| Type |
Details |
Score |
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1801023 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_11 |
|
| Specimen Label: |
euxassay_011920_11 |
| Detected: |
true |
| Specimen Num: |
11 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1801023 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_12 |
|
| Specimen Label: |
euxassay_011920_12 |
| Detected: |
true |
| Specimen Num: |
12 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1801023 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_13 |
|
| Specimen Label: |
euxassay_011920_13 |
| Detected: |
true |
| Specimen Num: |
13 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1801023 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_14 |
|
| Specimen Label: |
euxassay_011920_14 |
| Detected: |
true |
| Specimen Num: |
14 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1801023 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_15 |
|
| Specimen Label: |
euxassay_011920_15 |
| Detected: |
true |
| Specimen Num: |
15 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1801023 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_16 |
|
| Specimen Label: |
euxassay_011920_16 |
| Detected: |
true |
| Specimen Num: |
16 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1801023 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_17 |
|
| Specimen Label: |
euxassay_011920_17 |
| Detected: |
true |
| Specimen Num: |
17 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1801023 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_18 |
|
| Specimen Label: |
euxassay_011920_18 |
| Detected: |
true |
| Specimen Num: |
18 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1801023 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_19 |
|
| Specimen Label: |
euxassay_011920_19 |
| Detected: |
true |
| Specimen Num: |
19 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507271 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3267921 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:3508243 |
| Age: |
embryonic day 13.5 |
| Image: |
1 |
|
| Specimen Label: |
1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507271 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3267927 |
|
| Stage: |
TS27 |
| Assay Id: |
MGI:3508243 |
| Age: |
postnatal newborn |
| Image: |
2 |
|
| Specimen Label: |
2 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507271 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:2852723 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5540191 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:6152 |
|
| Specimen Label: |
GUDMAP:6152 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507271 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757721 |
|
| Stage: |
TS21 |
| Assay Id: |
MGI:3508243 |
| Age: |
embryonic day 13.5 |
| Image: |
1 |
|
| Specimen Label: |
1 |
| Detected: |
false |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507271 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2004-12-03 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757727 |
|
| Stage: |
TS27 |
| Assay Id: |
MGI:3508243 |
| Age: |
postnatal newborn |
| Image: |
2 |
|
| Specimen Label: |
2 |
| Detected: |
false |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1784723 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_08 |
|
| Specimen Label: |
euxassay_011920_08 |
| Detected: |
true |
| Specimen Num: |
8 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1784723 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_09 |
|
| Specimen Label: |
euxassay_011920_09 |
| Detected: |
true |
| Specimen Num: |
9 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1784723 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_10 |
|
| Specimen Label: |
euxassay_011920_10 |
| Detected: |
true |
| Specimen Num: |
10 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1784723 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_11 |
|
| Specimen Label: |
euxassay_011920_11 |
| Detected: |
true |
| Specimen Num: |
11 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1872223 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_02 |
|
| Specimen Label: |
euxassay_011920_02 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1872223 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_03 |
|
| Specimen Label: |
euxassay_011920_03 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1872223 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_16 |
|
| Specimen Label: |
euxassay_011920_16 |
| Detected: |
true |
| Specimen Num: |
16 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1872223 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_17 |
|
| Specimen Label: |
euxassay_011920_17 |
| Detected: |
true |
| Specimen Num: |
17 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3507271 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-02-07 |
| Strength: |
Present |
| Sex: |
Male |
| Emaps: |
EMAPS:2850023 |
| Pattern: |
Not Specified |
| Stage: |
TS23 |
| Assay Id: |
MGI:5540191 |
| Age: |
embryonic day 15.5 |
| Image: |
GUDMAP:6152 |
|
| Specimen Label: |
GUDMAP:6152 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3526314 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2005-02-14 |
| Strength: |
Present |
| Sex: |
Female |
| Emaps: |
EMAPS:1796221 |
| Pattern: |
Not Specified |
| Stage: |
TS21 |
| Assay Id: |
MGI:3526372 |
| Age: |
embryonic day 12.5 |
