| Type |
Details |
Score |
| Publication |
| First Author: |
Bao X |
| Year: |
2010 |
| Journal: |
Immunity |
| Title: |
Endothelial heparan sulfate controls chemokine presentation in recruitment of lymphocytes and dendritic cells to lymph nodes. |
| Volume: |
33 |
| Issue: |
5 |
| Pages: |
817-29 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Belilos A |
| Year: |
2023 |
| Journal: |
Cell Rep |
| Title: |
Nucleus accumbens local circuit for cue-dependent aversive learning. |
| Volume: |
42 |
| Issue: |
12 |
| Pages: |
113488 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Van Pel A |
| Year: |
2001 |
| Journal: |
Cancer Immunol Immunother |
| Title: |
Induction of cytolytic T lymphocytes by immunization of mice with an adenovirus containing a mouse homolog of the human MAGE-A genes. |
| Volume: |
49 |
| Issue: |
11 |
| Pages: |
593-602 |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Mfsd12/Mfsd12 |
| Background: |
involves: A * STOCK fz |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kirabo A |
| Year: |
2011 |
| Journal: |
J Mol Cell Cardiol |
| Title: |
Vascular smooth muscle Jak2 deletion prevents angiotensin II-mediated neointima formation following injury in mice. |
| Volume: |
50 |
| Issue: |
6 |
| Pages: |
1026-34 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kamijo A |
| Year: |
2016 |
| Journal: |
Histochem Cell Biol |
| Title: |
Immunohistochemical study of the membrane skeletal protein, membrane protein palmitoylated 6 (MPP6), in the mouse small intestine. |
| Volume: |
145 |
| Issue: |
1 |
| Pages: |
81-92 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lee K |
| Year: |
2022 |
| Journal: |
Diabetologia |
| Title: |
XBP1 maintains beta cell identity, represses beta-to-alpha cell transdifferentiation and protects against diabetic beta cell failure during metabolic stress in mice. |
| Volume: |
65 |
| Issue: |
6 |
| Pages: |
984-996 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bahat A |
| Year: |
2018 |
| Journal: |
Nat Commun |
| Title: |
MTCH2-mediated mitochondrial fusion drives exit from naïve pluripotency in embryonic stem cells. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
5132 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Cope DW |
| Year: |
2004 |
| Journal: |
Neuropharmacology |
| Title: |
Abolition of zolpidem sensitivity in mice with a point mutation in the GABAA receptor gamma2 subunit. |
| Volume: |
47 |
| Issue: |
1 |
| Pages: |
17-34 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Parlakian A |
| Year: |
2004 |
| Journal: |
Mol Cell Biol |
| Title: |
Targeted inactivation of serum response factor in the developing heart results in myocardial defects and embryonic lethality. |
| Volume: |
24 |
| Issue: |
12 |
| Pages: |
5281-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tsutiya A |
| Year: |
2015 |
| Journal: |
Eur J Neurosci |
| Title: |
Mouse pups lacking collapsin response mediator protein 4 manifest impaired olfactory function and hyperactivity in the olfactory bulb. |
| Volume: |
42 |
| Issue: |
6 |
| Pages: |
2335-45 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
DNA replication in eukaryotes results from a highly coordinated interaction between proteins, often as part of protein complexes, and the DNA template. One of the key early steps leading to DNA replication is formation of the pre-replication complex, or pre-RC. The pre-RC is formed by the sequential binding of the origin recognition complex (ORC), Cdc6 and Cdt1 proteins, and the MCM complex. Activation of the pre-RC into the initiation complex (IC) is achieved via the action of S-phase kinases, eventually leading to the loading of the replication machinery.Recently, a novel replication complex, GINS (for Go, Ichi, Nii, and San; five, one, two, and three in Japanese), has been identified [, ]. The precise function of GINS is not known. However, genetic and two-hybrid interactions indicate that it mediates the loading of the enzymatic replication machinery at a step after the action of the S-phase kinases []. Furthermore, GINS may be a part of the replication machinery itself, since it is found associated with replicating DNA [, ]. Electron microscopy of GINS shows that it forms a ring-like structure [], reminiscent of the structure of PCNA [], the DNA polymerase delta replication clamp. This observation, coupled with the observed interactions for GINS, indicates that the complex may represent the replication clamp for DNA polymerase epsilon [].The GINS complex is essential for initiation of DNA replication in Xenopus egg extracts []. This 100kDa stable complex includes Sld5, Psf1, Psf2, and Psf3. Homologues of these components are found also in other eukaryotes []. The archaeal GINS complex contains two subunits (SSO0772/gins23 and SO1049/gins15 in Sulfolobus) that are poorly conserved homologues of the eukaryotic GINS subunits []. Only Gins23 is included in this entry.The eukaryotic GINS subunits are homologous. The four subunits of the complex consist of two domains each, termed the α-helical (A) and β-strand (B) domains. The A and B domains of Sld5/Psf1 are permuted with respect to Psf1/Psf3 []. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lozovska A |
| Year: |
2024 |
| Journal: |
Nat Commun |
| Title: |
Tgfbr1 controls developmental plasticity between the hindlimb and external genitalia by remodeling their regulatory landscape. |
| Volume: |
15 |
| Issue: |
1 |
| Pages: |
2509 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Nathan A |
| Year: |
2017 |
| Journal: |
Hum Mol Genet |
| Title: |
The Wilms tumor protein Wt1 contributes to female fertility by regulating oviductal proteostasis. |
| Volume: |
26 |
| Issue: |
9 |
| Pages: |
1694-1705 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Calcinotto A |
| Year: |
2012 |
| Journal: |
J Immunol |
| Title: |
Targeting TNF-α to neoangiogenic vessels enhances lymphocyte infiltration in tumors and increases the therapeutic potential of immunotherapy. |
| Volume: |
188 |
| Issue: |
6 |
| Pages: |
2687-94 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Amarnani A |
| Year: |
2024 |
| Journal: |
Front Immunol |
| Title: |
Mitf regulates gene expression networks implicated in B cell homeostasis, germinal center responses, and tolerance. |
| Volume: |
15 |
|
| Pages: |
1339325 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Rothe M |
| Year: |
1996 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
I-TRAF is a novel TRAF-interacting protein that regulates TRAF-mediated signal transduction. |
| Volume: |
93 |
| Issue: |
16 |
| Pages: |
8241-6 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kim S |
| Year: |
2007 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
A mouse model of conditional lipodystrophy. |
| Volume: |
104 |
| Issue: |
42 |
| Pages: |
16627-32 |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Seoane M |
| Year: |
2011 |
| Journal: |
PLoS One |
| Title: |
The mitochondrial genome is a "genetic sanctuary" during the oncogenic process. |
| Volume: |
6 |
| Issue: |
8 |
| Pages: |
e23327 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lundgren K |
| Year: |
1997 |
| Journal: |
Genes Dev |
| Title: |
Targeted expression of MDM2 uncouples S phase from mitosis and inhibits mammary gland development independent of p53. |
| Volume: |
11 |
| Issue: |
6 |
| Pages: |
714-25 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Reagan A |
| Year: |
2016 |
| Journal: |
Adv Exp Med Biol |
| Title: |
Retinal Caveolin-1 Modulates Neuroprotective Signaling. |
| Volume: |
854 |
|
| Pages: |
411-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Dubin G |
| Year: |
2003 |
| Journal: |
Biochemistry |
| Title: |
A novel class of cysteine protease inhibitors: solution structure of staphostatin A from Staphylococcus aureus. |
| Volume: |
42 |
| Issue: |
46 |
| Pages: |
13449-56 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ramirez-Martinez A |
| Year: |
2021 |
| Journal: |
Nat Commun |
| Title: |
The nuclear envelope protein Net39 is essential for muscle nuclear integrity and chromatin organization. |
| Volume: |
12 |
| Issue: |
1 |
| Pages: |
690 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mohand-Said S |
| Year: |
1998 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Normal retina releases a diffusible factor stimulating cone survival in the retinal degeneration mouse. |
| Volume: |
95 |
| Issue: |
14 |
| Pages: |
8357-62 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Rossi F |
| Year: |
