Type |
Details |
Score |
Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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•
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Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
2022 |
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Title: |
Cyagen Biosciences Website. |
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•
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•
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Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
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Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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•
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Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
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•
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Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
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Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
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•
•
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Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
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•
•
•
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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•
•
•
•
•
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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•
•
•
•
•
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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•
•
•
•
•
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Publication |
First Author: |
Hoj JP |
Year: |
2020 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
The ABL2 kinase regulates an HSF1-dependent transcriptional program required for lung adenocarcinoma brain metastasis. |
Volume: |
117 |
Issue: |
52 |
Pages: |
33486-33495 |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
2 |
Description: |
Tyrosine-protein kinase ABL2 |
Type: |
chain |
End: |
1182 |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
34 |
Description: |
Phosphotyrosine; by ABL2 |
Type: |
modified residue |
End: |
34 |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
34 |
Description: |
Phosphotyrosine; by ABL2 |
Type: |
modified residue |
End: |
34 |
|
•
•
•
•
•
|
Allele |
Name: |
ABL proto-oncogene 2, non-receptor tyrosine kinase; targeted mutation 1c, Helmholtz Zentrum Muenchen GmbH |
Allele Type: |
Targeted |
Attribute String: |
Conditional ready |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
269
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1182
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Hernández SE |
Year: |
2004 |
Journal: |
Trends Cell Biol |
Title: |
How do Abl family kinases regulate cell shape and movement? |
Volume: |
14 |
Issue: |
1 |
Pages: |
36-44 |
|
•
•
•
•
•
|
Publication |
First Author: |
Boyle SN |
Year: |
2007 |
Journal: |
Biochemistry |
Title: |
Use of a chemical genetic technique to identify myosin IIb as a substrate of the Abl-related gene (Arg) tyrosine kinase. |
Volume: |
46 |
Issue: |
41 |
Pages: |
11614-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Backert S |
Year: |
2008 |
Journal: |
Trends Biochem Sci |
Title: |
Emerging roles of Abl family tyrosine kinases in microbial pathogenesis. |
Volume: |
33 |
Issue: |
2 |
Pages: |
80-90 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
139
 |
Fragment?: |
true |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
685 |
Description: |
Phosphotyrosine; by ABL1 and ABL2 |
Type: |
modified residue |
End: |
685 |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
933 |
Description: |
Phosphotyrosine; by ABL1 and ABL2 |
Type: |
modified residue |
End: |
933 |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
969 |
Description: |
Phosphotyrosine; by ABL1 and ABL2 |
Type: |
modified residue |
End: |
969 |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
153 |
Description: |
Phosphotyrosine; by ABL1 and ABL2 |
Type: |
modified residue |
End: |
153 |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
1105 |
Description: |
Phosphotyrosine; by ABL2 and PTK6 |
Type: |
modified residue |
End: |
1105 |
|
•
•
•
•
•
|
UniProt Feature |
Begin: |
35 |
Description: |
Phosphotyrosine; by ABL1 and ABL2 |
Type: |
modified residue |
End: |
35 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bradley WD |
Year: |
2006 |
Journal: |
Mol Biol Cell |
Title: |
Integrin signaling through Arg activates p190RhoGAP by promoting its binding to p120RasGAP and recruitment to the membrane. |
Volume: |
17 |
Issue: |
11 |
Pages: |
4827-36 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7282079 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2022-06-03 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3291617 |
