Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:4886321 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3266523 |
Pattern: |
Widespread |
Stage: |
TS23 |
Assay Id: |
MGI:4945305 |
Age: |
embryonic day 15.5 |
Image: |
g00799 E15.5 |
|
Specimen Label: |
g00799 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1702128 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871620 |
|
Specimen Label: |
UC Davis_1871620 |
Detected: |
true |
Specimen Num: |
40 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1702128 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871621 |
|
Specimen Label: |
UC Davis_1871621 |
Detected: |
true |
Specimen Num: |
41 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1929028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871644 |
|
Specimen Label: |
UC Davis_1871644 |
Detected: |
true |
Specimen Num: |
60 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1929028 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871645 |
|
Specimen Label: |
UC Davis_1871645 |
Detected: |
true |
Specimen Num: |
61 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:3276428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871583 |
|
Specimen Label: |
UC Davis_1871583 |
Detected: |
true |
Specimen Num: |
8 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:3276428 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871622 |
|
Specimen Label: |
UC Davis_1871622 |
Detected: |
true |
Specimen Num: |
42 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5000553 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2852723 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5541113 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:5022 |
|
Specimen Label: |
GUDMAP:5022 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5000553 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2852723 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5541113 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:5023 |
|
Specimen Label: |
GUDMAP:5023 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5000553 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2874723 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5541113 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:5022 |
|
Specimen Label: |
GUDMAP:5022 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1915328 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871595 |
|
Specimen Label: |
UC Davis_1871595 |
Detected: |
true |
Specimen Num: |
19 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1915328 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871630 |
|
Specimen Label: |
UC Davis_1871630 |
Detected: |
true |
Specimen Num: |
49 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1915328 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871631 |
|
Specimen Label: |
UC Davis_1871631 |
Detected: |
true |
Specimen Num: |
50 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886321 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757723 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4945305 |
Age: |
embryonic day 15.5 |
Image: |
g00799 E15.5 |
Note: |
Expression was region specific and scattered. |
Specimen Label: |
g00799 E15.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4886321 |
Assay Type: |
RNA in situ |
Annotation Date: |
2011-04-11 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1757728 |
Pattern: |
Widespread |
Stage: |
TS28 |
Assay Id: |
MGI:4945305 |
Age: |
postnatal day 7 |
Image: |
g00799 P7 |
|
Specimen Label: |
g00799 P7 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5000553 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:2850023 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5541113 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:5022 |
|
Specimen Label: |
GUDMAP:5022 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5000553 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Male |
Emaps: |
EMAPS:2850023 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5541113 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:5023 |
|
Specimen Label: |
GUDMAP:5023 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5000553 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:1796223 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5541113 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:5022 |
|
Specimen Label: |
GUDMAP:5022 |
Detected: |
false |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Female |
Emaps: |
EMAPS:1796228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871603 |
|
Specimen Label: |
UC Davis_1871603 |
Detected: |
true |
Specimen Num: |