2006 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Oncogenic Kit signaling and therapeutic intervention in a mouse model of gastrointestinal stromal tumor. |
| Volume: |
103 |
| Issue: |
34 |
| Pages: |
12843-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
VacÃk T |
| Year: |
2005 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Segmental trisomy of chromosome 17: a mouse model of human aneuploidy syndromes. |
| Volume: |
102 |
| Issue: |
12 |
| Pages: |
4500-5 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jaworski A |
| Year: |
2015 |
| Journal: |
Science |
| Title: |
Operational redundancy in axon guidance through the multifunctional receptor Robo3 and its ligand NELL2. |
| Volume: |
350 |
| Issue: |
6263 |
| Pages: |
961-5 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Reis JL |
| Year: |
2007 |
| Journal: |
J Neurosurg |
| Title: |
In utero topographic analysis of astrocytes and neuronal cells in the spinal cord of mutant mice with myelomeningocele. |
| Volume: |
106 |
| Issue: |
6 Suppl |
| Pages: |
472-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Li HS |
| Year: |
2011 |
| Journal: |
Blood |
| Title: |
Cell-intrinsic role for IFN-α-STAT1 signals in regulating murine Peyer patch plasmacytoid dendritic cells and conditioning an inflammatory response. |
| Volume: |
118 |
| Issue: |
14 |
| Pages: |
3879-89 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Doron A |
| Year: |
2022 |
| Journal: |
Nature |
| Title: |
Hippocampal astrocytes encode reward location. |
| Volume: |
609 |
| Issue: |
7928 |
| Pages: |
772-778 |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Murai M |
| Year: |
2001 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Early postnatal ataxia and abnormal cerebellar development in mice lacking Xeroderma pigmentosum Group A and Cockayne syndrome Group B DNA repair genes. |
| Volume: |
98 |
| Issue: |
23 |
| Pages: |
13379-84 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Moumen A |
| Year: |
2005 |
| Journal: |
Cell |
| Title: |
hnRNP K: an HDM2 target and transcriptional coactivator of p53 in response to DNA damage. |
| Volume: |
123 |
| Issue: |
6 |
| Pages: |
1065-78 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Carattoli A |
| Year: |
1991 |
| Journal: |
J Biol Chem |
| Title: |
The Neurospora crassa carotenoid biosynthetic gene (albino 3) reveals highly conserved regions among prenyltransferases. |
| Volume: |
266 |
| Issue: |
9 |
| Pages: |
5854-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Webster A |
| Year: |
1997 |
| Journal: |
J Virol |
| Title: |
Role of preterminal protein processing in adenovirus replication. |
| Volume: |
71 |
| Issue: |
9 |
| Pages: |
6381-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Urbani A |
| Year: |
2001 |
| Journal: |
FEBS Lett |
| Title: |
Properties of the detergent solubilised cytochrome c oxidase (cytochrome cbb(3)) purified from Pseudomonas stutzeri. |
| Volume: |
508 |
| Issue: |
1 |
| Pages: |
29-35 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Caricasole A |
| Year: |
2000 |
| Journal: |
Biochim Biophys Acta |
| Title: |
Cloning and characterization of the human phosphoinositide-specific phospholipase C-beta 1 (PLC beta 1). |
| Volume: |
1517 |
| Issue: |
1 |
| Pages: |
63-72 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Pikis A |
| Year: |
2002 |
| Journal: |
Microbiology |
| Title: |
Metabolism of sucrose and its five isomers by Fusobacterium mortiferum. |
| Volume: |
148 |
| Issue: |
Pt 3 |
| Pages: |
843-52 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kamei A |
| Year: |
2002 |
| Journal: |
DNA Res |
| Title: |
Biochemical examination of the potential eukaryotic-type protein kinase genes in the complete genome of the unicellular Cyanobacterium synechocystis sp. PCC 6803. |
| Volume: |
9 |
| Issue: |
3 |
| Pages: |
71-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Cahill A |
| Year: |
1996 |
| Journal: |
Alcohol Clin Exp Res |
| Title: |
Differential effects of chronic ethanol consumption on hepatic mitochondrial and cytoplasmic ribosomes. |
| Volume: |
20 |
| Issue: |
8 |
| Pages: |
1362-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Markkula A |
| Year: |
2012 |
| Journal: |
Appl Environ Microbiol |
| Title: |
