Type |
Details |
Score |
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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|
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•
•
•
•
•
|
UniProt Feature |
Begin: |
2 |
Description: |
Cytoplasmic protein NCK1 |
Type: |
chain |
End: |
377 |
|
•
•
•
•
•
|
Publication |
First Author: |
He B |
Year: |
2013 |
Journal: |
PLoS One |
Title: |
A remote cis-acting variant at 3q links glomerular NCK1 to diabetic nephropathy. |
Volume: |
8 |
Issue: |
2 |
Pages: |
e56414 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kefalas G |
Year: |
2018 |
Journal: |
J Biol Chem |
Title: |
Peptide-based sequestration of the adaptor protein Nck1 in pancreatic β cells enhances insulin biogenesis and protects against diabetogenic stresses. |
Volume: |
293 |
Issue: |
32 |
Pages: |
12516-12524 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mukherjee C |
Year: |
2014 |
Journal: |
PLoS Biol |
Title: |
The cytoplasmic capping complex assembles on adapter protein nck1 bound to the proline-rich C-terminus of Mammalian capping enzyme. |
Volume: |
12 |
Issue: |
8 |
Pages: |
e1001933 |
|
•
•
•
•
•
|
Allele |
Name: |
non-catalytic region of tyrosine kinase adaptor protein 1; endonuclease-mediated mutation 2, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Publication |
First Author: |
Ger M |
Year: |
2011 |
Journal: |
Cell Signal |
Title: |
Adaptor protein Nck1 interacts with p120 Ras GTPase-activating protein and regulates its activity. |
Volume: |
23 |
Issue: |
10 |
Pages: |
1651-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Miyamoto Y |
Year: |
2004 |
Journal: |
J Biol Chem |
Title: |
The adaptor protein Nck1 mediates endothelin A receptor-regulated cell migration through the Cdc42-dependent c-Jun N-terminal kinase pathway. |
Volume: |
279 |
Issue: |
33 |
Pages: |
34336-42 |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
•
•
•
•
•
|
Allele |
Name: |
non-catalytic region of tyrosine kinase adaptor protein 1; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Conditional ready, No functional change |
|
•
•
•
•
•
|
Publication |
First Author: |
Ito N |
Year: |
1998 |
Journal: |
J Biol Chem |
Title: |
Identification of vascular endothelial growth factor receptor-1 tyrosine phosphorylation sites and binding of SH2 domain-containing molecules. |
Volume: |
273 |
Issue: |
36 |
Pages: |
23410-8 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
Cytoplasmic proteins Nck are non-enzymatic adaptor proteins composed of three SH3 (Src homology 3) domains and a C-terminal SH2 domain []. They regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates []. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics []. They associate with tyrosine-phosphorylated growth factor receptors or their cellular substrates [, ]. There are two vertebrate Nck proteins, Nck1 and Nck2. Nck1 (also called Nck-alpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling []. It binds and activates RasGAP, resulting in the downregulation of Ras []. It is also involved in the signaling of endothilin-mediated inhibition of cell migration [].This entry represents the SH2 domain of Nck1. |
|
•
•
•
•
•
|
Publication |
First Author: |
Goicoechea SM |
Year: |
2002 |
Journal: |
Int J Biochem Cell Biol |
Title: |
Nck-2 interacts with focal adhesion kinase and modulates cell motility. |
Volume: |
34 |
Issue: |
7 |
Pages: |
791-805 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tu Y |
Year: |
1998 |
Journal: |
Mol Biol Cell |
Title: |
Nck-2, a novel Src homology2/3-containing adaptor protein that interacts with the LIM-only protein PINCH and components of growth factor receptor kinase-signaling pathways. |
Volume: |
9 |
Issue: |
12 |
Pages: |
3367-82 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Cytoplasmic protein NCK2 (NCK2) is a non-enzymatic adaptor protein composed of three SH3 (Src homology 3) domains and a C-terminal SH2 domain. There are two vertebrate NCK proteins, NCK1 and NCK2. NCK2 mediates Slit-induced cortical neurite outgrowth []. NCK2 interacts with focal adhesion kinase (FAK) and this interaction suggests a role of NCK2 in the modulation of cell motility []. It also interacts with DOCK1 [], LIMS1 []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
Cytoplasmic proteins Nck are non-enzymatic adaptor proteins composed of three SH3 (Src homology 3) domains and a C-terminal SH2 domain []. They regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates []. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics []. They associate with tyrosine-phosphorylated growth factor receptors or their cellular substrates [, ]. There are two vertebrate Nck proteins, Nck1 and Nck2. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
Cytoplasmic proteins Nck are non-enzymatic adaptor proteins composed of three SH3 (Src homology 3) domains and a C-terminal SH2 domain []. They regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates []. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics []. They associate with tyrosine-phosphorylated growth factor receptors or their cellular substrates [, ]. There are two vertebrate Nck proteins, Nck1 and Nck2. This entry represents the SH2 domain of Nck2. |
|
•
•
•
•
•
|
Publication |
First Author: |
Tu Y |
Year: |
2001 |
Journal: |
FEBS Lett |
Title: |
Identification and kinetic analysis of the interaction between Nck-2 and DOCK180. |
Volume: |
491 |
Issue: |
3 |
Pages: |
193-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Oser M |
Year: |
2010 |
Journal: |
J Cell Sci |
Title: |
Specific tyrosine phosphorylation sites on cortactin regulate Nck1-dependent actin polymerization in invadopodia. |
Volume: |
123 |
Issue: |
Pt 21 |
Pages: |
3662-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
Matuoka K |
Year: |
1997 |
Journal: |
Biochem Biophys Res Commun |
Title: |
A novel ligand for an SH3 domain of the adaptor protein Nck bears an SH2 domain and nuclear signaling motifs. |
Volume: |
239 |
Issue: |
2 |
Pages: |
488-92 |
|
•
•
•
•
•
|
Publication |
First Author: |
Buday L |