Pattern: |
Regionally restricted |
Stage: |
TS17 |
Assay Id: |
MGI:7282098 |
Age: |
embryonic day 10.25 |
|
Note: |
Expression in neuroepithelium of dorsolateral rhombencephalon. Significant colocalization with Abl2 at apical surface of neuroepithelium. |
Specimen Label: |
7C Abl |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
Publication |
First Author: |
Colicelli J |
Year: |
2010 |
Journal: |
Sci Signal |
Title: |
ABL tyrosine kinases: evolution of function, regulation, and specificity. |
Volume: |
3 |
Issue: |
139 |
Pages: |
re6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Woodring PJ |
Year: |
2003 |
Journal: |
J Cell Sci |
Title: |
Regulation of F-actin-dependent processes by the Abl family of tyrosine kinases. |
Volume: |
116 |
Issue: |
Pt 13 |
Pages: |
2613-26 |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion HV66, GENSAT Project at Rockefeller University |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant stock, transgenic |
|
•
•
•
•
•
|
Publication |
First Author: |
Hoj JP |
Year: |
2019 |
Journal: |
Cell Rep |
Title: |
A TAZ-AXL-ABL2 Feed-Forward Signaling Axis Promotes Lung Adenocarcinoma Brain Metastasis. |
Volume: |
29 |
Issue: |
11 |
Pages: |
3421-3434.e8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cao X |
Year: |
2008 |
Journal: |
J Biol Chem |
Title: |
Enhancement of ABL kinase catalytic efficiency by a direct binding regulator is independent of other regulatory mechanisms. |
Volume: |
283 |
Issue: |
46 |
Pages: |
31401-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yogalingam G |
Year: |
2008 |
Journal: |
J Biol Chem |
Title: |
Abl kinases regulate autophagy by promoting the trafficking and function of lysosomal components. |
Volume: |
283 |
Issue: |
51 |
Pages: |
35941-53 |
|
•
•
•
•
•
|
Publication |
First Author: |
Groffen J |
Year: |
1983 |
Journal: |
Nature |
Title: |
Homology between phosphotyrosine acceptor site of human c-abl and viral oncogene products. |
Volume: |
304 |
Issue: |
5922 |
Pages: |
167-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sossey-Alaoui K |
Year: |
2007 |
Journal: |
J Biol Chem |
Title: |
c-Abl-mediated phosphorylation of WAVE3 is required for lamellipodia formation and cell migration. |
Volume: |
282 |
Issue: |
36 |
Pages: |
26257-65 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tanos B |
Year: |
2006 |
Journal: |
J Biol Chem |
Title: |
Abl tyrosine kinase regulates endocytosis of the epidermal growth factor receptor. |
Volume: |
281 |
Issue: |
43 |
Pages: |
32714-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dasgupta Y |
Year: |
2016 |
Journal: |
Blood |
Title: |
Normal ABL1 is a tumor suppressor and therapeutic target in human and mouse leukemias expressing oncogenic ABL1 kinases. |
Volume: |
127 |
Issue: |
17 |
Pages: |
2131-43 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry includes animal ABL1 and viral oncogene products that are homologous to ABL1 []. ABL1 plays a role in many key processes linked to cell growth and survival such as cytoskeleton remodelling in response to extracellular stimuli, cell motility and adhesion, receptor endocytosis, autophagy, DNA damage response and apoptosis [, , , ]. Normal ABL1 can serve as a tumour suppressor and therapeutic target in leukemias expressing oncogenic forms of the kinase [].ABL tyrosine kinases are nonreceptor tyrosine kinases containing an SH3-SH2-TK (Src homology 3-Src homology 2-tyrosine kinase) domain cassette, which confers autoregulated kinase activity. This cassette is coupled to an actin-binding and -bundling domain, which makes ABL proteins capable of connecting phosphoregulation with actin-filament reorganization. Two vertebrate ABL tyrosine kinases have been identified, ABL1 and ABL2 [].A downstream effector of RAS, RIN1, have been found to bind to the SH3 and SH2 domains of ABL1/ABL2 to relieve autoinhibition and regulate their activity []. |
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•
•
•
•
•
|
Publication |
First Author: |
Hardin JD |
Year: |
1996 |
Journal: |
Cell Immunol |
Title: |
Abnormal peripheral lymphocyte function in c-abl mutant mice. |
Volume: |
172 |
Issue: |
1 |
Pages: |
100-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Finn AJ |
Year: |
2003 |
Journal: |
Nat Neurosci |
Title: |
Postsynaptic requirement for Abl kinases in assembly of the neuromuscular junction. |
Volume: |
6 |
Issue: |
7 |
Pages: |
717-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu M |
Year: |
2005 |
Journal: |
Reprod Biol Endocrinol |
Title: |
Peptidylarginine deiminase (PAD) is a mouse cortical granule protein that plays a role in preimplantation embryonic development. |
Volume: |
3 |
|
Pages: |
42 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yoshida K |
Year: |
2002 |
Journal: |
Mol Cell Biol |
Title: |
c-Abl tyrosine kinase regulates the human Rad9 checkpoint protein in response to DNA damage. |
