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Search results 201 to 291 out of 291 for Malat1

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Type Details Score
GXD Expression    
Probe: MGI:6197073
Assay Type: RNA in situ
Annotation Date: 2018-09-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3287428
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6197085
Age: postnatal adult
Specimen Label: 7B WT (left)
Detected: true
Specimen Num: 15
GXD Expression    
Probe: MGI:6197073
Assay Type: RNA in situ
Annotation Date: 2018-09-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3287428
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6197084
Age: postnatal adult
Specimen Label: 1C Intestine
Detected: true
Specimen Num: 9
GXD Expression    
Probe: MGI:6197073
Assay Type: RNA in situ
Annotation Date: 2018-09-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3287428
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6197084
Age: postnatal adult
Specimen Label: 2I Intestine WT
Detected: true
Specimen Num: 16
GXD Expression    
Probe: MGI:6197073
Assay Type: RNA in situ
Annotation Date: 2018-09-07
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:3287428
Stage: TS28
Assay Id: MGI:6197084
Age: postnatal adult
Note: Authors report complete loss of expression in in non-neural tissues in knock out mice.
Specimen Label: 2I Intestine KO
Detected: false
Specimen Num: 21
GXD Expression
Probe: MGI:4884570
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1609219
Pattern: Regionally restricted
Stage: TS19
Assay Id: MGI:4945533
Age: embryonic day 11.5
Image: g01064 E11.5
Note: Expression was region specific and scattered.
Specimen Label: g01064 E11.5
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:4884570
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:3266028
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:4945533
Age: postnatal day 7
Image: g01064 P7
Specimen Label: g01064 P7
Detected: true
Specimen Num: 3
GXD Expression  
Probe: MGI:4884570
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:3266028
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:4945533
Age: postnatal day 42
Image: g01064 Adult
Specimen Label: g01064 Adult
Detected: true
Specimen Num: 4
GXD Expression    
Probe: MGI:6197073
Assay Type: RNA in situ
Annotation Date: 2018-09-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3271628
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6197084
Age: postnatal adult
Specimen Label: 1C Skeletal muscle
Detected: true
Specimen Num: 6
GXD Expression  
Probe: MGI:4884570
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1754028
Pattern: Widespread
Stage: TS28
Assay Id: MGI:4945533
Age: postnatal day 7
Image: g01064 P7
Specimen Label: g01064 P7
Detected: true
Specimen Num: 3
GXD Expression  
Probe: MGI:4884570
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1754028
Pattern: Widespread
Stage: TS28
Assay Id: MGI:4945533
Age: postnatal day 42
Image: g01064 Adult
Specimen Label: g01064 Adult
Detected: true
Specimen Num: 4
GXD Expression  
Probe: MGI:4884570
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3280923
Pattern: Widespread
Stage: TS23
Assay Id: MGI:4945533
Age: embryonic day 15.5
Image: g01064 E15.5
Specimen Label: g01064 E15.5
Detected: true
Specimen Num: 2
GXD Expression
Probe: MGI:4884570
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:3280928
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:4945533
Age: postnatal day 7
Image: g01064 P7
Note: Expression was region specific and scattered.
Specimen Label: g01064 P7
Detected: true
Specimen Num: 3
GXD Expression
Probe: MGI:4884570
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3280928
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:4945533
Age: postnatal day 42
Image: g01064 Adult
Note: Expression was region specific and scattered.
Specimen Label: g01064 Adult
Detected: true
Specimen Num: 4
GXD Expression  
Probe: MGI:6191682
Assay Type: RNA in situ
Annotation Date: 2018-07-25
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3516627
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:6191693
Age: postnatal day 0
Image: 5c left
Specimen Label: 5c left
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:4884570
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3266523
Pattern: Widespread
Stage: TS23
Assay Id: MGI:4945533
Age: embryonic day 15.5
Image: g01064 E15.5
Specimen Label: g01064 E15.5
Detected: true
Specimen Num: 2
GXD Expression  
Probe: MGI:6197073
Assay Type: RNA in situ
Annotation Date: 2018-09-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1702128
Pattern: Spotted
Stage: TS28
Assay Id: MGI:6197085
Age: postnatal adult
Note: Authors report expression in speckles.
