdC) molybdenum formylmethanofuran dehydrogenase [].This entry represents subunit A (FmdA and FwdA) of formylmethanofuran dehydrogenases. The other subunits are subunit B (), subunit C (), subunit D (), subunit E (), and subunit F. Some organisms also encode a fusion of the C and D subunits(). Members of this entry share sequence similarity with the two highly conserved regions of dihydroorotase () (an amidohydrolase): the first is located at the N-terminal end and contains two histidine residues suggested to be involved in binding a zinc ion []; the second conserved region is at the C terminus [].In Methylobacterium extorquens, homologues of FmdA, FmdB and FmdC subunits were found and shown to copurify with a functional formyltransferase complex. However, there is no evidence that the complex catalyses the oxidation of formylmethanofuran [].Methanogenic bacteria and archea derive the energy for autotrophic growth from methanogenesis, the reduction of CO2 with molecular hydrogen as the electron donor. FMDH catalyzes the first step in methanogenesis, the formyl-methanofuran synthesis. In this step, CO2 is bound to methanofuran and subsequently reduced to the formyl state with electrons derived from hydrogen [, ]. |
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•
•
•
•
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| Publication |
| First Author: |
Meguro F |
| Year: |
2019 |
| Journal: |
Gene Expr Patterns |
| Title: |
Bmp signaling in molar cusp formation. |
| Volume: |
32 |
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67-71 |
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•
•
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| Publication |
| First Author: |
Eltokhi A |
| Year: |
2020 |
| Journal: |
Int J Mol Sci |
| Title: |
Glutamatergic Dysfunction and Synaptic Ultrastructural Alterations in Schizophrenia and Autism Spectrum Disorder: Evidence from Human and Rodent Studies. |
| Volume: |
22 |
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1 |
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•
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| First Author: |
Procaccini C |
| Year: |
2010 |
| Journal: |
Immunity |
| Title: |
An oscillatory switch in mTOR kinase activity sets regulatory T cell responsiveness. |
| Volume: |
33 |
| Issue: |
6 |
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929-41 |
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•
•
•
•
•
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| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Fernandes KA |
| Year: |
2018 |
| Journal: |
Exp Eye Res |
| Title: |
Role of SARM1 and DR6 in retinal ganglion cell axonal and somal degeneration following axonal injury. |
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171 |
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•
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| First Author: |
Borroto A |
| Year: |
2022 |
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Front Immunol |
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Mutation of the Polyproline Sequence in CD3ε Evidences TCR Signaling Requirements for Differentiation and Function of Pro-Inflammatory Tγδ17 Cells. |
| Volume: |
13 |
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799919 |
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•
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| First Author: |
Mukhopadhyay A |
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2011 |
| Journal: |
J Invest Dermatol |
| Title: |
Activated Kras alters epidermal homeostasis of mouse skin, resulting in redundant skin and defective hair cycling. |
| Volume: |
131 |
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•
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Luo D |
| Year: |
2017 |
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Proc Natl Acad Sci U S A |
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Deltex2 represses MyoD expression and inhibits myogenic differentiation by acting as a negative regulator of Jmjd1c. |
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E3071-E3080 |
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Mylona A |
| Year: |
2011 |
| Journal: |
Mol Cell Biol |
| Title: |
The essential function for serum response factor in T-cell development reflects its specific coupling to extracellular signal-regulated kinase signaling. |
| Volume: |
31 |
| Issue: |
2 |
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267-76 |
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•
•
•
•
•
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| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
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•
•
•
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| Publication |
| First Author: |
Horwitz E |
| Year: |
2018 |
| Journal: |
Diabetes |
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β-Cell DNA Damage Response Promotes Islet Inflammation in Type 1 Diabetes. |
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67 |
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11 |
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2305-2318 |
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•
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Kato A |
| Year: |
2003 |
| Journal: |
Hepatology |
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Endogenous IL-13 protects hepatocytes and vascular endothelial cells during ischemia/reperfusion injury. |
| Volume: |
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2 |
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Louvi A |
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2004 |
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Development |
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Presenilin 1 in migration and morphogenesis in the central nervous system. |
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13 |
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Larochelle A |
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2015 |
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Brain Behav Immun |
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Role of adaptor protein MyD88 in TLR-mediated preconditioning and neuroprotection after acute excitotoxicity. |
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46 |
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Czechanski A |
| Year: |
2015 |
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Dev Biol |
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Kif18a is specifically required for mitotic progression during germ line development. |
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