Type |
Details |
Score |
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
•
•
•
•
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Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
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|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
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•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
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|
•
•
•
•
•
|
Publication |
First Author: |
Kedde M |
Year: |
2007 |
Journal: |
Cell |
Title: |
RNA-binding protein Dnd1 inhibits microRNA access to target mRNA. |
Volume: |
131 |
Issue: |
7 |
Pages: |
1273-86 |
|
•
•
•
•
•
|
Allele |
Name: |
DND microRNA-mediated repression inhibitor 1; endonuclease-mediated mutation 1, Blanche Capel |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Reporter |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Dnd1/Dnd1<+> |
Background: |
involves: C57BL/6J * CD-1 * SJL/J |
Zygosity: |
ht |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Allele |
Name: |
gene trap ROSA 26, Philippe Soriano; targeted mutation 1, Angabin Matin |
Allele Type: |
Targeted |
Attribute String: |
Conditional ready, Epitope tag, Inserted expressed sequence |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 1, Yumiko Saga |
Allele Type: |
Transgenic |
Attribute String: |
Conditional ready, Epitope tag, Inserted expressed sequence, Reporter |
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•
•
•
•
•
|
Publication |
First Author: |
Ketting RF |
Year: |
2007 |
Journal: |
Cell |
Title: |
A dead end for microRNAs. |
Volume: |
131 |
Issue: |
7 |
Pages: |
1226-7 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the RNA recognition motif 1 (RRM1) of DND1, an RNA-binding protein that is essential for maintaining viable germ cells in vertebrates [, ]. It interacts with the 3'-untranslated region (3'-UTR) of multiple messenger RNAs (mRNAs) and prevents micro-RNA (miRNA) mediated repression of mRNA [, ]. For instance, DND1 binds cell cycle inhibitor, P27 (p27Kip1, CDKN1B), and cell cycle regulator and tumor suppressor, LATS2 (large tumor suppressor, homologue 2 of Drosophila) []. It helps maintain their protein expression through blocking the inhibitory function of microRNAs (miRNA) from these transcripts. DND1 may also impose another level of translational regulation to modulate expression of critical factors in embryonic stem (ES) cells. DND1 interacts specifically with apolipoprotein B editing complex 3 (APOBEC3), a multi-functional protein inhibiting retroviral replication. The DND1-APOBEC3 interaction may play a role in maintaining viability of germ cells and for preventing germ cell tumor development []. DND1 contains two conserved RNA recognition motifs (RRMs). |
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•
•
•
•
•
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Publication |
First Author: |
Nunez L |
Year: |
2019 |
Journal: |
Genesis |
Title: |
Generation of a novel mouse strain with conditional, cell-type specific, expression of DND1. |
Volume: |
57 |
Issue: |
11-12 |
Pages: |
e23335 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhu R |
Year: |
2011 |
Journal: |
BMC Mol Biol |
Title: |
Transcripts that associate with the RNA binding protein, DEAD-END (DND1), in embryonic stem (ES) cells. |
Volume: |
12 |
|
Pages: |
37 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gross-Thebing T |
Year: |
2017 |
Journal: |
Dev Cell |
Title: |
The Vertebrate Protein Dead End Maintains Primordial Germ Cell Fate by Inhibiting Somatic Differentiation. |
Volume: |
43 |
Issue: |
6 |
Pages: |
704-715.e5 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
Dead end protein 1 (DND1) is an RNA-binding protein that is required for the survival of primordial germ cells (PGCs) and suppresses the formation of germ-cell tumors []. DND1 binds a UU(A/U) trinucleotide motif predominantly in the 3' untranslated regions of mRNA, and destabilizes target mRNAs []. It also counteracts the function of several microRNAs (miRNAs), which are inhibitors of gene expression, by binding mRNAs and prohibiting miRNAs from associating with their target sites []. DND1 contains two RNA recognition motifs (RRMs) and a C-terminal double-stranded RNA binding motif (DSRM) that is not sequence specific, but highly specific for dsRNAs of various origin and structure.This entry represents the DSRM of DND1. |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
352
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Kasowitz SD |
Year: |
2017 |
Journal: |
Sci Rep |
Title: |
Embryonic lethality and defective male germ cell development in mice lacking UTF1. |
Volume: |
7 |
Issue: |
1 |
Pages: |
17259 |
|
•
•
•
•
•
|
Publication |
First Author: |
Aguero T |
Year: |
2017 |
Journal: |
Development |
Title: |
Maternal Dead-end 1 promotes translation of nanos1 by binding the eIF3 complex. |
Volume: |
144 |
Issue: |
20 |
Pages: |
3755-3765 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cho SJ |
Year: |
2017 |
Journal: |
Biochim Biophys Acta |
Title: |
Wip1 directly dephosphorylates NLK and increases Wnt activity during germ cell development. |
Volume: |
1863 |
Issue: |
4 |
Pages: |
1013-1022 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bhandari A |
Year: |
2013 |
Journal: |
Oncogene |
Title: |
The Grainyhead transcription factor Grhl3/Get1 suppresses miR-21 expression and tumorigenesis in skin: modulation of the miR-21 target MSH2 by RNA-binding protein DND1. |
Volume: |
32 |
Issue: |
12 |
Pages: |
1497-507 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yamaji M |
Year: |
2010 |
Journal: |
Reproduction |
Title: |
Functional reconstruction of NANOS3 expression in the germ cell lineage by a novel transgenic reporter reveals distinct subcellular localizations of NANOS3. |
Volume: |
139 |
Issue: |
2 |
Pages: |
381-93 |
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