Roles of four putative DEAD-box RNA helicase genes in growth of Listeria monocytogenes EGD-e under heat, pH, osmotic, ethanol, and oxidative stress conditions. |
| Volume: |
78 |
| Issue: |
19 |
| Pages: |
6875-82 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Markkula A |
| Year: |
2012 |
| Journal: |
Environ Microbiol |
| Title: |
Genes encoding putative DEAD-box RNA helicases in Listeria monocytogenes EGD-e are needed for growth and motility at 3°C. |
| Volume: |
14 |
| Issue: |
8 |
| Pages: |
2223-32 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Vit A |
| Year: |
2015 |
| Journal: |
Chembiochem |
| Title: |
Ergothioneine biosynthetic methyltransferase EgtD reveals the structural basis of aromatic amino acid betaine biosynthesis. |
| Volume: |
16 |
| Issue: |
1 |
| Pages: |
119-25 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Vit A |
| Year: |
2015 |
| Journal: |
Chembiochem |
| Title: |
Structure of the Ergothioneine-Biosynthesis Amidohydrolase EgtC. |
| Volume: |
16 |
| Issue: |
10 |
| Pages: |
1490-6 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gaugel A |
| Year: |
2012 |
| Journal: |
J Mol Signal |
| Title: |
Defining regulatory and phosphoinositide-binding sites in the human WIPI-1 β-propeller responsible for autophagosomal membrane localization downstream of mTORC1 inhibition. |
| Volume: |
7 |
| Issue: |
1 |
| Pages: |
16 |
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•
•
•
•
•
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| Publication |
| First Author: |
Zamorano A |
| Year: |
2003 |
| Journal: |
J Neurosci Res |
| Title: |
Transcriptionally mediated gene targeting of gas1 to glioma cells elicits growth arrest and apoptosis. |
| Volume: |
71 |
| Issue: |
2 |
| Pages: |
256-63 |
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•
•
•
•
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| Publication |
| First Author: |
Geisinger A |
| Year: |
2005 |
| Journal: |
Biochim Biophys Acta |
| Title: |
The mammalian gene pecanex 1 is differentially expressed during spermatogenesis. |
| Volume: |
1728 |
| Issue: |
1-2 |
| Pages: |
34-43 |
|
•
•
•
•
•
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| Publication |
| First Author: |
Baxter-Burrell A |
| Year: |
2002 |
| Journal: |
Science |
| Title: |
RopGAP4-dependent Rop GTPase rheostat control of Arabidopsis oxygen deprivation tolerance. |
| Volume: |
296 |
| Issue: |
5575 |
| Pages: |
2026-8 |
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•
•
•
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| Publication |
| First Author: |
Söderholm A |
| Year: |
2020 |
| Journal: |
J Biol Chem |
| Title: |
Structure and kinetics of indole-3-glycerol phosphate synthase from Pseudomonas aeruginosa: Decarboxylation is not essential for indole formation. |
| Volume: |
295 |
| Issue: |
47 |
| Pages: |
15948-15956 |
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•
•
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| Publication |
| First Author: |
Vera E |
| Year: |
2012 |
| Journal: |
Cell Rep |
| Title: |
The rate of increase of short telomeres predicts longevity in mammals. |
| Volume: |
2 |
| Issue: |
4 |
| Pages: |
732-7 |
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•
•
•
•
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| Publication |
| First Author: |
Marcoe JP |
| Year: |
2012 |
| Journal: |
Nat Immunol |
| Title: |
TGF-β is responsible for NK cell immaturity during ontogeny and increased susceptibility to infection during mouse infancy. |
| Volume: |
13 |
| Issue: |
9 |
| Pages: |
843-50 |
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•
•
•
•
•
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| Publication |
| First Author: |
Alikhan MA |
| Year: |
2011 |
| Journal: |
Am J Pathol |
| Title: |
Colony-stimulating factor-1 promotes kidney growth and repair via alteration of macrophage responses. |
| Volume: |
179 |
| Issue: |
3 |
| Pages: |
1243-56 |
|
•
•
•
•
•
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| Publication |
| First Author: |
Drenan RM |
| Year: |
2008 |
| Journal: |
Neuron |
| Title: |
In vivo activation of midbrain dopamine neurons via sensitized, high-affinity alpha 6 nicotinic acetylcholine receptors. |
| Volume: |
60 |
| Issue: |
1 |
| Pages: |
123-36 |
|
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•