|
|
| Specimen Label: |
not shown |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1870623 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_08 |
|
| Specimen Label: |
euxassay_011920_08 |
| Detected: |
true |
| Specimen Num: |
8 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1870623 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_09 |
|
| Specimen Label: |
euxassay_011920_09 |
| Detected: |
true |
| Specimen Num: |
9 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1870623 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_10 |
|
| Specimen Label: |
euxassay_011920_10 |
| Detected: |
true |
| Specimen Num: |
10 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1870623 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_11 |
|
| Specimen Label: |
euxassay_011920_11 |
| Detected: |
true |
| Specimen Num: |
11 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4417488 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1870623 |
| Pattern: |
Uniform |
| Stage: |
TS23 |
| Assay Id: |
MGI:4825591 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_011920_12 |
|
| Specimen Label: |
euxassay_011920_12 |
| Detected: |
true |
| Specimen Num: |
12 |
|
•
•
•
•
•
|
| Publication |
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Bassett DE Jr |
| Year: |
1995 |
| Journal: |
Trends Genet |
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Comparative genomics, genome cross-referencing and XREFdb. |
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9 |
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372-3 |
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•
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•
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Mouse ING1 homologue, a protein interacting with A1, enhances cell death and is inhibited by A1 in mammary epithelial cells. |
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| Title: |
Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst. |
| Volume: |
18 |
| Issue: |
4 |
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675-85 |
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| First Author: |
Ko MS |
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2000 |
| Journal: |
Development |
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Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. |
| Volume: |
127 |
| Issue: |
8 |
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1737-49 |
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Yokoyama S |
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2009 |
| Journal: |
Dev Cell |
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A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |
| Volume: |
17 |
| Issue: |
6 |
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836-48 |
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| First Author: |
The Gene Ontology Consortium |
| Year: |
2016 |
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| Title: |
Automatic assignment of GO terms using logical inference, based on on inter-ontology links |
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| First Author: |
Gray PA |
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2004 |
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Science |
| Title: |
Mouse brain organization revealed through direct genome-scale TF expression analysis. |
| Volume: |
306 |
| Issue: |
5705 |
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2255-7 |
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| Publication |
| First Author: |
GUDMAP Consortium |
| Year: |
2004 |
| Journal: |
www.gudmap.org |
| Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
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| Publication |
| First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
| Year: |
2014 |
| Journal: |
Database Release |
| Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
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| Publication |
| First Author: |
Magdaleno S |
| Year: |
2006 |
| Journal: |
PLoS Biol |
| Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
| Volume: |
4 |
| Issue: |
4 |
| Pages: |
e86 |
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| Publication |
| First Author: |
Carninci P |
| Year: |
2005 |
| Journal: |
Science |
| Title: |
The transcriptional landscape of the mammalian genome. |
| Volume: |
309 |
| Issue: |
5740 |
| Pages: |
1559-63 |
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| Publication |
| First Author: |
Kawai J |
| Year: |
2001 |
| Journal: |
Nature |
| Title: |
Functional annotation of a full-length mouse cDNA collection. |
| Volume: |
409 |
| Issue: |
6821 |
| Pages: |
685-90 |
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| First Author: |
Adams DJ |
| Year: |
2024 |
| Journal: |
Nature |
| Title: |
Genetic determinants of micronucleus formation in vivo. |
| Volume: |
627 |
| Issue: |
8002 |
| Pages: |
130-136 |
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| First Author: |
MGD Nomenclature Committee |
| Year: |
1995 |
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| Title: |
Nomenclature Committee Use |
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•
•
•
•
•
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| Publication |
| First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
| Year: |
2011 |
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| Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
