| Type |
Details |
Score |
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
| DO Term |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; targeted mutation 2, Shanghai Model Organisms Center |
| Allele Type: |
Targeted |
| Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
| GO Term |
|
•
•
•
•
•
|
| GO Term |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; endonuclease-mediated mutation 2, Shanghai Model Organisms Center |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; targeted mutation 3, Shanghai Model Organisms Center |
| Allele Type: |
Targeted |
| Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Loenen WA |
| Year: |
1992 |
| Journal: |
J Immunol |
| Title: |
Genomic organization and chromosomal localization of the human CD27 gene. |
| Volume: |
149 |
| Issue: |
12 |
| Pages: |
3937-43 |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Conditional ready, No functional change |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Burchill MA |
| Year: |
2015 |
| Journal: |
Eur J Immunol |
| Title: |
T cells compete by cleaving cell surface CD27 and blocking access to CD70-bearing APCs. |
| Volume: |
45 |
| Issue: |
11 |
| Pages: |
3140-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Heckel F |
| Year: |
2022 |
| Journal: |
Commun Biol |
| Title: |
Agonistic CD27 antibody potency is determined by epitope-dependent receptor clustering augmented through Fc-engineering. |
| Volume: |
5 |
| Issue: |
1 |
| Pages: |
229 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
He LZ |
| Year: |
2013 |
| Journal: |
J Immunol |
| Title: |
Agonist anti-human CD27 monoclonal antibody induces T cell activation and tumor immunity in human CD27-transgenic mice. |
| Volume: |
191 |
| Issue: |
8 |
| Pages: |
4174-83 |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Goodwin RG |
| Year: |
1993 |
| Journal: |
Cell |
| Title: |
Molecular and biological characterization of a ligand for CD27 defines a new family of cytokines with homology to tumor necrosis factor. |
| Volume: |
73 |
| Issue: |
3 |
| Pages: |
447-56 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hayakawa Y |
| Year: |
2011 |
| Journal: |
Cancer Sci |
| Title: |
Early activation and interferon-γ production of tumor-infiltrating mature CD27 high natural killer cells. |
| Volume: |
102 |
| Issue: |
11 |
| Pages: |
1967-71 |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; wild type |
|
|
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; targeted mutation 1, Jannie Borst |
| Allele Type: |
Targeted |
| Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; gene trap OST33464, Lexicon Genetics |
| Allele Type: |
Gene trapped |
|
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; targeted mutation 1, Velocigene |
| Allele Type: |
Targeted |
| Attribute String: |
Null/knockout, Reporter |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; targeted mutation 1.1, Isabel Vogel |
| Allele Type: |
Targeted |
| Attribute String: |
Conditional ready, No functional change |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; targeted mutation 1, GemPharmatech |
| Allele Type: |
Targeted |
| Attribute String: |
Humanized sequence, Inserted expressed sequence |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; endonuclease-mediated mutation 1, Cyagen Biosciences |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; endonuclease-mediated mutation 2, Cyagen Biosciences |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Conditional ready, No functional change |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kamazani FM |
| Year: |
2013 |
| Journal: |
Med Oncol |
| Title: |
CD44 and CD27 expression pattern in B cell precursor acute lymphoblastic leukemia and its clinical significance. |
| Volume: |
30 |
| Issue: |
1 |
| Pages: |
359 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
195
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
The TNF receptor family member CD27 signals to Jun N-terminal kinase via Traf-2. |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
Inhibition of terminal differentiation of B cells mediated by CD27 and CD40 involves signaling through JNK. |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
Not specified |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; targeted mutation 2e, Helmholtz Zentrum Muenchen GmbH |
| Allele Type: |
Targeted |
| Attribute String: |
Null/knockout, Reporter |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; endonuclease-mediated mutation 6, GemPharmatech Co., Ltd |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; endonuclease-mediated mutation 1, GemPharmatech Co., Ltd |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Inserted expressed sequence |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; endonuclease-mediated mutation 1, Institute of Molecular Genetics |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Allele |
| Name: |
CD27 antigen; endonuclease-mediated mutation 3, Shanghai Model Organisms Center |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Cd27/Cd27 |
| Background: |
either: B6.129P2-CD27 or 129P2/OlaHsd-Tnfrsf7 |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Cd27/Cd27 |
| Background: |
B6.129P2-Cd27 |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Cd27/Cd27 |
| Background: |
C57BL/6NCrl-Cd27/Ccpcz |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Loenen WA |
| Year: |
1998 |
| Journal: |
Semin Immunol |
| Title: |
CD27 and (TNFR) relatives in the immune system: their role in health and disease. |
| Volume: |
10 |
| Issue: |
6 |
| Pages: |
417-22 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Satpathy S |
| Year: |
2010 |
| Journal: |
J Immunol |
| Title: |
Inhibition of terminal differentiation of B cells mediated by CD27 and CD40 involves signaling through JNK. |
| Volume: |
185 |
| Issue: |
11 |
| Pages: |
6499-507 |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Cd27/Cd27 Tg(CD19-Tnfsf7)#Rvl/? |
| Background: |
involves: 129P2/OlaHsd * C57BL/6 |
| Zygosity: |
cx |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Prasad KV |
| Year: |
1997 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
CD27, a member of the tumor necrosis factor receptor family, induces apoptosis and binds to Siva, a proapoptotic protein. |
| Volume: |
94 |
| Issue: |
12 |
| Pages: |
6346-51 |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Xue L |
| Year: |
2002 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Siva-1 binds to and inhibits BCL-X(L)-mediated protection against UV radiation-induced apoptosis. |