•
•
•
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| Publication |
| First Author: |
Laouar Y |
| Year: |
2005 |
| Journal: |
Nat Immunol |
| Title: |
Transforming growth factor-beta controls T helper type 1 cell development through regulation of natural killer cell interferon-gamma. |
| Volume: |
6 |
| Issue: |
6 |
| Pages: |
600-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Schneeberger K |
| Year: |
2015 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
An inducible mouse model for microvillus inclusion disease reveals a role for myosin Vb in apical and basolateral trafficking. |
| Volume: |
112 |
| Issue: |
40 |
| Pages: |
12408-13 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Delhase M |
| Year: |
2012 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
TANK-binding kinase 1 (TBK1) controls cell survival through PAI-2/serpinB2 and transglutaminase 2. |
| Volume: |
109 |
| Issue: |
4 |
| Pages: |
E177-86 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Logeswaran A |
| Year: |
2021 |
| Journal: |
Front Immunol |
| Title: |
Conjunctival Goblet Cell Responses to TLR5 Engagement Promote Activation of Local Antigen-Presenting Cells. |
| Volume: |
12 |
|
| Pages: |
716939 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Azoulay A |
| Year: |
1994 |
| Journal: |
J Virol |
| Title: |
FVB mice transgenic for the H-2Db gene become resistant to persistent infection by Theiler's virus. |
| Volume: |
68 |
| Issue: |
6 |
| Pages: |
4049-52 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ruiz de Azua I |
| Year: |
2010 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
RGS4 is a negative regulator of insulin release from pancreatic beta-cells in vitro and in vivo. |
| Volume: |
107 |
| Issue: |
17 |
| Pages: |
7999-8004 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
187
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
166
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
209
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
155
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
64
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
111
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
70
 |
| Fragment?: |
false |
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•
•
•
•
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| Publication |
| First Author: |
Sutton TC |
| Year: |
2017 |
| Journal: |
NPJ Vaccines |
| Title: |
Protective efficacy of influenza group 2 hemagglutinin stem-fragment immunogen vaccines. |
| Volume: |
2 |
|
| Pages: |
35 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wu Y |
| Year: |
2014 |
| Journal: |
Trends Microbiol |
| Title: |
Bat-derived influenza-like viruses H17N10 and H18N11. |
| Volume: |
22 |
| Issue: |
4 |
| Pages: |
183-91 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ma J |
| Year: |
2015 |
| Journal: |
Mol Neurobiol |
| Title: |
MS4A Cluster in Alzheimer's Disease. |
| Volume: |
51 |
| Issue: |
3 |
| Pages: |
1240-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Vanhooren JC |
| Year: |
1996 |
| Journal: |
Eur J Biochem |
| Title: |
Rat pristanoyl-CoA oxidase. cDNA cloning and recognition of its C-terminal (SQL) by the peroxisomal-targeting signal 1 receptor. |
| Volume: |
239 |
| Issue: |
2 |
| Pages: |
302-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Baumgart E |
| Year: |
1996 |
| Journal: |
Biochem J |
| Title: |
Molecular cloning and further characterization of rat peroxisomal trihydroxycoprostanoyl-CoA oxidase. |
| Volume: |
320 ( Pt 1) |
|
| Pages: |
115-21 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Haemagglutinin (HA) is one of two main surface fusion glycoproteins embedded in the envelope of influenza viruses, the other being neuraminidase (NA). There are sixteen known HA subtypes (H1-H16) and nine NA subtypes (N1-N9), which together are used to classify influenza viruses (e.g. H5N1). The antigenic variations in HA and NA enable the virus to evade host antibodies made to previous influenza strains, accounting for recurrent influenza epidemics []. The HA glycoprotein is present in the viral membrane as a single polypeptide (HA0), which must be cleaved by the host's trypsin-like proteases to produce two peptides (HA1 and HA2) in order