Volume: |
22 |
Issue: |
10 |
Pages: |
3292-300 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
ABL-family proteins are highly conserved tyrosine kinases. Each ABL protein contains an SH3-SH2-TK (Src homology 3-Src homology 2-tyrosine kinase) domain cassette, which confers autoregulated kinase activity and is common among nonreceptor tyrosine kinases. Several types of posttranslational modifications control ABL catalytic activity, subcellular localization, and stability, with consequences for both cytoplasmic and nuclear ABL functions. Binding partners provide additional regulation of ABL catalytic activity, substrate specificity, and downstream signaling. By combining this cassette with actin-binding and -bundling domains, ABL proteins are capable of connecting phosphoregulation with actin-filament reorganization []. Vertebrate paralogs, ABL1 and ABL2, have evolved to perform specialized functions. ABL1 includes nuclear localization signals and a DNA binding domain which is used to mediate DNA damage-repair functions, while ABL2 has additional binding capacity for actin and for microtubules to enhance its cytoskeletal remodeling functions. SH2 is involved in several autoinhibitory mechanism that constrain the enzymatic activity of the ABL-family kinases. In one mechanism SH2 and SH3 cradle the kinase domain while a cap sequence stabilizes the inactive conformation resulting in a locked inactive state. Another involves phosphatidylinositol 4,5-bisphosphate (PIP2) which binds the SH2 domain through residues normally required for phosphotyrosine binding in the linker segment between the SH2 and kinase domains. The SH2 domain contributes to ABL catalytic activity and target site specificity. It is thought that the ABL catalytic site and SH2 pocket have co-evolved to recognize the same sequences. Recent work now supports a hierarchical processivity model in which the substrate target site most compatible with ABL kinase domain preferences is phosphorylated with greatest efficiency. If this site is compatible with the ABL SH2 domain specificity, it will then reposition and dock in the SH2 pocket. This mechanism also explains how ABL kinases phosphorylates poor targets on the same substrate if they are properly positioned and how relatively poor substrate proteins might be recruited to ABL through a complex with strong substrates that can also dock with the SH2 pocket [].This entry includes the SH2 domain of ABL-family proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites [, , , ]. |
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•
•
•
•
|
Publication |
First Author: |
Kuriyan J |
Year: |
1997 |
Journal: |
Annu Rev Biophys Biomol Struct |
Title: |
Modular peptide recognition domains in eukaryotic signaling. |
Volume: |
26 |
|
Pages: |
259-88 |
|
•
•
•
•
•
|
Publication |
First Author: |
Grucza RA |
Year: |
1999 |
Journal: |
Med Res Rev |
Title: |
SH2 domains: from structure to energetics, a dual approach to the study of structure-function relationships. |
Volume: |
19 |
Issue: |
4 |
Pages: |
273-93 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kasembeli MM |
Year: |
2009 |
Journal: |
Front Biosci (Landmark Ed) |
Title: |
SH2 domain binding to phosphopeptide ligands: potential for drug targeting. |
Volume: |
14 |
|
Pages: |
1010-22 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1123
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1142
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1182
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1078
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1078
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Filippakopoulos P |
Year: |
2009 |
Journal: |
Curr Opin Struct Biol |
Title: |
SH2 domains: modulators of nonreceptor tyrosine kinase activity. |
Volume: |
19 |
Issue: |
6 |
Pages: |
643-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Trost M |
Year: |
2009 |
Journal: |
Immunity |
Title: |
The phagosomal proteome in interferon-gamma-activated macrophages. |
Volume: |
30 |
Issue: |
1 |
Pages: |
143-54 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Expression Nervous System Atlas (GENSAT) Project, The Rockefeller University (New York, NY) |
Year: |
2005 |
Journal: |
Database Download |
Title: |
MGI download of GENSAT transgene data |
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|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Huttlin EL |
Year: |
2010 |
Journal: |
Cell |
Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
Volume: |
143 |
Issue: |
7 |
Pages: |
1174-89 |
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•
•
•
•
•
|
Publication |
First Author: |
Church DM |
Year: |
2009 |
Journal: |
PLoS Biol |
Title: |
Lineage-specific biology revealed by a finished genome assembly of the mouse. |
Volume: |
7 |
Issue: |
5 |
Pages: |
e1000112 |
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•
•
•
•
•
|