Type |
Details |
Score |
Publication |
First Author: |
Shanghai Model Organisms Center |
Year: |
2017 |
Journal: |
MGI Direct Data Submission |
Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 1, Hugh D Campbell |
Allele Type: |
Transgenic |
Attribute String: |
Inserted expressed sequence |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
dog, domestic |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
dog, domestic |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chimpanzee |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chimpanzee |
|
•
•
•
•
•
|
Gene |
|
•
•
•
•
•
|
Gene |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
cattle |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
cattle |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chicken |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
chicken |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
macaque, rhesus |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, African clawed |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, African clawed |
|
•
•
•
•
•
|
Publication |
First Author: |
Stephens C |
Year: |
1997 |
Journal: |
J Bacteriol |
Title: |
Identification of the fliI and fliJ components of the Caulobacter flagellar type III protein secretion system. |
Volume: |
179 |
Issue: |
17 |
Pages: |
5355-65 |
|
•
•
•
•
•
|
Publication |
First Author: |
González-Pedrajo B |
Year: |
2002 |
Journal: |
Mol Microbiol |
Title: |
Molecular dissection of Salmonella FliH, a regulator of the ATPase FliI and the type III flagellar protein export pathway. |
Volume: |
45 |
Issue: |
4 |
Pages: |
967-82 |
|
•
•
•
•
•
|
Publication |
First Author: |
Minamino T |
Year: |
2000 |
Journal: |
Mol Microbiol |
Title: |
FliH, a soluble component of the type III flagellar export apparatus of Salmonella, forms a complex with FliI and inhibits its ATPase activity. |
Volume: |
37 |
Issue: |
6 |
Pages: |
1494-503 |
|
•
•
•
•
•
|
Publication |
First Author: |
Minamino T |
Year: |
2003 |
Journal: |
J Bacteriol |
Title: |
The ATPase FliI can interact with the type III flagellar protein export apparatus in the absence of its regulator, FliH. |
Volume: |
185 |
Issue: |
13 |
Pages: |
3983-8 |
|
•
•
•
•
•
|
Transgene |
Type: |
transgene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
Vogler AP |
Year: |
1991 |
Journal: |
J Bacteriol |
Title: |
Salmonella typhimurium mutants defective in flagellar filament regrowth and sequence similarity of FliI to F0F1, vacuolar, and archaebacterial ATPase subunits. |
Volume: |
173 |
Issue: |
11 |
Pages: |
3564-72 |
|
•
•
•
•
•
|
Allele |
Name: |
gene trap ROSA 26, Philippe Soriano; targeted mutation 1, Hugh D Campbell |
Allele Type: |
Targeted |
Attribute String: |
Conditional ready, Humanized sequence, Inserted expressed sequence, No functional change |
|
•
•
•
•
•
|
Publication |
First Author: |
Fan F |
Year: |
1996 |
Journal: |
J Biol Chem |
Title: |
Enzymatic characterization of FliI. An ATPase involved in flagellar assembly in Salmonella typhimurium. |
Volume: |
271 |
Issue: |
50 |
Pages: |
31981-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Minamino T |
Year: |
2009 |
Journal: |
Mol Microbiol |
Title: |
Roles of the extreme N-terminal region of FliH for efficient localization of the FliH-FliI complex to the bacterial flagellar type III export apparatus. |
Volume: |
74 |
Issue: |
6 |
Pages: |
1471-83 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jenks PJ |
Year: |
1997 |
Journal: |
FEMS Microbiol Lett |
Title: |
A flagellar-specific ATPase (FliI) is necessary for flagellar export in Helicobacter pylori. |
Volume: |
152 |
Issue: |
2 |
Pages: |
205-11 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This family represent the bacterial flagellum-specific ATP synthase, FliI, which is needed for flagellar assembly. FliI is part of the flagellar type III protein export apparatus acting as an ATPase to drive protein export for flagellar biosynthesis [, , ]. When FliI is not engaged in flagellar protein export, FliH, another flagellar type III protein export apparatus protein, functions as a negative regulator to prevent FliI from hydrolysing ATP []. It has been suggested that the N terminus of FliI interacts with FliH, while the the C-terminal domain of FliI possesses the ATPase catalytic function [, ]. The structure of the N-terminally truncated variant of FliI lacking the first 18 residues have been determinded [].This entry represents one (of three) segment of the FliI family tree. |
|
•
•
•
•
•
|
Ontology Term |
|
•
•
•
•
•
|
Publication |
First Author: |
Albertini AM |
Year: |
1991 |
Journal: |
J Bacteriol |
Title: |
The flaA locus of Bacillus subtilis is part of a large operon coding for flagellar structures, motility functions, and an ATPase-like polypeptide. |
Volume: |
173 |
Issue: |
11 |
Pages: |
