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Search results 201 to 300 out of 304 for Mbd4

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Type Details Score
Publication
15953540 | J:99372
First Author: van der Zwaag B
Year: 2005
Journal: Genomics
Title: Identifying new candidate genes for hereditary facial paresis on chromosome 3q21-q22 by RNA in situ hybridization in mouse.
Volume: 86
Issue: 1
Pages: 55-67
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Publication
20300987 | J:161421
 
First Author: Mann W
Year: 2010
Journal: Methods Mol Biol
Title: Single cell RT-PCR on mouse embryos: a general approach for developmental biology.
Volume: 630
Pages: 3-12
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Publication
18784354 | J:145796
First Author: May A
Year: 2009
Journal: Biol Reprod
Title: Multiplex rt-PCR expression analysis of developmentally important genes in individual mouse preimplantation embryos and blastomeres.
Volume: 80
Issue: 1
Pages: 194-202
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Publication
23920106 | J:202864
First Author: Keil KP
Year: 2013
Journal: Gene Expr Patterns
Title: Catalog of mRNA expression patterns for DNA methylating and demethylating genes in developing mouse lower urinary tract.
Volume: 13
Issue: 8
Pages: 413-24
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Publication
30186101 | J:266522
 
First Author: Elsen GE
Year: 2018
Journal: Front Neurosci
Title: The Epigenetic Factor Landscape of Developing Neocortex Is Regulated by Transcription Factors Pax6→ Tbr2→ Tbr1.
Volume: 12
Pages: 571
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Publication
- | J:73065
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2001
Title: Gene Ontology Annotation by the MGI Curatorial Staff
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Publication
34321999 | J:313619
 
First Author: Bedogni F
Year: 2021
Journal: Front Mol Neurosci
Title: Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development.
Volume: 14
Pages: 686034
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
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Publication
16602821 | J:162220
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:326541
       
First Author: Cyagen Biosciences Inc.
Year: 2022
Title: Cyagen Biosciences Website.
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:57747
     