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| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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•
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| Publication |
| First Author: |
GOA curators |
| Year: |
2016 |
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| Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
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| Publication |
| First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
| Year: |
2004 |
| Journal: |
Database Release |
| Title: |
Mouse T31 Radiation Hybrid Data Load |
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•
•
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| First Author: |
Okazaki Y |
| Year: |
2002 |
| Journal: |
Nature |
| Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
| Volume: |
420 |
| Issue: |
6915 |
| Pages: |
563-73 |
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| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2010 |
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| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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| Publication |
| First Author: |
Diez-Roux G |
| Year: |
2011 |
| Journal: |
PLoS Biol |
| Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
e1000582 |
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
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| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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| Publication |
| First Author: |
MGI Genome Annotation Group and UniGene Staff |
| Year: |
2015 |
| Journal: |
Database Download |
| Title: |
MGI-UniGene Interconnection Effort |
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| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
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| Title: |
Annotation inferences using phylogenetic trees |
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•
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| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
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•
•
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| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
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•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
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| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
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| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
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| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
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•
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•
•
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
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| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
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•
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| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
167
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
Detection of novel mRNA splice variants of human ING4 tumor suppressor gene. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhang X |
| Year: |
2004 |
| Journal: |
FEBS Lett |
| Title: |
ING4 induces G2/M cell cycle arrest and enhances the chemosensitivity to DNA-damage agents in HepG2 cells. |
| Volume: |
570 |
| Issue: |
1-3 |
| Pages: |
7-12 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Raho G |
| Year: |
2007 |
| Journal: |
Oncogene |
| Title: |
Detection of novel mRNA splice variants of human ING4 tumor suppressor gene. |
| Volume: |
26 |
| Issue: |
36 |
| Pages: |
5247-57 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Kim S |
| Year: |
2004 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
A screen for genes that suppress loss of contact inhibition: identification of ING4 as a candidate tumor suppressor gene in human cancer. |
| Volume: |
101 |
| Issue: |
46 |
| Pages: |
16251-6 |
|
•
•
•
•
•
|
| Allele |
| Name: |
inhibitor of growth family, member 4; gene trap XG370, BayGenomics |
| Allele Type: |
Gene trapped |
| Attribute String: |
Null/knockout, Reporter |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
gene trap, mutant stock |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Ing4/Ing4 |
| Background: |
involves: 129P2/OlaHsd * C57BL/6 |
| Zygosity: |
hm |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Doyon Y |
| Year: |
2006 |
| Journal: |
Mol Cell |
| Title: |
ING tumor suppressor proteins are critical regulators of chromatin acetylation required for genome expression and perpetuation. |
| Volume: |
21 |
| Issue: |
1 |
| Pages: |
51-64 |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
The ePHD ("extended plant homeodomain") zinc finger is characterized as Cys2HisCys5HisCys2His. This entry represents the ePHD finger of Jade-2. Jade-2 is a homeodomain (PHD) zinc finger protein that is closely related to Jade-1, which functions as an essential regulator of multiple cell signaling pathways. Like Jade-1, Jade-2 is required for ING4 and ING5 to associate with histone acetyltransferase (HAT) HBO1 and Eaf6 to form a HBO1 complex that has a histone H4-specific acetyltransferase activity, a reduced activity toward histone H3, and is responsible for the bulk of histone H4 acetylation in vivo. Jade-2 contains a canonical PHD finger followed by this non-canonical ePHD finger, both of which are zinc-binding motifs [, ]. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