Specimen Label: 4C Stomach WT
Detected: true
Specimen Num: 3
GXD Expression      
Probe: MGI:6197073
Assay Type: RNA in situ
Annotation Date: 2018-09-07
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:1702128
Stage: TS28
Assay Id: MGI:6197085
Age: postnatal adult
Specimen Label: 4C Stomach KO
Detected: false
Specimen Num: 4
GXD Expression    
Probe: MGI:6197073
Assay Type: RNA in situ
Annotation Date: 2018-09-07
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1702128
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:6197084
Age: postnatal adult
Specimen Label: 1C Stomach
Detected: true
Specimen Num: 8
GXD Expression  
Probe: MGI:6191682
Assay Type: RNA in situ
Annotation Date: 2018-07-25
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3579927
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:6191693
Age: postnatal day 0
Image: 5c left
Specimen Label: 5c left
Detected: true
Specimen Num: 1
GXD Expression
Probe: MGI:3068228
Assay Type: RNA in situ
Annotation Date: 2011-10-13
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1619112
Pattern: Regionally restricted
Stage: TS12
Assay Id: MGI:5291713
Age: embryonic day 8.0
Image: E8.0
Note: Expression is stronger in the posterior notochord than elsewhere in the embryo.
Specimen Label: E8.0
Detected: true
Specimen Num: 1
GXD Expression  
Probe: MGI:4884570
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1757723
Pattern: Widespread
Stage: TS23
Assay Id: MGI:4945533
Age: embryonic day 15.5
Image: g01064 E15.5
Specimen Label: g01064 E15.5
Detected: true
Specimen Num: 2
GXD Expression
Probe: MGI:4884570
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:1757728
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:4945533
Age: postnatal day 7
Image: g01064 P7
Note: Expression was region specific and scattered.
Specimen Label: g01064 P7
Detected: true
Specimen Num: 3
GXD Expression  
Probe: MGI:4884570
Assay Type: RNA in situ
Annotation Date: 2011-04-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1757728
Pattern: Widespread
Stage: TS28
Assay Id: MGI:4945533
Age: postnatal day 42
Image: g01064 Adult
Specimen Label: g01064 Adult
Detected: true
Specimen Num: 4
GXD Expression    
Probe: MGI:3609715
Assay Type: RNA in situ
Annotation Date: 2006-01-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689422
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:3610113
Age: embryonic day 14.5
Specimen Label: None
Detected: true
Specimen Num: 1
GXD Expression    
Probe: MGI:3609715
Assay Type: RNA in situ
Annotation Date: 2006-01-16
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689424
Pattern: Not Specified
Stage: TS24
Assay Id: MGI:3610113
Age: embryonic day 16.5
Specimen Label: None
Detected: true
Specimen Num: 2
GXD Expression
Probe: MGI:6191682
Assay Type: RNA in situ
Annotation Date: 2018-07-25
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3582727
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:6191693
Age: postnatal day 0
Image: 5c left
Note: More highly expressed.
Specimen Label: 5c left
Detected: true
Specimen Num: 1
Publication
First Author: Li Y
Year: 2020
Journal: Nat Commun
Title: Long noncoding RNA SAM promotes myoblast proliferation through stabilizing Sugt1 and facilitating kinetochore assembly.
Volume: 11
Issue: 1
Pages: 2725
Publication
First Author: Tkatchenko TV
Year: 2009
Journal: Physiol Genomics
Title: Lack of periostin leads to suppression of Notch1 signaling and calcific aortic valve disease.
Volume: 39
Issue: 3
Pages: 160-8
Publication
First Author: Tamplin OJ
Year: 2011
Journal: Dev Biol
Title: Integrated microarray and ChIP analysis identifies multiple Foxa2 dependent target genes in the notochord.
Volume: 360
Issue: 2
Pages: 415-25
Publication  
First Author: Yang J
Year: 2022
Journal: Front Genet
Title: Identifying key m(6)A-methylated lncRNAs and genes associated with neural tube defects via integrative MeRIP and RNA sequencing analyses.
Volume: 13
Pages: 974357
Publication
First Author: Yue Y
Year: 2023
Journal: Exp Cell Res
Title: Lnc-Malat1 promotes slow myofiber-type transformation through sponging miR-129-5p in C2C12 myotubes.
Volume: 431
Issue: 1
Pages: 113761
Publication  
First Author: Li L
Year: 2019
Journal: iScience
Title: Histone Deacetylase 3 Governs Perinatal Cerebral Development via Neural Stem and Progenitor Cells.
