Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:3506917 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Ambiguous |
Sex: |
Male |
Emaps: |
EMAPS:2850023 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539882 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12914 |
|
Specimen Label: |
GUDMAP:12914 |
|
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:2991528 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691348 |
Age: |
postnatal adult |
Image: |
JAX_1796993 |
|
Specimen Label: |
JAX_1796993 |
Detected: |
true |
Specimen Num: |
32 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1689428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691348 |
Age: |
postnatal adult |
Image: |
JAX_1797001 |
|
Specimen Label: |
JAX_1797001 |
Detected: |
true |
Specimen Num: |
40 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5001465 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3078128 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:5542019 |
Age: |
postnatal adult |
Image: |
GUDMAP:7283 |
|
Specimen Label: |
GUDMAP:7283 |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5001465 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796220 |
Pattern: |
Not Specified |
Stage: |
TS20 |
Assay Id: |
MGI:5542019 |
Age: |
embryonic day 12.5 |
Image: |
GUDMAP:7037 |
|
Specimen Label: |
GUDMAP:7037 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5001465 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:5542019 |
Age: |
postnatal adult |
Image: |
GUDMAP:7283 |
|
Specimen Label: |
GUDMAP:7283 |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3506917 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796223 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:5539882 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:12913 |
|
Specimen Label: |
GUDMAP:12913 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691348 |
Age: |
postnatal adult |
Image: |
JAX_1796998 |
|
Specimen Label: |
JAX_1796998 |
Detected: |
true |
Specimen Num: |
37 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1881228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691348 |
Age: |
postnatal adult |
Image: |
JAX_1796972 |
|
Specimen Label: |
JAX_1796972 |
Detected: |
true |
Specimen Num: |
11 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1881228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6691348 |
Age: |
postnatal adult |
Image: |
JAX_1796963 |
|
Specimen Label: |
JAX_1796963 |
Detected: |
true |
Specimen Num: |
43 |
|
•
•
•
•
•
|
Publication |
First Author: |
Herrscher RF |
Year: |
1995 |
Journal: |
Genes Dev |
Title: |
The immunoglobulin heavy-chain matrix-associating regions are bound by Bright: a B cell-specific trans-activator that describes a new DNA-binding protein family. |
Volume: |
9 |
Issue: |
24 |
Pages: |
3067-82 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nixon JC |
Year: |
2004 |
Journal: |
J Biol Chem |
Title: |
Mutations in the DNA-binding domain of the transcription factor Bright act as dominant negative proteins and interfere with immunoglobulin transactivation. |
Volume: |
279 |
Issue: |
50 |
Pages: |
52465-72 |
|
•
•
•
•
•
|
Publication |
First Author: |
Oldham AL |
Year: |
2011 |
Journal: |
Mol Immunol |
Title: |
The transcription factor Bright plays a role in marginal zone B lymphocyte development and autoantibody production. |
Volume: |
49 |
Issue: |
1-2 |
Pages: |
367-79 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shinton SA |
Year: |
2022 |
Journal: |
Sci Rep |
Title: |
Pla2g2a promotes innate Th2-type immunity lymphocytes to increase B1a cells. |
Volume: |
12 |
Issue: |
1 |
Pages: |
14899 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lin L |
Year: |
2008 |
Journal: |
Am J Pathol |
Title: |
Cross talk between Id1 and its interactive protein Dril1 mediate fibroblast responses to transforming growth factor-beta in pulmonary fibrosis. |
Volume: |
173 |
Issue: |
2 |
Pages: |
337-46 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rajaiya J |
Year: |
2005 |
Journal: |
Mol Cell Biol |
Title: |
Bruton's tyrosine kinase regulates immunoglobulin promoter activation in association with the transcription factor Bright. |
Volume: |
25 |
Issue: |
6 |
Pages: |
2073-84 |
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•
•
•
•
•
|
Publication |
First Author: |
Tidwell JA |
Year: |
2011 |
Journal: |
Mol Immunol |
Title: |
Characterization of a new ARID family transcription factor (Brightlike/ARID3C) that co-activates Bright/ARID3A-mediated immunoglobulin gene transcription. |
Volume: |
49 |
Issue: |
1-2 |
Pages: |
260-72 |
|
•
•
•
•
•
|
Publication |
First Author: |
Webb CF |
Year: |
2011 |
Journal: |
Mol Cell Biol |
Title: |
The ARID family transcription factor bright is required for both hematopoietic stem cell and B lineage development. |
Volume: |
31 |
Issue: |
5 |
Pages: |
1041-53 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gurtan AM |
Year: |
2013 |
Journal: |
Genes Dev |
Title: |
Let-7 represses Nr6a1 and a mid-gestation developmental program in adult fibroblasts. |
Volume: |
27 |
Issue: |
8 |
Pages: |
941-54 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wilsker D |
Year: |
2005 |
Journal: |
Genomics |
Title: |
Nomenclature of the ARID family of DNA-binding proteins. |
Volume: |
86 |
Issue: |
2 |
Pages: |
242-51 |
|
•
•
•
•
•
|
Publication |
First Author: |
Renaux E |
Year: |
2024 |
Journal: |
Front Cell Neurosci |
Title: |
Arid3c identifies an uncharacterized subpopulation of V2 interneurons during embryonic spinal cord development. |
Volume: |
18 |
|
Pages: |
1466056 |
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•
•
•
•
•
|
Publication |
First Author: |
Phua YL |
Year: |
2015 |
Journal: |
Physiol Rep |
Title: |
Renal stromal miRNAs are required for normal nephrogenesis and glomerular mesangial survival. |
Volume: |
3 |
Issue: |
10 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Taher L |
Year: |
2011 |
Journal: |
PLoS One |
Title: |
Global gene expression analysis of murine limb development. |
Volume: |
6 |
Issue: |
12 |
Pages: |
e28358 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Sequence and Mouse Genome Informatics Scientific Curators |
Year: |
2001 |
|
Title: |
Mouse Genome Sequence Project Annotation |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Shimizu H |
Year: |
2013 |
Journal: |
PLoS One |
Title: |
The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo. |
Volume: |
8 |
Issue: |
10 |
Pages: |
e75754 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wiese CB |
Year: |
2012 |
Journal: |
Front Neurosci |
Title: |
A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract. |
Volume: |
6 |
|
Pages: |
130 |
|
•
•
•
•
•
|
Publication |
First Author: |
Guo G |
Year: |
2010 |
Journal: |
Dev Cell |
Title: |