for the virus to be infectious. Once HA0 is cleaved, the newly exposed N-terminal of the HA2 peptide then acts to fuse the viral envelope to the cellular membrane of the host cell, which allows the viral negative-stranded RNA to infect the host cell. The type of host protease can influence the infectivity and pathogenicity of the virus.The haemagglutinin glycoprotein is a trimer containing three structurally distinct regions: a globular head consisting of anti-parallel β-sheets that form a β-sandwich with a jelly-roll fold (contains the receptor binding site and the HA1/HA2 cleavage site); a triple-stranded, coiled-coil, α-helical stalk; and a globular foot composed of anti-parallel β-sheets [, ]. Each monomer consists of an intact HA0 polypeptide with the HA1 and HA2 regions linked by disulphide bonds. The N terminus of HA1 provides the central strand in the 5-stranded globular foot, while the rest of the HA1 chain makes its way to the 8-stranded globular head. HA2 provides two alpha helices, which form part of the triple-stranded coiled-coil that stabilises the trimer, its C terminus providing the remaining strands of the 5-stranded globular foot.This entry represents haemagglutinin from influenza virus A. The influenza A HAs can be divided into group 1 encompassing H1, H2, H5, H6, H8, H9, H11, H12, H13, H16, H17, and H18, and group 2 including H3, H4, H7, H10, H14, and H15 subtypes []. This entry also includes HA from Bat-derived influenza-like viruses H17N10 () []. |
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•
•
•
•
•
|
| Protein Domain |
| Type: |
Homologous_superfamily |
| Description: |
Quinolinate synthetase catalyses the second step of the de novobiosynthetic pathway of pyridine nucleotide formation. In particular, quinolinate synthetase is involved in the condensation of dihydroxyacetone phosphate and iminoaspartate to form quinolinic acid []. This synthesis requires two enzymes, an FAD-containing "B protein"and an "A protein". B protein converts L-aspartate to iminoaspartate. The A protein, NadA, converts iminoaspartate to quinolate. NadA harbours a [4Fe-4S]cluster []. The structure of NadA is composed of three similar domains related by pseudo threefold symmetry. Each domain has three layers (alpha/beta/alpha) with parallel beta sheet. |
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•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Peroxisomal acyl-CoA oxidases (ACO) catalyze the first set in the peroxisomal fatty acid beta-oxidation, the alpha,beta dehydrogenation of the corresponding trans-enoyl-CoA by FAD, which becomes reduced. In a second oxidative half-reaction, the reduced FAD is reoxidized by molecular oxygen. ACO is generally a homodimer. There are several subtypes of AXO's, based on substrate specificity. Palmitoyl-CoA oxidase (ACOX1) acts on straight-chain fatty acids and prostanoids [, ]; whereas, the closely related Trihydroxycoprostanoly-CoA oxidase (ACOX2) has the greatest activity for 2-methyl branched side chains of bile precursors []. Pristanoyl-CoA oxidase (ACOX3), acts on 2-methyl branched fatty acids [, ]. |
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•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
G protein-coupled receptors (GPCRs) constitute a vast protein family that encompasses a wide range of functions, including various autocrine, paracrine and endocrine processes. They show considerable diversity at the sequence level, on the basis of which they can be separated into distinct groups []. The term clan can be used to describe the GPCRs, as they embrace a group of families for which there are indications of evolutionary relationship, but between which there is no statistically significant similarity in sequence []. The currently known clan members include rhodopsin-like GPCRs (Class A, GPCRA), secretin-like GPCRs (Class B, GPCRB), metabotropic glutamate receptor family (Class C, GPCRC), fungal mating pheromone receptors (Class D, GPCRD), cAMP receptors (Class E, GPCRE) and frizzled/smoothened (Class F, GPCRF) [, , , , ]. GPCRs are major drug targets, and are consequently the subject of considerable research interest. It has been reported that the repertoire of GPCRs for endogenous ligands consists of approximately 400 receptors