3573-9 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Members of this protein family are the FliI protein of bacterial flagellum systems. FliI is an ATPase that acts to drive protein export for flagellar biosynthesis []. The most closely related family is the YscN family of bacterial type III secretion systems. This entry represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 2, Hugh D Campbell |
Allele Type: |
Transgenic |
Attribute String: |
Inserted expressed sequence |
|
•
•
•
•
•
|
Publication |
First Author: |
Minamino T |
Year: |
2006 |
Journal: |
Acta Crystallogr Sect F Struct Biol Cryst Commun |
Title: |
Crystallization and preliminary X-ray analysis of Salmonella FliI, the ATPase component of the type III flagellar protein-export apparatus. |
Volume: |
62 |
Issue: |
Pt 10 |
Pages: |
973-5 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Members of this protein family are the FliI protein of bacterial flagellum systems. This protein acts to drive protein export for flagellar biosynthesis []. The most closely related family is the YscN family of bacterial type III secretion systems. This model represents one (of three) segment of the FliI family tree. These have been modeled separately in order to exclude the type III secretion ATPases more effectively. |
|
•
•
•
•
•
|
Strain |
Attribute String: |
transgenic, mutant strain, coisogenic |
|
•
•
•
•
•
|
Strain |
Attribute String: |
transgenic, mutant strain, coisogenic |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(FLII)1Hdc/? |
Background: |
involves: BALB/cJ * C57BL/6 |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(FLII)1Hdc/Tg(FLII)1Hdc |
Background: |
involves: BALB/cJ * C57BL/6 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(FLII)2Hdc/Tg(FLII)2Hdc |
Background: |
involves: BALB/c |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu YT |
Year: |
1998 |
Journal: |
J Biol Chem |
Title: |
Identification of the binding partners for flightless I, A novel protein bridging the leucine-rich repeat and the gelsolin superfamilies. |
Volume: |
273 |
Issue: |
14 |
Pages: |
7920-7 |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, targeted mutation, transgenic |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, targeted mutation, transgenic |
|
•
•
•
•
•
|
Publication |
First Author: |
Minamino T |
Year: |
2004 |
Journal: |
J Mol Microbiol Biotechnol |
Title: |
Self-assembly and type III protein export of the bacterial flagellum. |
Volume: |
7 |
Issue: |
1-2 |
Pages: |
5-17 |
|
•
•
•
•
•
|
Publication |
First Author: |
Swietnicki W |
Year: |
2011 |
Journal: |
PLoS One |
Title: |
Identification of small-molecule inhibitors of Yersinia pestis Type III secretion system YscN ATPase. |
Volume: |
6 |
Issue: |
5 |
Pages: |
e19716 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Many flagellar proteins are exported by a flagellum-specific export pathway. Attempts have been made to characterise the apparatus responsible for this process, by designing assays to screen for mutants with export defects []. Experiments involving filament removal from temperature-sensitive flagellar mutants of Salmonella typhimurium have shown that, while most mutants were able to regrow filaments, flhA, fliH, fliI and fliN mutants showed no or greatly reduced regrowth. This suggests that the corresponding gene products are involved in the process of flagellum-specific export. The sequences of fliH, fliI and the adjacent gene, fliJ, have been deduced. FliJ was shown to encode a protein of molecular mass 17,302 Da []. It is a membrane-associated protein that affects chemotactic events, mutations in FliJ result in failure to respond to chemotactic stimuli.This subgroup is dominated by FliJ proteins found in Proteobacteria. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Proteins in this entry show extensive homology to the ATP synthase F1 beta subunit, and are involved in type III protein secretion. They fall into the two separate functional groups outlined below.The first group, exemplified by the Salmonella typhimurium FliI protein (), is needed for flagellar assembly. Most structural components of the bacterial flagellum are translocated through the central channel of the growing flagellar structure by the type III flagellar protein-export apparatus in an ATPase-driven manner, to be assembled at the growing end. FliI is the ATPase that couples ATP hydrolysis to the translocation reaction [, ].The second group couples ATP hydrolysis to protein translocation in non-flagellar type III secretion systems. Often these systems are involved in virulence and pathogenicity. YscN () from pathogenic Yersinia species, for example, energises the injection of anti host factors directly into eukaryotic cells, thus overcoming host defences [, ]. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
729
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
415
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
428
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
378
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
575
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