25 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1868228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871647 |
|
Specimen Label: |
UC Davis_1871647 |
Detected: |
true |
Specimen Num: |
63 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1868228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871648 |
|
Specimen Label: |
UC Davis_1871648 |
Detected: |
true |
Specimen Num: |
64 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1868228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692361 |
Age: |
postnatal adult |
Image: |
UC Davis_1871649 |
|
Specimen Label: |
UC Davis_1871649 |
Detected: |
true |
Specimen Num: |
65 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:6455448 |
Assay Type: |
RNA in situ |
Annotation Date: |
2020-09-16 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:2778225 |
Pattern: |
Not Specified |
Stage: |
TS25 |
Assay Id: |
MGI:6455467 |
Age: |
embryonic day 17.0 |
|
Note: |
Expression in tubular structures and glomeruli. |
Specimen Label: |
S4B antisense (right) |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
Publication |
First Author: |
Thomas EA |
Year: |
2001 |
Journal: |
GenBank Submission |
Title: |
Mus musculus insulin receptor tyrosine kinase substrate protein p53 mRNA, complete cds |
|
|
Pages: |
AF390178 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rokosh DG |
Year: |
2002 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Knockout of the alpha 1A/C-adrenergic receptor subtype: the alpha 1A/C is expressed in resistance arteries and is required to maintain arterial blood pressure. |
Volume: |
99 |
Issue: |
14 |
Pages: |
9474-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim Y |
Year: |
2020 |
Journal: |
Front Cell Neurosci |
Title: |
IRSp53 Deletion in Glutamatergic and GABAergic Neurons and in Male and Female Mice Leads to Distinct Electrophysiological and Behavioral Phenotypes. |
Volume: |
14 |
|
Pages: |
23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim Y |
Year: |
2021 |
Journal: |
Schizophr Bull |
Title: |
Hyperactive ACC-MDT Pathway Suppresses Prepulse Inhibition in Mice. |
Volume: |
47 |
Issue: |
1 |
Pages: |
31-43 |
|
•
•
•
•
•
|
Publication |
First Author: |
Matsuda S |
Year: |
2008 |
Journal: |
Ann Oncol |
Title: |
Insulin receptor substrate protein 53 (IRSp53) as a binding partner of antimetastasis molecule NESH, a member of Abelson interactor protein family. |
Volume: |
19 |
Issue: |
7 |
Pages: |
1356-1357 |
|
•
•
•
•
•
|
Publication |
First Author: |
Disanza A |
Year: |
2006 |
Journal: |
Nat Cell Biol |
Title: |
Regulation of cell shape by Cdc42 is mediated by the synergic actin-bundling activity of the Eps8-IRSp53 complex. |
Volume: |
8 |
Issue: |
12 |
Pages: |
1337-47 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sanda M |
Year: |
2009 |
Journal: |
Brain Res |
Title: |
The postsynaptic density protein, IQ-ArfGEF/BRAG1, can interact with IRSp53 through its proline-rich sequence. |
Volume: |
1251 |
|
Pages: |
7-15 |
|
•
•
•
•
•
|
Publication |
First Author: |
Robens JM |
Year: |
2010 |
Journal: |
Mol Cell Biol |
Title: |
Regulation of IRSp53-dependent filopodial dynamics by antagonism between 14-3-3 binding and SH3-mediated localization. |
Volume: |
30 |
Issue: |
3 |
Pages: |
829-44 |
|
•
•
•
•
•
|
Publication |
First Author: |
Disanza A |
Year: |
2013 |
Journal: |
EMBO J |
Title: |
CDC42 switches IRSp53 from inhibition of actin growth to elongation by clustering of VASP. |
Volume: |
32 |
Issue: |
20 |
Pages: |
2735-50 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lim KB |
Year: |
2008 |
Journal: |
J Biol Chem |
Title: |
The Cdc42 effector IRSp53 generates filopodia by coupling membrane protrusion with actin dynamics. |
Volume: |
283 |
Issue: |
29 |
Pages: |
20454-72 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lee Y |
Year: |
2017 |
Journal: |
Biochem Biophys Res Commun |
Title: |
Characterization of the zinc-induced Shank3 interactome of mouse synaptosome. |
Volume: |
494 |
Issue: |
3-4 |
Pages: |
581-586 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lee Y |
Year: |
2017 |
Journal: |
Front Mol Neurosci |
Title: |
Integrative Analysis of Brain Region-specific Shank3 Interactomes for Understanding the Heterogeneity of Neuronal Pathophysiology Related to SHANK3 Mutations. |
Volume: |
10 |
|
Pages: |
110 |
|
•
•
•
•
•
|
Publication |
First Author: |
Abou-Kheir W |
Year: |
2008 |
Journal: |
J Cell Sci |
Title: |
Membrane targeting of WAVE2 is not sufficient for WAVE2-dependent actin polymerization: a role for IRSp53 in mediating the interaction between Rac and WAVE2. |
Volume: |
121 |
Issue: |
Pt 3 |
Pages: |