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. |
Volume: |
18 |
Issue: |
4 |
Pages: |
675-85 |
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•
•
•
•
•
|
Publication |
First Author: |
Yokoyama S |
Year: |
2009 |
Journal: |
Dev Cell |
Title: |
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |
Volume: |
17 |
Issue: |
6 |
Pages: |
836-48 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dickinson ME |
Year: |
2016 |
Journal: |
Nature |
Title: |
High-throughput discovery of novel developmental phenotypes. |
Volume: |
537 |
Issue: |
7621 |
Pages: |
508-514 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2001 |
|
Title: |
Gene Ontology Annotation by the MGI Curatorial Staff |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory |
Year: |
2012 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by The Jackson Laboratory |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Gray PA |
Year: |
2004 |
Journal: |
Science |
Title: |
Mouse brain organization revealed through direct genome-scale TF expression analysis. |
Volume: |
306 |
Issue: |
5705 |
Pages: |
2255-7 |
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•
•
•
•
•
|
Publication |
First Author: |
Koscielny G |
Year: |
2014 |
Journal: |
Nucleic Acids Res |
Title: |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
Volume: |
42 |
Issue: |
Database issue |
Pages: |
D802-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
International Mouse Strain Resource |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Wellcome Trust Sanger Institute |
Year: |
2009 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
|
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|
|
•
•
•
•
•
|
Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
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•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
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•
•
•
•
•
|
Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
|
•
•
•
•
•
|
Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
|
Title: |
Nomenclature Committee Use |
|
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|
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
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Title: |
GemPharmatech Website. |
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•
•
•
•
•
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Publication |
First Author: |
Skarnes WC |
Year: |
2011 |
Journal: |
Nature |
Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
Volume: |
474 |
Issue: |
7351 |
Pages: |
337-42 |
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•
•
•
•
•
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Publication |
First Author: |
GOA curators |
Year: |
2016 |
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Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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•
•
•
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•
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Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
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•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
•
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•
•
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Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
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•
•
•
•
•
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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|
•
•
•
•
•
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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|
•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
108
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
212
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Peeper DS |
Year: |
2002 |
Journal: |
Nat Cell Biol |
Title: |
A functional screen identifies hDRIL1 as an oncogene that rescues RAS-induced senescence. |
Volume: |
4 |
Issue: |
2 |
Pages: |
148-53 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ma K |
Year: |
2003 |
Journal: |
Mol Cancer Res |
Title: |
E2FBP1/DRIL1, an AT-rich interaction domain-family transcription factor, is regulated by p53. |
Volume: |
1 |
Issue: |
6 |
Pages: |
438-44 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kobayashi K |
Year: |
2006 |
Journal: |
Cancer Res |
Title: |
ARID3B induces malignant transformation of mouse embryonic fibroblasts and is strongly associated with malignant neuroblastoma. |
Volume: |
66 |
Issue: |
17 |
Pages: |
8331-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shandala T |
Year: |
2003 |
Journal: |
Development |
Title: |
The dead ringer/retained transcriptional regulatory gene is required for positioning of the longitudinal glia in the Drosophila embryonic CNS. |
Volume: |
130 |
Issue: |
8 |
Pages: |
1505-13 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ditch LM |
Year: |
2005 |
Journal: |
Development |
Title: |
Drosophila retained/dead ringer is necessary for neuronal pathfinding, female receptivity and repression of fruitless independent male courtship behaviors. |
Volume: |
132 |
Issue: |
1 |
Pages: |
155-64 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry represents a group of transcription factors, including ARID3A/B/C from humans and protein dead ringer (Retn) from Drosophila melanogaster. ARID3A (also known as E2FBP1 or Bright) is involved in the control of cell cycle progression by the RB1/E2F1 pathway and in B-cell differentiation [, ]. ARID3B has been linked to malignant neuroblastoma []. Retn is regulator of the late development of longitudinal glia []. Mutations in the Drosophila retn gene lead to female behavioral defects and alter a limited set of neurons in the CNS. Retn also affects a male behavioral pathway activated by fruM []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Kurkewich JL |
Year: |
2016 |
Journal: |
PLoS One |
Title: |
Arid3b Is Critical for B Lymphocyte Development. |
Volume: |
11 |
Issue: |
8 |
Pages: |
e0161468 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang S |
Year: |
2019 |
Journal: |
Genes Dev |
Title: |
Enhancement of LIN28B-induced hematopoietic reprogramming by IGF2BP3. |
Volume: |
33 |
Issue: |
15-16 |
Pages: |
1048-1068 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
94
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
240
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
601
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
568
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
409
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
599
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
536
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
568
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
379
 |
Fragment?: |
false |
|
•
•
•
•
•
|