321
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
628
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
149
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
403
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
722
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
98
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
424
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
173
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
415
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
670
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
663
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
173
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
373
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
373
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
400
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
323
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
437
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
663
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Suriano AR |
Year: |
2005 |
Journal: |
Mol Cell Biol |
Title: |
GCF2/LRRFIP1 represses tumor necrosis factor alpha expression. |
Volume: |
25 |
Issue: |
20 |
Pages: |
9073-81 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu J |
Year: |
2005 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Identification of the Wnt signaling activator leucine-rich repeat in Flightless interaction protein 2 by a genome-wide functional analysis. |
Volume: |
102 |
Issue: |
6 |
Pages: |
1927-32 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Many flagellar proteins are exported by a flagellum-specific export pathway. Attempts have been made to characterisethe apparatus responsible for this process, by designing assays to screen for mutants with export defects.Experiments involving filament removal from temperature-sensitive flagellar mutants of Salmonella typhimurium haveshown that, while most mutants were able to regrow filaments, flhA, fliH, fliI and fliN mutants showed no or greatlyreduced regrowth. This suggests that the corresponding gene products are involved in the process of flagellum-specific export []. The sequence of fliH has been deduced and shown to encode a protein of molecular massof 25,782 Da. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Leucine-rich repeat flightless-interacting protein 1 (LRRFIP1) is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'-AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA []. It may control smooth muscle cell proliferation following artery injury through PDGFA repression and may also bind double-stranded RNA. It interacts with the leucine-rich repeat domain of human flightless-I (FliI) protein [].Leucine-rich repeat flightless-interacting protein 2 (LRRFIP2) may function as activator of the canonical Wnt signaling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin []. It positively regulates Toll-like receptor (TLR) signalling in response to agonist probably by competing with the negative FLII regulator for MYD88-binding []. |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
Mus spretus |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7462576 |
Assay Type: |
RT-PCR |
Annotation Date: |
2023-04-17 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3818719 |
|
Stage: |
TS19 |
Assay Id: |
MGI:7462621 |
Age: |
embryonic day 11.5 |
Image: |
S11 |
|
Specimen Label: |
Ect |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7462576 |
Assay Type: |
RT-PCR |
Annotation Date: |
2023-04-17 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1736119 |
|
Stage: |
TS19 |
Assay Id: |
MGI:7462621 |
Age: |
embryonic day 11.5 |
Image: |
S11 |
|
Specimen Label: |
Mes |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7462576 |
Assay Type: |
RT-PCR |
Annotation Date: |
2023-04-17 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1638517 |
|
Stage: |
TS17 |
Assay Id: |
MGI:7462646 |
Age: |
embryonic day 10.5 |
Image: |
S12 |
|
Specimen Label: |
E10.5 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7462576 |
Assay Type: |
RT-PCR |
Annotation Date: |
2023-04-17 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1735719 |
|
Stage: |
TS19 |
Assay Id: |
MGI:7462646 |
Age: |
embryonic day 11.5 |
Image: |
S12 |
|
Specimen Label: |
E11.5 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:7462576 |
Assay Type: |
RT-PCR |
Annotation Date: |
2023-04-17 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1735720 |
|
Stage: |
TS20 |
Assay Id: |
MGI:7462646 |
Age: |
embryonic day 12.5 |
Image: |
S12 |
|
Specimen Label: |
E12.5 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:4416769 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1871923 |
Pattern: |
Regionally restricted |
Stage: |
TS23 |
Assay Id: |
MGI:4826003 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_012383_01 |
|
Specimen Label: |
euxassay_012383_01 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|