First Author: MGI Genome Annotation Group and UniGene Staff
Year: 2015
Journal: Database Download
Title: MGI-UniGene Interconnection Effort
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
28542810 | J:244809
First Author: Wang S
Year: 2017
Journal: FEBS Lett
Title: DNMT1 cooperates with MBD4 to inhibit the expression of Glucocorticoid-induced TNFR-related protein in human T cells.
Volume: 591
Issue: 13
Pages: 1929-1939
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Publication
20068036 | J:233575
First Author: Röhrl J
Year: 2010
Journal: J Biol Chem
Title: Specific binding and chemotactic activity of mBD4 and its functional orthologue hBD2 to CCR6-expressing cells.
Volume: 285
Issue: 10
Pages: 7028-34
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Interaction Experiment
Meng H (2014)
Description: MBD4 Interacts with and Recruits USP7 to heterochromatic foci.
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Publication
25358258 | -
First Author: Meng H
Year: 2015
Journal: J Cell Biochem
Title: MBD4 interacts with and recruits USP7 to heterochromatic foci.
Volume: 116
Issue: 3
Pages: 476-85
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Publication
10499592 | -
First Author: Hendrich B
Year: 1999
Journal: Nature
Title: The thymine glycosylase MBD4 can bind to the product of deamination at methylated CpG sites.
Volume: 401
Issue: 6750
Pages: 301-4
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Allele
Mbd4/Ift122<tm1Abc> | MGI:2684311
Name: methyl-CpG binding domain protein 4; targeted mutation 1, Alfonso Bellacosa
Allele Type: Targeted
Attribute String: Null/knockout
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Allele
Tg(Mbd4-EGFP)DI39Gsat | MGI:4847224
Name: transgene insertion DI39, GENSAT Project at Rockefeller University
Allele Type: Transgenic
Attribute String: Reporter
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Strain
MGI:4888409 | B6.129-Mbd4/Ift122<tm1Abc>
Attribute String: congenic, mutant strain, targeted mutation
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Strain
MGI:5003629 | STOCK Tg(Mbd4-EGFP)DI39Gsat/Mmucd
Attribute String: mutant stock, transgenic
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Genotype
Genotype
Symbol: Mbd4/Ift122/Mbd4/Ift122
Background: either: (involves: 129S1/Sv * C57BL/6) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6)
Zygosity: hm
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Mbd4/Ift122/Mbd4<+>
Background: B6.129-Mbd4/Ift122
Zygosity: ht
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Mbd4/Ift122/Mbd4/Ift122
Background: B6.129-Mbd4/Ift122
Zygosity: hm
Has Mutant Allele: true
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Publication
23670560 | J:199719
First Author: Kolar SS
Year: 2013
Journal: Infect Immun
Title: Protective role of murine β-defensins 3 and 4 and cathelin-related antimicrobial peptide in Fusarium solani keratitis.
Volume: 81
Issue: 8
Pages: 2669-77
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Publication
12504854 | J:80802
First Author: Jiang CL
Year: 2002
Journal: Genomics
Title: MBD3L1 and MBD3L2, two new proteins homologous to the methyl-CpG-binding proteins MBD2 and MBD3: characterization of MBD3L1 as a testis-specific transcriptional repressor.
Volume: 80
Issue: 6
Pages: 621-9
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Publication
19933858 | J:157484
First Author: Wu M
Year: 2009
Journal: J Immunol
Title: Beta-defensins 2 and 3 together promote resistance to Pseudomonas aeruginosa keratitis.
Volume: 183
Issue: 12
Pages: 8054-60
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Publication
21745813 | J:183034
First Author: Pettersen HS
Year: 2011
Journal: Nucleic Acids Res
Title: UNG-initiated base excision repair is the major repair route for 5-fluorouracil in DNA, but 5-fluorouracil cytotoxicity depends mainly on RNA incorporation.
Volume: 39
Issue: 19
Pages: 8430-44
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Publication
12529184 | -
First Author: Roloff TC
Year: 2003
Journal: BMC Genomics
Title: Comparative study of methyl-CpG-binding domain proteins.
Volume: 4
Issue: 1
Pages: 1
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Protein Domain
IPR001739 | Methyl_CpG_DNA-bd
Type: Domain
Description: Methylation at CpG dinucleotide, the most common DNA modification ineukaryotes, has been correlated with gene silencing associated with variousphenomena such as genomic imprinting, transposon and chromosome X inactivation, differentiation, and cancer. Effects of DNA methylation are mediated through proteins which bind to symmetrically methylated CpGs. Such proteins contain a specific domain of ~70 residues, the methyl-CpG-binding domain (MBD), which is linked to additional domains associated with chromatin, such as the bromodomain, the AT hook motif,the SET domain, or the PHD finger. MBD-containing proteins appear to act as structural proteins, which recruit a variety of histone deacetylase (HDAC) complexes and chromatin remodelling factors, leading to chromatin compaction and, consequently, to transcriptional repression. The MBD of MeCP2, MBD1, MBD2, MBD4 and BAZ2 mediates binding to DNA, in case of MeCP2, MBD1 and MBD2 preferentially to methylated CpG. In case of human MBD3 and SETDB1 the MBD has been shown to mediate protein-protein interactions [, ].The MBD folds into an alpha/beta sandwich structure comprising a layer oftwisted beta sheet, backed by another layer formed by the alpha1 helix and ahairpin loop at the C terminus. These layers are both amphipathic, with the alpha1 helix and the beta sheet lying parallel and the hydrophobic faces tightly packed against each other. The beta sheet is composed of two long inner strands (beta2 and beta3) sandwiched by two shorter outer strands (beta1 and beta4) [].
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Publication
17590428 | J:125801
First Author: Sousa MM
Year: 2007
Journal: Mol Aspects Med
Title: DNA-uracil and human pathology.
Volume: 28
Issue: 3-4
Pages: 276-306
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Protein
B1AYB6
Organism: Mus musculus/domesticus
Length: 1498  
Fragment?: false
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Protein
Q3TU27
Organism: Mus musculus/domesticus
Length: 365  
Fragment?: false
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Protein
Q69ZJ2
Organism: Mus musculus/domesticus
Length: 1753  
Fragment?: true
