Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:5001580 |
Assay Type: |
RNA in situ |
Annotation Date: |
2014-02-07 |
Strength: |
Absent |
Sex: |
Female |
Emaps: |
EMAPS:1796223 |
|
Stage: |
TS23 |
Assay Id: |
MGI:5542134 |
Age: |
embryonic day 15.5 |
Image: |
GUDMAP:8704 |
|
Specimen Label: |
GUDMAP:8704 |
Detected: |
false |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:254906 |
Assay Type: |
RNA in situ |
Annotation Date: |
2005-08-30 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1717122 |
Pattern: |
Regionally restricted |
Stage: |
TS22 |
Assay Id: |
MGI:3586142 |
Age: |
embryonic day 14.0 |
Image: |
E14 |
Note: |
Expression was detected in the outer neuroblastic layer but was higher in a subset of cells. |
Specimen Label: |
E14 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
Publication |
First Author: |
Perez JL |
Year: |
1994 |
Journal: |
Oncogene |
Title: |
Identification and chromosomal mapping of a receptor tyrosine kinase with a putative phospholipid binding sequence in its ectodomain. |
Volume: |
9 |
Issue: |
1 |
Pages: |
211-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Krohn JB |
Year: |
2016 |
Journal: |
Arterioscler Thromb Vasc Biol |
Title: |
Discoidin Domain Receptor-1 Regulates Calcific Extracellular Vesicle Release in Vascular Smooth Muscle Cell Fibrocalcific Response via Transforming Growth Factor-β Signaling. |
Volume: |
36 |
Issue: |
3 |
Pages: |
525-33 |
|
•
•
•
•
•
|
Publication |
First Author: |
Girgert R |
Year: |
2010 |
Journal: |
Fibrogenesis Tissue Repair |
Title: |
Integrin α2-deficient mice provide insights into specific functions of collagen receptors in the kidney. |
Volume: |
3 |
|
Pages: |
19 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sturgess JE |
Year: |
2010 |
Journal: |
Eur J Neurosci |
Title: |
Adenosine A1 and A2A receptors are not upstream of caffeine's dopamine D2 receptor-dependent aversive effects and dopamine-independent rewarding effects. |
Volume: |
32 |
Issue: |
1 |
Pages: |
143-54 |
|
•
•
•
•
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|
Publication |
First Author: |
Affo S |
Year: |
2021 |
Journal: |
Cancer Cell |
Title: |
Promotion of cholangiocarcinoma growth by diverse cancer-associated fibroblast subpopulations. |
Volume: |
39 |
Issue: |
6 |
Pages: |
866-882.e11 |
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•
•
•
•
•
|
Publication |
First Author: |
Franco-Pons N |
Year: |
2006 |
Journal: |
Neuroscience |
Title: |
Expression of discoidin domain receptor 1 during mouse brain development follows the progress of myelination. |
Volume: |
140 |
Issue: |
2 |
Pages: |
463-75 |
|
•
•
•
•
•
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Publication |
First Author: |
Gilardi-Hebenstreit P |
Year: |
1992 |
Journal: |
Oncogene |
Title: |
An Eph-related receptor protein tyrosine kinase gene segmentally expressed in the developing mouse hindbrain. |
Volume: |
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Issue: |
12 |
Pages: |
2499-506 |
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•
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•
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Publication |
First Author: |
Bozza M |
Year: |
1995 |
Journal: |
Genomics |
Title: |
Structural characterization and chromosomal location of the mouse macrophage migration inhibitory factor gene and pseudogenes. |
Volume: |
27 |
Issue: |
3 |
Pages: |
412-9 |
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•
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•
•
•
|
Publication |
First Author: |
Filliol A |
Year: |
2022 |
Journal: |
Nature |
Title: |
Opposing roles of hepatic stellate cell subpopulations in hepatocarcinogenesis. |
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Publication |
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Journal: |
Genomics |
Title: |
Murine chromosomal location of five bHLH-Zip transcription factor genes. |
Volume: |
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Pages: |
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Year: |
2013 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Structural basis for endosomal trafficking of diverse transmembrane cargos by PX-FERM proteins. |
Volume: |
110 |
Issue: |
8 |
Pages: |
E643-52 |
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Publication |
First Author: |
Kenney-Hunt JP |
Year: |
2006 |
Journal: |
Mamm Genome |
Title: |
Quantitative trait loci for body size components in mice. |
Volume: |
17 |
Issue: |
6 |
Pages: |
526-37 |
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•
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•
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Publication |
First Author: |
Robinson DR |
Year: |
2000 |
Journal: |
Oncogene |
Title: |
The protein tyrosine kinase family of the human genome. |
Volume: |
19 |
Issue: |
49 |
Pages: |
5548-57 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shanghai Model Organisms Center |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
European Mouse Mutant Archive |
Year: |
2003 |
Journal: |
Unpublished |
Title: |
Information obtained from the European Mouse Mutant Archive (EMMA) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Blackshaw S |
Year: |
2004 |
Journal: |
PLoS Biol |
Title: |
Genomic analysis of mouse retinal development. |
Volume: |
2 |
Issue: |
9 |
Pages: |
E247 |
|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators, MGI curators |
Year: |
2001 |
|
Title: |
Gene Ontology annotation based on Enzyme Commission mapping |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hansen J |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. |
Volume: |
100 |
Issue: |
17 |
Pages: |
9918-22 |