in humans and mice []. Most GPCRs are identified on the basis of their DNA sequences, rather than the ligand they bind, those that are unmatched to known natural ligands are designated by as orphan GPCRs, or unclassified GPCRs [].The rhodopsin-like GPCRs (GPCRA) represent a widespread protein family that includes hormone, neurotransmitter and light receptors, all of which transduce extracellular signals through interaction with guanine nucleotide-binding (G) proteins. Although their activating ligands vary widely in structure and character, the amino acid sequences of the receptors are very similar and are believed to adopt a common structural framework comprising 7 transmembrane (TM) helices [, , ].Cholecystokinins (CCKs) and gastrins are naturally-occurring peptides that share a common C-terminal sequence, GWMDF; full biological activity resides in this region. In the periphery, the principal physiological actions of CCK include gall bladder contraction, pancreatic enzyme secretion and regulation of secretion/absorption in the gastrointestinal tract. In the CNS, CCK induces analgesia, satiety and a decrease in exploratory behaviour. In mesolimbic andmesocortical neurons, CCK coexists with dopamine. It is found throughout the digestive tract, with high concentrations in the duodenum and jejunum. It is also found in peripheral nerves to other smooth muscles and to secretory glands, and is one of the most abundant peptides in the brain. The highest levels of the CCKA receptor are found in peripheral tissues, notably the pancreas, stomach, intestine and gall bladder. It has only a limited distribution in the brain. The receptor has been implicated in the pathogenesis of schizophrenia, Parkinson's disease, drug addiction and feeding disorders. |
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•
•
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| Protein Domain |
| Type: |
Family |
| Description: |
Membrane-spanning four-domains subfamily A (MS4A) includes B-cell-specific antigen CD20 (MS4A1), high affinity immunoglobulin epsilon receptor beta chain (MS4A2), hematopoietic-cell-specific protein HTm4 (MS4A3), and related proteins. These proteins share a similar structure with four transmembrane domains and have amino acid identities of 25-40% []. They are predominantly expressed in hematopoietic cells, but some can be found in other tissues including testis and brain [, ].MS4A1 (B-lymphocyte antigen CD20) [], MS4A2 (high affinity IgE receptor subunit beta) [, ], and MS4A4B []have been shown to have an important role in immunity.Several variants within the MS4A gene cluster have been implicated in Alzheimer's disease []. |
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| Publication |
| First Author: |
Ramshekar A |
| Year: |
2022 |
| Journal: |
Biomedicines |
| Title: |
Role of Erythropoietin Receptor Signaling in Macrophages or Choroidal Endothelial Cells in Choroidal Neovascularization. |
| Volume: |
10 |
| Issue: |
7 |
|
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•
•
•
•
•
|
| Publication |
| First Author: |
Hains DS |
| Year: |
2010 |
| Journal: |
J Urol |
| Title: |
High incidence of vesicoureteral reflux in mice with Fgfr2 deletion in kidney mesenchyma. |
| Volume: |
183 |
| Issue: |
5 |
| Pages: |
2077-84 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Miyake A |
| Year: |
1999 |
| Journal: |
J Biol Chem |
| Title: |
New ether-Ã -go-go K(+) channel family members localized in human telencephalon. |
| Volume: |
274 |
| Issue: |
35 |
| Pages: |
25018-25 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Golden EJ |
| Year: |
2015 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
The RNA-binding protein LIN28B regulates developmental timing in the mammalian cochlea. |
| Volume: |
112 |
| Issue: |
29 |
| Pages: |
E3864-73 |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bengsch F |
| Year: |
2017 |
| Journal: |
Cancer Immunol Immunother |
| Title: |
CTLA-4/CD80 pathway regulates T cell infiltration into pancreatic cancer. |
| Volume: |
66 |
| Issue: |
12 |
| Pages: |
1609-1617 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kawakami Y |
| Year: |
2015 |
| Journal: |
J Bone Miner Res |
| Title: |
SDF-1/CXCR4 axis in Tie2-lineage cells including endothelial progenitor cells contributes to bone fracture healing. |
