Type |
Details |
Score |
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Jansen EJ |
Year: |
2016 |
Journal: |
Nat Commun |
Title: |
ATP6AP1 deficiency causes an immunodeficiency with hepatopathy, cognitive impairment and abnormal protein glycosylation. |
Volume: |
7 |
|
Pages: |
11600 |
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
Publication |
First Author: |
Ryan M |
Year: |
2008 |
Journal: |
Mol Biol Cell |
Title: |
Voa1p functions in V-ATPase assembly in the yeast endoplasmic reticulum. |
Volume: |
19 |
Issue: |
12 |
Pages: |
5131-42 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the transmembrane domain from ER/Golgi membrane proteins including V-type proton ATPase subunit S1 V0 complex accessory subunit Ac45 (VAS1, also known as V0 complex accessory subunit Ac45, ATP6AP1) from animals and the yeast homologue V0 assembly protein 1 (VOA1) which are essential for V0 ATPase assembly, stability and function [, ]. In humans, mutations of ATP6AP1 cause immunodeficiency with hypogammaglobulinemia, hepatopathy and neurocognitive abnormalities []. This entry also includes ER membrane BIG1 proteins from yeast, involved in cell wall biogenesis. |
|
•
•
•
•
•
|
Publication |
First Author: |
Ma T |
Year: |
2022 |
Journal: |
Nature |
Title: |
Low-dose metformin targets the lysosomal AMPK pathway through PEN2. |
Volume: |
603 |
Issue: |
7899 |
Pages: |
159-165 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen L |
Year: |
2024 |
Journal: |
J Bone Miner Res |
Title: |
Osteoclastic ATP6AP2 maintains β-catenin levels to prevent hyper-osteoclastic activation and trabecular bone-loss. |
Volume: |
39 |
Issue: |
12 |
Pages: |
1821-1834 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
463
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
463
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
378
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
463
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
463
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
487
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
463
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
336
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
336
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Miles AL |
Year: |
2017 |
Journal: |
Elife |
Title: |
The vacuolar-ATPase complex and assembly factors, TMEM199 and CCDC115, control HIF1α prolyl hydroxylation by regulating cellular iron levels. |
Volume: |
6 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Supek F |
Year: |
1994 |
Journal: |
J Biol Chem |
Title: |
A novel accessory subunit for vacuolar H(+)-ATPase from chromaffin granules. |
Volume: |
269 |
Issue: |
39 |
Pages: |
24102-6 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the luminal domain (LD) found in eukaryotic V-type proton ATPase subunit S1 (VAS1), involved in V-ATPase V0 assembly, also known as Ac45 subunit (ATP6AP1) [, ]. This domain folds as a globular β-prism structure which is structurally similar to LAMP1-3, thus, the LD domain of Ac45 is an evolutionarily conserved member of the LAMP family []. Ac45 is an ER membrane protein that guides the V-type ATPase into specialised subcellular compartments []and is critical for Vo complex assembly as it connects to multiple Vo subunitsand phospholipids in the c-ring []. Missense mutations in the X-linked ATP6AP1 gene cause immunodeficiency in males that leads to recurrent bacterial infection, hepatopathy, cognitive impairment, and abnormal protein glycosylation []. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
96
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
415
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
87
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
144
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
272
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
224
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
101
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
68
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Holthuis JC |
Year: |
1999 |
Journal: |
Eur J Biochem |
Title: |
Biosynthesis of the vacuolar H+-ATPase accessory subunit Ac45 in Xenopus pituitary. |
Volume: |
262 |
Issue: |
2 |
Pages: |
484-91 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
V-ATPases (also known as V1V0-ATPase or vacuolar ATPase) are found in the eukaryotic endomembrane system, and in the plasma membrane of prokaryotes and certain specialised eukaryotic cells. V-ATPases hydrolyse ATP to drive a proton pump, and are involved in a variety of vital intra- and inter-cellular processes such as receptor mediated endocytosis, protein trafficking, active transport of metabolites, homeostasis and neurotransmitter release []. V-ATPases are composed of two linked complexes: the V1 complex (subunits A-H) contains the catalytic core that hydrolyses ATP, while the V0 complex (subunits a, c, c', c'', d) forms the membrane-spanning pore. V-ATPases may have an additional role in membrane fusion through binding to t-SNARE proteins [].This entry represents the V0 complex Ac45 accessory subunit (ATP6AP1, also known as V-type proton ATPase subunit S1), an ER/Golgi membrane protein. This subunit is synthesized as an N-glycosylated 60kDa precursor that is intracellularly cleaved to a protein of about 45kDa. This subunit plays a crucial role on V0 assembly, stability and function as it connects to multiple V0 subunits and phospholipids in the c-ring []. This subunit assists the V-ATPase in the acidification of neuroendocrine granules []and guides the V-ATPase into specialized subcellular compartments such as neuroendocrine regulated secretory vesicles or the ruffled border of the osteoclast []. In humans, mutations of ATP6AP1 cause immunodeficiency with hypogammaglobulinemia, hepatopathy and neurocognitive abnormalities []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang L |
Year: |
2020 |
Journal: |
Mol Cell |
Title: |
Structures of a Complete Human V-ATPase Reveal Mechanisms of Its Assembly. |
Volume: |
80 |
Issue: |
3 |
Pages: |
501-511.e3 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bajjalieh S |
Year: |
2005 |
Journal: |
Cell |
Title: |
A new view of an old pore. |
Volume: |
121 |
Issue: |
4 |
Pages: |
496-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wilkens S |
Year: |
2005 |
Journal: |
Micron |
Title: |
A structural model of the vacuolar ATPase from transmission electron microscopy. |
Volume: |
36 |
Issue: |
2 |
Pages: |
109-26 |
|
•
•
•
•
•
|