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•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2016 |
|
Title: |
Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
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|
•
•
•
•
•
|
Publication |
First Author: |
Thompson CL |
Year: |
2014 |
Journal: |
Neuron |
Title: |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
Volume: |
83 |
Issue: |
2 |
Pages: |
309-323 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data |
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|
•
•
•
•
•
|
Publication |
First Author: |
Bedogni F |
Year: |
2021 |
Journal: |
Front Mol Neurosci |
Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
Volume: |
14 |
|
Pages: |
686034 |
|
•
•
•
•
•
|
Publication |
First Author: |
International Knockout Mouse Consortium |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of modified allele data from IKMC and creation of new knockout alleles |
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|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Lennon G |
Year: |
1999 |
Journal: |
Database Download |
Title: |
WashU-HHMI Mouse EST Project |
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|
•
•
•
•
•
|
Publication |
First Author: |
International Mouse Strain Resource |
Year: |
2014 |
Journal: |
Database Download |
Title: |
MGI download of germline transmission data for alleles from IMSR strain data |
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|
•
•
•
•
•
|
Publication |
First Author: |
GUDMAP Consortium |
Year: |
2004 |
Journal: |
www.gudmap.org |
Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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•
•
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Publication |
First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
Year: |
2014 |
Journal: |
Database Release |
Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
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•
•
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•
•
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Publication |
First Author: |
Hansen GM |
Year: |
2008 |
Journal: |
Genome Res |
Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
Volume: |
18 |
Issue: |
10 |
Pages: |
1670-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Helmholtz Zentrum Muenchen GmbH |
Year: |
2010 |
Journal: |
MGI Direct Data Submission |
Title: |
Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu) |
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|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2014 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
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•
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Publication |
First Author: |
Magdaleno S |
Year: |
2006 |
Journal: |
PLoS Biol |
Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
Volume: |
4 |
Issue: |
4 |
Pages: |
e86 |
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Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
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Publication |
First Author: |
Adams DJ |
Year: |
2024 |
Journal: |
Nature |
Title: |
Genetic determinants of micronucleus formation in vivo. |
Volume: |
627 |
Issue: |
8002 |
Pages: |
130-136 |
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Publication |
First Author: |
MGD Nomenclature Committee |
Year: |
1995 |
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Title: |
Nomenclature Committee Use |
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Publication |
First Author: |
Zambrowicz BP |
Year: |
2003 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
Volume: |
100 |
Issue: |
24 |
Pages: |
14109-14 |
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Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
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Title: |
GemPharmatech Website. |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
Year: |
2008 |
Journal: |
Database Download |
Title: |
Mouse Gene Trap Data Load from dbGSS |
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Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
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Title: |
Cyagen Biosciences Website. |
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Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
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Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
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Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
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Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
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Pages: |
563-73 |
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Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
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Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
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Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
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Title: |
Annotation inferences using phylogenetic trees |
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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•
•
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•
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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•
•
•
•
•
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
•
•
•
•
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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•
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•
•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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•