379-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Saarikangas J |
Year: |
2011 |
Journal: |
J Cell Sci |
Title: |
Missing-in-metastasis MIM/MTSS1 promotes actin assembly at intercellular junctions and is required for integrity of kidney epithelia. |
Volume: |
124 |
Issue: |
Pt 8 |
Pages: |
1245-55 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chauhan BK |
Year: |
2009 |
Journal: |
Development |
Title: |
Cdc42- and IRSp53-dependent contractile filopodia tether presumptive lens and retina to coordinate epithelial invagination. |
Volume: |
136 |
Issue: |
21 |
Pages: |
3657-67 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chou AM |
Year: |
2017 |
Journal: |
Sci Rep |
Title: |
Redundant functions of I-BAR family members, IRSp53 and IRTKS, are essential for embryonic development. |
Volume: |
7 |
|
Pages: |
40485 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fernández E |
Year: |
2009 |
Journal: |
Mol Syst Biol |
Title: |
Targeted tandem affinity purification of PSD-95 recovers core postsynaptic complexes and schizophrenia susceptibility proteins. |
Volume: |
5 |
|
Pages: |
269 |
|
•
•
•
•
•
|
Publication |
First Author: |
Verpelli C |
Year: |
2011 |
Journal: |
J Biol Chem |
Title: |
Importance of Shank3 protein in regulating metabotropic glutamate receptor 5 (mGluR5) expression and signaling at synapses. |
Volume: |
286 |
Issue: |
40 |
Pages: |
34839-50 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mori AD |
Year: |
2006 |
Journal: |
Dev Biol |
Title: |
Tbx5-dependent rheostatic control of cardiac gene expression and morphogenesis. |
Volume: |
297 |
Issue: |
2 |
Pages: |
566-86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sawallisch C |
Year: |
2009 |
Journal: |
J Biol Chem |
Title: |
The insulin receptor substrate of 53 kDa (IRSp53) limits hippocampal synaptic plasticity. |
Volume: |
284 |
Issue: |
14 |
Pages: |
9225-36 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li J |
Year: |
2017 |
Journal: |
Nat Neurosci |
Title: |
Spatiotemporal profile of postsynaptic interactomes integrates components of complex brain disorders. |
Volume: |
20 |
Issue: |
8 |
Pages: |
1150-1161 |
|
•
•
•
•
•
|
Publication |
First Author: |
Desai J |
Year: |
2006 |
Journal: |
Hum Mol Genet |
Title: |
Nell1-deficient mice have reduced expression of extracellular matrix proteins causing cranial and vertebral defects. |
Volume: |
15 |
Issue: |
8 |
Pages: |
1329-41 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dickinson ME |
Year: |
2016 |
Journal: |
Nature |
Title: |
High-throughput discovery of novel developmental phenotypes. |
Volume: |
537 |
Issue: |
7621 |
Pages: |
508-514 |
|
•
•
•
•
•
|
Publication |
First Author: |
Koscielny G |
Year: |
2014 |
Journal: |
Nucleic Acids Res |
Title: |
The International Mouse Phenotyping Consortium Web Portal, a unified point of access for knockout mice and related phenotyping data. |
Volume: |
42 |
Issue: |
Database issue |
Pages: |
D802-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Stryke D |
Year: |
2003 |
Journal: |
Nucleic Acids Res |
Title: |
BayGenomics: a resource of insertional mutations in mouse embryonic stem cells. |
Volume: |
31 |
Issue: |
1 |
Pages: |
278-81 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bedogni F |
Year: |
2021 |
Journal: |
Front Mol Neurosci |
Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
Volume: |
14 |
|
Pages: |
686034 |
|
•
•
•
•
•
|
Publication |
First Author: |
International Knockout Mouse Consortium |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of modified allele data from IKMC and creation of new knockout alleles |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
International Mouse Strain Resource |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Wellcome Trust Sanger Institute |
Year: |
2009 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the KOMP project by the Wellcome Trust Sanger Institute |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
DDB, FB, MGI, GOA, ZFIN curators |
Year: |
2001 |
|
Title: |
Gene Ontology annotation through association of InterPro records with GO terms |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Chromosome assignment of mouse genes using the Mouse Genome Sequencing Consortium (MGSC) assembly and the ENSEMBL Database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Skarnes WC |
Year: |
2011 |
Journal: |
Nature |
Title: |
A conditional knockout resource for the genome-wide study of mouse gene function. |
Volume: |
474 |
Issue: |
7351 |
Pages: |
337-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion IS151, GENSAT Project at Rockefeller University |