| Volume: |
30 |
| Issue: |
1 |
| Pages: |
95-105 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gabdulkhakova A |
| Year: |
2023 |
| Journal: |
Hepatol Commun |
| Title: |
Loss of TAZ after YAP deletion severely impairs foregut development and worsens cholestatic hepatocellular injury. |
| Volume: |
7 |
| Issue: |
9 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Matoso A |
| Year: |
2008 |
| Journal: |
Carcinogenesis |
| Title: |
Cell lineage-specific interactions between Men1 and Rb in neuroendocrine neoplasia. |
| Volume: |
29 |
| Issue: |
3 |
| Pages: |
620-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Li M |
| Year: |
1996 |
| Journal: |
Cell Growth Differ |
| Title: |
Apoptosis and remodeling of mammary gland tissue during involution proceeds through p53-independent pathways. |
| Volume: |
7 |
| Issue: |
1 |
| Pages: |
13-20 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Aspatwar A |
| Year: |
2013 |
| Journal: |
J Enzyme Inhib Med Chem |
| Title: |
An update on carbonic anhydrase-related proteins VIII, X and XI. |
| Volume: |
28 |
| Issue: |
6 |
| Pages: |
1129-42 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Strasser A |
| Year: |
1996 |
| Journal: |
EMBO J |
| Title: |
Progenitor tumours from Emu-bcl-2-myc transgenic mice have lymphomyeloid differentiation potential and reveal developmental differences in cell survival. |
| Volume: |
15 |
| Issue: |
15 |
| Pages: |
3823-34 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Strasser A |
| Year: |
1990 |
| Journal: |
Nature |
| Title: |
Novel primitive lymphoid tumours induced in transgenic mice by cooperation between myc and bcl-2. |
| Volume: |
348 |
| Issue: |
6299 |
| Pages: |
331-3 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Rudchenko A |
| Year: |
2014 |
| Journal: |
J Neurosci |
| Title: |
Synapses on sympathetic neurons and parasympathetic neurons differ in their vulnerability to diabetes. |
| Volume: |
34 |
| Issue: |
26 |
| Pages: |
8865-74 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Harada N |
| Year: |
1990 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Expression cloning of a cDNA encoding the murine interleukin 4 receptor based on ligand binding. |
| Volume: |
87 |
| Issue: |
3 |
| Pages: |
857-61 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Drayton DL |
| Year: |
2003 |
| Journal: |
J Exp Med |
| Title: |
Ectopic LT alpha beta directs lymphoid organ neogenesis with concomitant expression of peripheral node addressin and a HEV-restricted sulfotransferase. |
| Volume: |
197 |
| Issue: |
9 |
| Pages: |
1153-63 |
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•
•
•
•
•
|
| Publication |
| First Author: |
Vassilopoulos A |
| Year: |
2015 |
| Journal: |
Oncogene |
| Title: |
WEE1 murine deficiency induces hyper-activation of APC/C and results in genomic instability and carcinogenesis. |
| Volume: |
34 |
| Issue: |
23 |
| Pages: |
3023-35 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Suzuki A |
| Year: |
2010 |
| Journal: |
J Immunol |
| Title: |
Polycomb group gene product Ring1B regulates Th2-driven airway inflammation through the inhibition of Bim-mediated apoptosis of effector Th2 cells in the lung. |
| Volume: |
184 |
| Issue: |
8 |
| Pages: |
4510-20 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Keßler M |
| Year: |
2018 |
| Journal: |
Neuromuscul Disord |
| Title: |
A zebrafish model for FHL1-opathy reveals loss-of-function effects of human FHL1 mutations. |
| Volume: |
28 |
| Issue: |
6 |
| Pages: |
521-531 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lesaffer B |
| Year: |
2019 |
| Journal: |
Cells |
| Title: |
Comparison of the Opn-CreER and Ck19-CreER Drivers in Bile Ducts of Normal and Injured Mouse Livers. |
| Volume: |
8 |
| Issue: |
4 |
|
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•
•
•
•
•
|
| Publication |
| First Author: |
Patel A |
| Year: |
2009 |
| Journal: |
J Biol Chem |
| Title: |
On the mechanism of multiple lysine methylation by the human mixed lineage leukemia protein-1 (MLL1) core complex. |
| Volume: |
284 |
| Issue: |
36 |
| Pages: |
24242-56 |
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•
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