This entry represents the PHD finger of BRPF2 (also known as BRD1) [].BRPF2 is responsible for the bulk of the acetylation of H3K14 and forms a novel monocytic leukemic zinc-finger protein (MOZ)/MOZ-related factor (MORF) H3 histone acetyltransferase (HAT) complex with HBO1 and ING4 []. The complex is required for full transcriptional activation of the erythroid-specific regulator genes essential for terminal differentiation and survival of erythroblasts in fetal liver []. It contains a cysteine rich region harbouring a plant homeodomain (PHD) finger followed by a non-canonical ePHD finger, a bromodomain, and a proline-tryptophan-tryptophan-proline (PWWP) domain. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
Jade-2, also termed PHD finger protein 15 (PHF15), is a PHD ("plant homeodomain") zinc finger protein that is closely related to Jade-1, which functions as an essential regulator of multiple cell signaling pathways. Like Jade-1, Jade-2 is required for ING4 and ING5 to associate with histone acetyltransferase (HAT) HBO1 and Eaf6 to form a HBO1 complex that has a histone H4-specific acetyltransferase activity, a reduced activity toward histone H3, and is responsible for the bulk of histone H4 acetylation in vivo. Jade-2 contains a canonical Cys4HisCys3 PHD finger followed by a non-canonical extended PHD (ePHD) finger, Cys2HisCys5HisCys2His, both of which are zinc-binding motifs. This entry represents the canonical Cys4HisCys3 PHD finger [, ]. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mishima Y |
| Year: |
2011 |
| Journal: |
Blood |
| Title: |
The Hbo1-Brd1/Brpf2 complex is responsible for global acetylation of H3K14 and required for fetal liver erythropoiesis. |
| Volume: |
118 |
| Issue: |
9 |
| Pages: |
2443-53 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tzouanacou E |
| Year: |
2003 |
| Journal: |
Mol Cell Biol |
| Title: |
Identification of Jade1, a gene encoding a PHD zinc finger protein, in a gene trap mutagenesis screen for genes involved in anteroposterior axis development. |
| Volume: |
23 |
| Issue: |
23 |
| Pages: |
8553-2 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Szelei J |
| Year: |
2000 |
| Journal: |
J Steroid Biochem Mol Biol |
| Title: |
Identification of human estrogen-inducible transcripts that potentially mediate the apoptotic response in breast cancer. |
| Volume: |
72 |
| Issue: |
3-4 |
| Pages: |
89-102 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
This entry represents the ePHD finger of bromodomain and PHD finger-containing protein 2 (BRPF2), also known as bromodomain-containing protein 1 (BRD1). The extended plant homeodomain (ePHD) zinc finger is characterized as Cys2HisCys5HisCys2His. BRPF2 is responsible for the bulk of the acetylation of H3K14 and forms a novel monocytic leukemic zinc-finger protein (MOZ)/MOZ-related factor (MORF) H3 histone acetyltransferase (HAT) complex with HBO1 and ING4 []. The complex is required for full transcriptional activation of the erythroid-specific regulator genes essential for terminal differentiation and survival of erythroblasts in fetal liver []. It contains a cysteine rich region harbouring a plant homeodomain (PHD) finger followed by a non-canonical ePHD finger, a bromodomain, and a proline-tryptophan-tryptophan-proline (PWWP) domain. |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
Jade-3, also termed PHD finger protein 16 (PHF16), is a PHD ("plant homeodomain") zinc finger protein that is closely related to Jade-1, which functions as an essential regulator of multiple cell signaling pathways. Like Jade-1, Jade-3 is required for ING4 and ING5 to associate with histone acetyl transferase (HAT) HBO1 and Eaf6 to form a HBO1 complex that has a histone H4-specific acetyltransferase activity, a reduced activity toward histone H3, and is responsible for the bulk of histone H4 acetylation in vivo. Jade-3 contains a canonical Cys4HisCys3 PHD domain followed by a non-canonical extended PHD (ePHD) domain, Cys2HisCys5HisCys2His, both of which are zinc-binding motifs. This model corresponds to the canonical Cys4HisCys3 PHD finger [, ]. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhou MI |
| Year: |
2002 |
| Journal: |
J Biol Chem |
| Title: |
The von Hippel-Lindau tumor suppressor stabilizes novel plant homeodomain protein Jade-1. |
| Volume: |
277 |
| Issue: |
42 |
| Pages: |
39887-98 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zeng L |
| Year: |
2013 |
| Journal: |
Cancer Res |
| Title: |
Candidate tumor suppressor and pVHL partner Jade-1 binds and inhibits AKT in renal cell carcinoma. |
| Volume: |
73 |
| Issue: |
17 |
| Pages: |
5371-80 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zhou MI |
| Year: |
2005 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Jade-1, a candidate renal tumor suppressor that promotes apoptosis. |
| Volume: |
102 |
| Issue: |
31 |
| Pages: |
11035-40 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hunter PR |
| Year: |
1991 |
| Journal: |
J Med Vet Mycol |
| Title: |
The sub-specific numerical analysis of Candida albicans. |
| Volume: |
29 |
| Issue: |
2 |
| Pages: |
105-15 |
|
•
•
•
•
•
|