Allele Type: |
Transgenic |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant stock, transgenic |
|
•
•
•
•
•
|
Publication |
First Author: |
Tholen LE |
Year: |
2023 |
Journal: |
FASEB J |
Title: |
HNF1β-associated cyst development and electrolyte disturbances are not explained by BAIAP2L2 expression. |
Volume: |
37 |
Issue: |
1 |
Pages: |
e22696 |
|
•
•
•
•
•
|
Publication |
First Author: |
Krugmann S |
Year: |
2001 |
Journal: |
Curr Biol |
Title: |
Cdc42 induces filopodia by promoting the formation of an IRSp53:Mena complex. |
Volume: |
11 |
Issue: |
21 |
Pages: |
1645-55 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ahmed S |
Year: |
2010 |
Journal: |
Semin Cell Dev Biol |
Title: |
I-BAR domains, IRSp53 and filopodium formation. |
Volume: |
21 |
Issue: |
4 |
Pages: |
350-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ferrari I |
Year: |
2012 |
Journal: |
Commun Integr Biol |
Title: |
LIN7-IRSp53: A novel pathway for filopodia and neurite formation? |
Volume: |
5 |
Issue: |
6 |
Pages: |
631-3 |
|
•
•
•
•
•
|
Publication |
First Author: |
Weiss SM |
Year: |
2009 |
Journal: |
Cell Host Microbe |
Title: |
IRSp53 links the enterohemorrhagic E. coli effectors Tir and EspFU for actin pedestal formation. |
Volume: |
5 |
Issue: |
3 |
Pages: |
244-58 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
IRSp53, also known as IRS-58 or BAIAP2 (brain-specific angiogenesis inhibitor 1-associated protein 2), is an I-BAR (Bin/amphipysin/Rvs) domain containing protein. BAR domain forms an anti-parallel all-helical dimer, with a curved (banana-like) shape, that promotes membrane tubulation. BAR domain proteins can be classified into three types: BAR, F-BAR and I-BAR. BAR and F-BAR proteins generate positive membrane curvature, while I-BAR proteins induce negative curvature [].IRSp53 is an adaptor protein that acts at the membrane-actin interface, coupling membrane deformation with F-actin polymerisation []. It is involved in the formation of filopodia and lamellipodia in cultured mesenchymal cells and contributes to assembly/maintenance of tight junctions in cultured epithelial cells []. IRSp53 contains an N-terminal I-BAR domain, followed by a partial CRIB domain and a SH3 domain. It binds to small GTPase Cdc42, Rac1 and WAVE1 []. IRSp53 binds Rac through its I-BAR domain and to WAVE through its SH3 domain, and thus contributes to membrane ruffling []. Its SH3 domain also interacts with other regulators of actin dynamics, such as WAVE2, Mena, mDia1, Dynamin1, Eps8 and N-WASP []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the SH3 domain of IRSp53. The SH3 domain of IRSp53 has been shown to bind the proline-rich C terminus of EspFu (E. coli secreted protein F-like from prophage U) [].IRSp53, also known as IRS-58 or BAIAP2 (brain-specific angiogenesis inhibitor 1-associated protein 2), is an I-BAR (Bin/amphipysin/Rvs) domain containing protein. BAR domain forms an anti-parallel all-helical dimer, with a curved (banana-like) shape, that promotes membrane tubulation. BAR domain proteins can be classified into three types: BAR, F-BAR and I-BAR. BAR and F-BAR proteins generate positive membrane curvature, while I-BAR proteins induce negative curvature [].IRSp53 is an adaptor protein that acts at the membrane-actin interface, coupling membrane deformation with F-actin polymerisation []. It is involved in the formation of filopodia and lamellipodia in cultured mesenchymal cells and contributes to assembly/maintenance of tight junctions in cultured epithelial cells []. IRSp53 contains an N-terminal I-BAR domain, followed by a partial CRIB domain and a SH3 domain. It binds to small GTPase Cdc42, Rac1 and WAVE1 []. IRSp53 binds Rac through its I-BAR domain and to WAVE through its SH3 domain, and thus contributes to membrane ruffling []. Its SH3 domain also interacts with other regulators of actin dynamics, such as WAVE2, Mena, mDia1, Dynamin1, Eps8 and N-WASP []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhao H |
Year: |
2011 |
Journal: |
Curr Opin Cell Biol |
Title: |
I-BAR domain proteins: linking actin and plasma membrane dynamics. |
Volume: |
23 |
Issue: |
1 |
Pages: |
14-21 |
|
•
•
•
•
•
|
Publication |
First Author: |
Pykäläinen A |
Year: |
2011 |
Journal: |
Nat Struct Mol Biol |
Title: |
Pinkbar is an epithelial-specific BAR domain protein that generates planar membrane structures. |
Volume: |
18 |
Issue: |
8 |
Pages: |
902-7 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
535
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
521
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
522
 |
Fragment?: |
false |
|
•
•
•
•
•
|