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Protein
A0A0N4SWA0
Organism: Mus musculus/domesticus
Length: 386  
Fragment?: false
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Protein
Q3UG18
Organism: Mus musculus/domesticus
Length: 386  
Fragment?: false
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Protein
B4XVP4
Organism: Mus musculus/domesticus
Length: 241  
Fragment?: false
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Protein
B1AYB5
Organism: Mus musculus/domesticus
Length: 1728  
Fragment?: false
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Protein
Q8BUR7
Organism: Mus musculus/domesticus
Length: 102  
Fragment?: true
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Protein
Q9Z2D8
Organism: Mus musculus/domesticus
Length: 285  
Fragment?: false
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Protein
Q9Z2E1
Organism: Mus musculus/domesticus
Length: 414  
Fragment?: false
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Protein
Q9Z2D6
Organism: Mus musculus/domesticus
Length: 484  
Fragment?: false
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Protein
Q3TY92
Organism: Mus musculus/domesticus
Length: 1003  
Fragment?: false
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Protein
D3YY81
Organism: Mus musculus/domesticus
Length: 172  
Fragment?: false
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Protein
D3YV97
Organism: Mus musculus/domesticus
Length: 130  
Fragment?: true
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Protein
Q8BRP6
Organism: Mus musculus/domesticus
Length: 181  
Fragment?: true
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Protein
D3Z7U4
Organism: Mus musculus/domesticus
Length: 189  
Fragment?: false
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Protein
D3YTR5
Organism: Mus musculus/domesticus
Length: 261  
Fragment?: false
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Protein
Q3V0H2
Organism: Mus musculus/domesticus
Length: 764  
Fragment?: true
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Protein
B1AYB7
Organism: Mus musculus/domesticus
Length: 856  
Fragment?: false
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Protein
E9Q572
Organism: Mus musculus/domesticus
Length: 1005  
Fragment?: false
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Protein
D3YTR4
Organism: Mus musculus/domesticus
Length: 281  
Fragment?: false
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Protein
A0A1W2P6L0
Organism: Mus musculus/domesticus
Length: 763  
Fragment?: true
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Protein
Q8CGH2
Organism: Mus musculus/domesticus
Length: 769  
Fragment?: true
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Protein
Q05CX2
Organism: Mus musculus/domesticus
Length: 706  
Fragment?: true
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Protein
Q80VL8
Organism: Mus musculus/domesticus
Length: 709  
Fragment?: true
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Publication
12787239 | -
First Author: Zemach A
Year: 2003
Journal: Plant J
Title: Characterization of Arabidopsis thaliana methyl-CpG-binding domain (MBD) proteins.
Volume: 34
Issue: 5
Pages: 565-72
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Protein
Q9Z2E2
Organism: Mus musculus/domesticus
Length: 636  
Fragment?: false
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Protein
A0A286YDI1
Organism: Mus musculus/domesticus
Length: 644  
Fragment?: false
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Protein
A0A0R4J159
Organism: Mus musculus/domesticus
Length: 588  
Fragment?: false
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Protein
A0A5F8MPN9
Organism: Mus musculus/domesticus
Length: 613  
Fragment?: false
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Protein
Q69ZI8
Organism: Mus musculus/domesticus
Length: 1369  
Fragment?: true
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Protein
Q3TRE4
Organism: Mus musculus/domesticus
Length: 298  
Fragment?: false
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Protein
Q8C267
Organism: Mus musculus/domesticus
Length: 713  
Fragment?: false
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Protein
B2RXP3
Organism: Mus musculus/domesticus
Length: 697  
Fragment?: false
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Protein
B4XVN8
Organism: Mus musculus/domesticus
Length: 697  
Fragment?: false
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Protein
B4XVP0
Organism: Mus musculus/domesticus
Length: 675  
Fragment?: false
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Protein
B4XVP8
Organism: Mus musculus/domesticus
Length: 503  
Fragment?: false
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Protein
B4XVN9
Organism: Mus musculus/domesticus
Length: 697  
Fragment?: false
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Protein
B4XVP5
Organism: Mus musculus/domesticus
Length: 525  
Fragment?: false
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Protein
B4XVN7
Organism: Mus musculus/domesticus
Length: 697  
Fragment?: false
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Protein
B4XVP1
Organism: Mus musculus/domesticus
Length: 675  
Fragment?: false
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Protein
Q91YE5
Organism: Mus musculus/domesticus
Length: 1889  
Fragment?: false
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Protein
A2AUY4
Organism: Mus musculus/domesticus
Length: 2123  
Fragment?: false
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Protein
O88974
Organism: Mus musculus/domesticus
Length: 1307  
Fragment?: false
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Protein
E9Q374
Organism: Mus musculus/domesticus
Length: 1888  
Fragment?: false
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Protein
A0A1W2P6X9
Organism: Mus musculus/domesticus
Length: 1890  
Fragment?: false
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Protein
G5E8N3
Organism: Mus musculus/domesticus
Length: 1307  
Fragment?: false
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Protein
B4XVP6
Organism: Mus musculus/domesticus
Length: 871  
Fragment?: false
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Protein
A0A5F8MPQ7
Organism: Mus musculus/domesticus
Length: 1889  
Fragment?: false
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

© 2002 - 2017 Department of Genetics, University of Cambridge, Downing Street,
Cambridge CB2 3EH, United Kingdom