| Volume: |
99 |
| Issue: |
10 |
| Pages: |
6925-30 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jacquot S |
| Year: |
2000 |
| Journal: |
Immunol Res |
| Title: |
CD27/CD70 interactions regulate T dependent B cell differentiation. |
| Volume: |
21 |
| Issue: |
1 |
| Pages: |
23-30 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
CD70 is a ligand of CD27 and is a TNF related transmembrane protein induced upon activation on T and B cells []. The CD27/CD70 interaction plays a key role in T dependent B cell responses and is responsible for plasma cell differentiation []. The CD27/CD70 pathway has been shown to contribute to the pathophysiology of autoimmunity []. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Han BK |
| Year: |
2016 |
| Journal: |
Semin Arthritis Rheum |
| Title: |
The CD27-CD70 pathway and pathogenesis of autoimmune disease. |
| Volume: |
45 |
| Issue: |
4 |
| Pages: |
496-501 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Denoeud J |
| Year: |
2011 |
| Journal: |
J Leukoc Biol |
| Title: |
Role of CD27/CD70 pathway of activation in immunity and tolerance. |
| Volume: |
89 |
| Issue: |
2 |
| Pages: |
195-203 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
Tumor necrosis factor receptor superfamily member 7 (TNFRSF7), also known as CD27, T14, S152, Tp55, S152 or LPFS2, has a key role in the generation of immunological memory via effects on T-cell expansion and survival, and B cell development [, ]. It binds to ligand CD70, and plays a key role in regulating B-cell activation and immunoglobulin synthesis. CD27 transduces signals that lead to the activation of NF-kappaB and MAPK8/JNK, and mediates the signaling process through adaptor proteins TRAF2 and TRAF5. CD27-binding protein (SIVA), a pro-apoptotic protein, can bind to CD27 and may play an important role in the apoptosis induced by this receptor []. The potential role of the CD27/CD70 pathway in the course of inflammatory diseases, such as arthritis, and inflammatory bowel disease, suggests that CD70 may be a target for immune intervention. The expression of CD27 and CD44 molecules correlates with the differentiation stage of B cell precursors and has been shown to have a biological significance in acute lymphoblastic leukemia [].This entry represents the N-terminal domain of TNFRSF7. TNF-receptors are modular proteins. The N-terminal extracellular part contains a cysteine-rich region responsible for ligand-binding. This region is composed of small modules of about 40 residues containing 6 conserved cysteines; the number and type of modules can vary in different members of the family [, , ]. |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
175
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
175
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
Siva binds to the CD27 cytoplasmic tail. It has a DD homology region, a box-B-like ring finger, and a zinc finger-like domain. Overexpression of Siva in various cell lines induces apoptosis, suggesting an important role for Siva in the CD27-transduced apoptotic pathway []. Siva-1 binds to and inhibits BCL-X(L)-mediated protection against UV radiation-induced apoptosis. Indeed, the unique amphipathic helical region (SAH) present in Siva-1 is required for its binding to BCL-X(L) and sensitising cells to UV radiation. Natural complexes of Siva-1/BCL-X(L) are detected in HUT78 and murine thymocyte, suggesting a potential role for Siva-1 in regulating T cell homeostasis []. |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus caroli |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus pahari |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
Mus spretus |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Henke A |
| Year: |
2001 |
| Journal: |
Virology |
| Title: |
The apoptotic capability of coxsackievirus B3 is influenced by the efficient interaction between the capsid protein VP2 and the proapoptotic host protein Siva. |
| Volume: |
289 |
| Issue: |
1 |
| Pages: |
15-22 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Li N |
| Year: |
2011 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Siva1 suppresses epithelial-mesenchymal transition and metastasis of tumor cells by inhibiting stathmin and stabilizing microtubules. |
| Volume: |
108 |
| Issue: |
31 |
| Pages: |
12851-6 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1510754 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2009-08-25 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3270422 |
|
| Stage: |
TS22 |
| Assay Id: |
MGI:4354920 |
| Age: |
embryonic day 14.5 |
|
|
| Specimen Label: |
Table S5 - Siva |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:1737328 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691526 |
| Age: |
postnatal adult |
| Image: |
HMGU_1366716 |
| Note: |
kidney |
| Specimen Label: |
HMGU_1366716 |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1737328 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691526 |
| Age: |
postnatal adult |
| Image: |
HMGU_692931 |
| Note: |
kidney |
| Specimen Label: |
HMGU_692931 |
| Detected: |
true |
| Specimen Num: |
17 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:1706828 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691526 |
| Age: |
postnatal adult |
| Image: |
HMGU_1366710 |
|
| Specimen Label: |
HMGU_1366710 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
|
| Assay Type: |
In situ reporter (knock in) |
| Annotation Date: |
2021-04-16 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:1706828 |
| Pattern: |
Not Specified |
| Stage: |
TS28 |
| Assay Id: |
MGI:6691526 |
| Age: |
postnatal adult |
| Image: |
HMGU_692919 |
|
| Specimen Label: |
HMGU_692919 |
| Detected: |
true |
| Specimen Num: |
11 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1510754 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2009-08-25 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3271122 |
|
| Stage: |
TS22 |
| Assay Id: |
MGI:4354920 |
| Age: |
embryonic day 14.5 |
|
| Note: |
There is no expression in either the upper or lower cortical plate. |
| Specimen Label: |
Table S5 - Siva |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:1510754 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2023-09-18 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3271122 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:7526629 |
| Age: |
embryonic day 14.5 |
|
|
| Specimen Label: |
Supplementary table 2 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|