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE46577 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Allele |
Name: |
discoidin domain receptor family, member 1; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
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•
•
•
•
|
Publication |
First Author: |
Canning P |
Year: |
2014 |
Journal: |
J Mol Biol |
Title: |
Structural mechanisms determining inhibition of the collagen receptor DDR1 by selective and multi-targeted type II kinase inhibitors. |
Volume: |
426 |
Issue: |
13 |
Pages: |
2457-70 |
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•
•
•
•
•
|
Publication |
First Author: |
Vogel W |
Year: |
1997 |
Journal: |
Mol Cell |
Title: |
The discoidin domain receptor tyrosine kinases are activated by collagen. |
Volume: |
1 |
Issue: |
1 |
Pages: |
13-23 |
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•
•
•
•
•
|
Publication |
First Author: |
Shrivastava A |
Year: |
1997 |
Journal: |
Mol Cell |
Title: |
An orphan receptor tyrosine kinase family whose members serve as nonintegrin collagen receptors. |
Volume: |
1 |
Issue: |
1 |
Pages: |
25-34 |
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•
•
•
•
|
Publication |
First Author: |
Xu L |
Year: |
2007 |
Journal: |
Arthritis Rheum |
Title: |
Increased expression of the collagen receptor discoidin domain receptor 2 in articular cartilage as a key event in the pathogenesis of osteoarthritis. |
Volume: |
56 |
Issue: |
8 |
Pages: |
2663-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
Márquez J |
Year: |
2014 |
Journal: |
Histol Histopathol |
Title: |
Role of discoidin domain receptor 2 in wound healing. |
Volume: |
29 |
Issue: |
11 |
Pages: |
1355-64 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hammerman PS |
Year: |
2011 |
Journal: |
Cancer Discov |
Title: |
Mutations in the DDR2 kinase gene identify a novel therapeutic target in squamous cell lung cancer. |
Volume: |
1 |
Issue: |
1 |
Pages: |
78-89 |
|
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•
•
•
•
|
Publication |
First Author: |
Roberts ME |
Year: |
2011 |
Journal: |
Eur Respir J |
Title: |
Discoidin domain receptor 1 regulates bronchial epithelial repair and matrix metalloproteinase production. |
Volume: |
37 |
Issue: |
6 |
Pages: |
1482-93 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ram R |
Year: |
2006 |
Journal: |
J Neurooncol |
Title: |
Discoidin domain receptor-1a (DDR1a) promotes glioma cell invasion and adhesion in association with matrix metalloproteinase-2. |
Volume: |
76 |
Issue: |
3 |
Pages: |
239-48 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
The discoidin domain-containing receptor (DDR) family includes DDR1 and DDR2. DDR family members are receptor tyrosine kinases (RTKs) whose activating ligands are various collagens []. The proteins contain an extracellular discoidin domain, which binds various collagen proteins, and an intracellular tyrosine kinase domain.DDR2 may have a role in wound healing; DDR2 signalling regulates cell proliferation and extracellular matrix synthesis, which are key aspects of fibroblast contribution to tissue healing []. Increased expression of DDR2 may also be important in the pathogenesis of osteoarthritis [], and there is evidence that the receptor could be implicated in certain forms of cancer - mutations in the DDR2 kinase gene have been detected in ~ 4% of squamous cell lung cancers [].Epithelial discoidin domain-containing receptor 1 (also known as DDR1) is involved in smooth muscle cell migration and matrix metalloproteinase expression []. It is responsible for maintaining the normal structure of skin and kidney epithelia []. The receptor may play a critical role in inducing tumour cell adhesion and invasion []. Itsstructure has been solved []. |
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•
•
•
•
•
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Publication |
First Author: |
Hilton HN |
Year: |
2008 |
Journal: |
Biochim Biophys Acta |
Title: |
KIBRA interacts with discoidin domain receptor 1 to modulate collagen-induced signalling. |
Volume: |
1783 |
Issue: |
3 |
Pages: |
383-93 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang J |
Year: |
2022 |
Journal: |
Bioact Mater |
Title: |
Matrix stiffness exacerbates the proinflammatory responses of vascular smooth muscle cell through the DDR1-DNMT1 mechanotransduction axis. |
Volume: |
17 |
|
Pages: |
406-424 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wu R |
Year: |
2020 |
Journal: |
Sci Rep |
Title: |
Fate and functional roles of Prominin 1+ cells in liver injury and cancer. |
Volume: |
10 |
Issue: |
1 |
Pages: |
19412 |
|
•
•
•
•
•
|
Publication |
First Author: |
Xu S |
Year: |
2019 |
Journal: |
Biol Open |
Title: |
Discoidin domain receptor 1 deficiency in vascular smooth muscle cells leads to mislocalisation of N-cadherin contacts. |
Volume: |
8 |
Issue: |
8 |
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•
•
•
•
•
|
Publication |
First Author: |
Han T |
Year: |
2020 |
Journal: |
PLoS One |
Title: |
Periostin interaction with discoidin domain receptor-1 (DDR1) promotes cartilage degeneration. |
Volume: |
15 |
Issue: |
4 |
Pages: |
e0231501 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
584
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
264
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
143
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
854
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
911
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
874
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
891
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
911
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
|
•
•
•
•
•
|