Volume: 20
Pages: 148-167
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2001
Title: Gene Ontology Annotation by the MGI Curatorial Staff
Publication
First Author: Jensen P
Year: 2004
Journal: Brain Res Mol Brain Res
Title: A neurogenomics approach to gene expression analysis in the developing brain.
Volume: 132
Issue: 2
Pages: 116-27
Publication  
First Author: Hutchinson JN
Year: 2007
Journal: BMC Genomics
Title: A screen for nuclear transcripts identifies two linked noncoding RNAs associated with SC35 splicing domains.
Volume: 8
Pages: 39
Publication
First Author: Nakagawa S
Year: 2011
Journal: J Cell Biol
Title: Paraspeckles are subpopulation-specific nuclear bodies that are not essential in mice.
Volume: 193
Issue: 1
Pages: 31-9
Publication      
First Author: International Mouse Strain Resource
Year: 2014
Journal: Database Download
Title: MGI download of germline transmission data for alleles from IMSR strain data
Publication
First Author: Zhao J
Year: 2010
Journal: Mol Cell
Title: Genome-wide identification of polycomb-associated RNAs by RIP-seq.
Volume: 40
Issue: 6
Pages: 939-53
Publication
First Author: Ushakov K
Year: 2017
Journal: Sci Rep
Title: Genome-wide identification and expression profiling of long non-coding RNAs in auditory and vestibular systems.
Volume: 7
Issue: 1
Pages: 8637
Publication
First Author: Ishizuka A
Year: 2014
Journal: Genes Cells
Title: Formation of nuclear bodies by the lncRNA Gomafu-associating proteins Celf3 and SF1.
Volume: 19
Issue: 9
Pages: 704-21
Publication
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
Publication
First Author: Friedel RH
Year: 2007
Journal: Brief Funct Genomic Proteomic
Title: EUCOMM--the European conditional mouse mutagenesis program.
Volume: 6
Issue: 3
Pages: 180-5
Publication      
First Author: Shanghai Model Organisms Center
Year: 2017
Journal: MGI Direct Data Submission
Title: Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China
Publication
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
Publication      
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
Publication
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
Publication        
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
Publication
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
Publication        
First Author: Cyagen Biosciences Inc.
Year: 2022
Title: Cyagen Biosciences Website.
Publication      
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
Publication      
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
Publication
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
Publication      
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
Publication
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
Publication      
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
Publication      
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
Publication        
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
Publication      
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
Publication        
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
HT Experiment  
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
Allele
Name: metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA); targeted mutation 1.2, David L Spector
Allele Type: Targeted
Attribute String: Null/knockout
HT Experiment
Series Id: GSE37706
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
Publication
First Author: Zhao G
Year: 2016
Journal: FEBS Lett
Title: The long noncoding RNA MALAT1 regulates the lipopolysaccharide-induced inflammatory response through its interaction with NF-κB.
Volume: 590
Issue: 17
Pages: 2884-95
Publication
First Author: Voce DJ
Year: 2019
Journal: Cancer Res
Title: Temozolomide Treatment Induces lncRNA MALAT1 in an NF-κB and p53 Codependent Manner in Glioblastoma.
Volume: 79
Issue: 10
Pages: 2536-2548
Publication
First Author: Li X
Year: 2017
Journal: Exp Cell Res
Title: Long noncoding RNA MALAT1 regulates renal tubular epithelial pyroptosis by modulated miR-23c targeting of ELAVL1 in diabetic nephropathy.
Volume: 350
Issue: 2
Pages: 327-335
Allele
Name: metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA); endonuclease-mediated mutation 1, Shanghai Model Organisms Center
Allele Type: Endonuclease-mediated
Attribute String: Null/knockout
Publication
First Author: Brown JA
Year: 2016
Journal: Proc Natl Acad Sci U S A
Title: Methyltransferase-like protein 16 binds the 3'-terminal triple helix of MALAT1 long noncoding RNA.
Volume: 113
Issue: 49
Pages: 14013-14018
Strain
Attribute String: coisogenic, endonuclease-mediated mutation, mutant strain
Allele
Name: metastasis associated lung adenocarcinoma transcript 1 (non-coding RNA); targeted mutation 1, Shanghai Model Organisms Center
Allele Type: Targeted
Attribute String: Conditional ready, No functional change
DO Term
Strain
Attribute String: coisogenic, mutant strain, targeted mutation
Protein
Organism: Mus musculus/domesticus
Length: 33  
Fragment?: true
Publication
First Author: Sergiev PV
Year: 2008
Journal: J Mol Biol
Title: The ybiN gene of Escherichia coli encodes adenine-N6 methyltransferase specific for modification of A1618 of 23 S ribosomal RNA, a methylated residue located close to the ribosomal exit tunnel.
Volume: 375
Issue: 1
Pages: 291-300
Protein Domain
Type: Family
Description: This family includes ribosomal RNA large subunit methyltransferase F (RlmF), and related proteins, including methyltransferase-like protein 16 (METTL16). METTL16 is a conserved RNA methyltransferase which interacts specifically with the MALAT1 triple helix. METTL16 shows nuclear localisation []. Another functional study indicates that METTL16 regulates expression of human MAT2A, which encodes the SAM synthetase expressed in most cells. Furthermore, results indicate that METTL16 is the long-unknown methyltransferase for the U6 spliceosomal small nuclear RNA (snRNA) and it has evolved an additional function in vertebrates to control SAM homeostasis by post-transcriptionally regulating SAM synthetase gene expression [].RlmF methylates the adenine in position 1618 of 23S rRNA []. This family also includes psilocybin synthase (PsiM), which is a methyltransferase involved in the biosynthesis of the psychotropic agent psilocybin from the mushroom Psilocybe cubensis [].
Publication
First Author: Pendleton KE
Year: 2017
Journal: Cell
Title: The U6 snRNA m6A Methyltransferase METTL16 Regulates SAM Synthetase Intron Retention.
Volume: 169
Issue: 5
Pages: 824-835.e14
Publication
First Author: You ZP
Year: 2018
Journal: Invest Ophthalmol Vis Sci
Title: Bioinformatics Analysis of Weighted Genes in Diabetic Retinopathy.
Volume: 59
Issue: 13
Pages: 5558-5563
Publication
First Author: Xu W
Year: 2013
Journal: Int J Mol Sci
Title: Differential expression of genes associated with the progression of renal disease in the kidneys of liver-specific glucokinase gene knockout mice.
Volume: 14
Issue: 3
Pages: 6467-86
Publication
First Author: Deschepper CF
Year: 2020
Journal: Sci Rep
Title: Regulatory effects of the Uty/Ddx3y locus on neighboring chromosome Y genes and autosomal mRNA transcripts in adult mouse non-reproductive cells.
Volume: 10
Issue: 1
Pages: 14900
Publication
First Author: Pirie E
Year: 2018
Journal: PLoS Genet
Title: Mouse genome-wide association studies and systems genetics uncover the genetic architecture associated with hepatic pharmacokinetic and pharmacodynamic properties of a constrained ethyl antisense oligonucleotide targeting Malat1.
Volume: 14
Issue: 10
Pages: e1007732
Publication
First Author: Kandasamy P
Year: 2022
Journal: Nucleic Acids Res
Title: Impact of guanidine-containing backbone linkages on stereopure antisense oligonucleotides in the CNS.
Volume: 50
Issue: 10
Pages: 5401-5423
Publication
First Author: Fei J
Year: 2017
Journal: J Cell Sci
Title: Quantitative analysis of multilayer organization of proteins and RNA in nuclear speckles at super resolution.
Volume: 130
Issue: 24
Pages: 4180-4192
Publication
First Author: Yan W
Year: 2017
Journal: Sci Rep
Title: MiR-503 modulates epithelial-mesenchymal transition in silica-induced pulmonary fibrosis by targeting PI3K p85 and is sponged by lncRNA MALAT1.
Volume: 7
Issue: 1
Pages: 11313
Publication
First Author: Fricke J
Year: 2017
Journal: Angew Chem Int Ed Engl
Title: Enzymatic Synthesis of Psilocybin.
Volume: 56
Issue: 40
Pages: 12352-12355
Protein
Organism: Mus musculus/domesticus
Length: 553  
Fragment?: false
Protein
Organism: Mus musculus/domesticus
Length: 215  
Fragment?: false
Protein
Organism: Mus musculus/domesticus
Length: 593  
Fragment?: false