Year: |
2002 |
Journal: |
Cell Signal |
Title: |
The Nck family of adapter proteins: regulators of actin cytoskeleton. |
Volume: |
14 |
Issue: |
9 |
Pages: |
723-31 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dubrac A |
Year: |
2018 |
Journal: |
Nat Commun |
Title: |
NCK-dependent pericyte migration promotes pathological neovascularization in ischemic retinopathy. |
Volume: |
9 |
Issue: |
1 |
Pages: |
3463 |
|
•
•
•
•
•
|
Publication |
First Author: |
Magalhaes MA |
Year: |
2011 |
Journal: |
J Cell Biol |
Title: |
Cortactin phosphorylation regulates cell invasion through a pH-dependent pathway. |
Volume: |
195 |
Issue: |
5 |
Pages: |
903-20 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jiang H |
Year: |
2019 |
Journal: |
Elife |
Title: |
Entry by multiple picornaviruses is dependent on a pathway that includes TNK2, WASL, and NCK1. |
Volume: |
8 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Xu NJ |
Year: |
2009 |
Journal: |
Nat Neurosci |
Title: |
Ephrin-B3 reverse signaling through Grb4 and cytoskeletal regulators mediates axon pruning. |
Volume: |
12 |
Issue: |
3 |
Pages: |
268-76 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represent the first SH3 domain of Nck2. It binds the PxxDY sequence in the CD3e cytoplasmic tail; this binding inhibits phosphorylation by Src kinases, resulting in the downregulation of TCR surface expression []. Nck2 (also known as Grb4) is a member of the Nck family. It plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling []. It binds neuronal signaling proteins such as ephrinB []. Cytoplasmic proteins Nck are non-enzymatic adaptor proteins composed of three SH3 (Src homology 3) domains and a C-terminal SH2 domain []. They regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates []. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics []. They associate with tyrosine-phosphorylated growth factor receptors or their cellular substrates [, ]. There are two vertebrate Nck proteins, Nck1 and Nck2. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represent the second SH3 domain of Nck2. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif []. Nck2 (also known as Grb4) is a member of the Nck family. It plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling []. It binds neuronal signaling proteins such as ephrinB []. Cytoplasmic proteins Nck are non-enzymatic adaptor proteins composed of three SH3 (Src homology 3) domains and a C-terminal SH2 domain []. They regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates []. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics []. They associate with tyrosine-phosphorylated growth factor receptors or their cellular substrates [, ]. There are two vertebrate Nck proteins, Nck1 and Nck2. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represent the third SH3 domain of Nck2. The third SH3 domain of Nck appears to prefer ligands with a PxAPxR motif [].Nck2 (also known as Grb4) is a member of the Nck family. It plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling []. It binds neuronal signaling proteins such as ephrinB []. Cytoplasmic proteins Nck are non-enzymatic adaptor proteins composed of three SH3 (Src homology 3) domains and a C-terminal SH2 domain []. They regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates []. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics []. They associate with tyrosine-phosphorylated growth factor receptors or their cellular substrates [, ]. There are two vertebrate Nck proteins, Nck1 and Nck2. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represent the second SH3 domain of Nck1. The second SH3 domain of Nck appears to prefer ligands containing the APxxPxR motif [].Nck1 (also called Nck-alpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling []. It binds and activates RasGAP, resulting in the downregulation of Ras []. It is also involved in the signaling of endothilin-mediated inhibition of cell migration [].Cytoplasmic proteins Nck are non-enzymatic adaptor proteins composed of three SH3 (Src homology 3) domains and a C-terminal SH2 domain []. They regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates []. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics []. They associate with tyrosine-phosphorylated growth factor receptors or their cellular substrates [, ]. There are two vertebrate Nck proteins, Nck1 and Nck2. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represent the third SH3 domain of Nck1. The third SH3 domain of Nck appears to prefer ligands with a PxAPxR motif [].Nck1 (also called Nck-alpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling []. It binds and activates RasGAP, resulting in the downregulation of Ras []. It is also involved in the signaling of endothilin-mediated inhibition of cell migration [].Cytoplasmic proteins Nck are non-enzymatic adaptor proteins composed of three SH3 (Src homology 3) domains and a C-terminal SH2 domain []. They regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates []. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics []. They associate with tyrosine-phosphorylated growth factor receptors or their cellular substrates [, ]. There are two vertebrate Nck proteins, Nck1 and Nck2. |
|
•
•
•
•
•
|
Publication |
First Author: |
Takeuchi K |
Year: |
2008 |
Journal: |
J Mol Biol |
Title: |
Structural and functional evidence that Nck interaction with CD3epsilon regulates T-cell receptor activity. |
Volume: |
380 |
Issue: |
4 |
Pages: |
704-16 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu J |
Year: |
2006 |
Journal: |
Biochemistry |
Title: |
Structural insight into the binding diversity between the human Nck2 SH3 domains and proline-rich proteins. |
Volume: |
45 |
Issue: |
23 |
Pages: |
7171-84 |
|
•
•
•
•
•
|
Publication |
First Author: |
Panzhinskiy E |
Year: |
2013 |
Journal: |
PLoS One |
Title: |
Protein tyrosine phosphatase 1B and insulin resistance: role of endoplasmic reticulum stress/reactive oxygen species/nuclear factor kappa B axis. |
Volume: |
8 |
Issue: |
10 |
Pages: |
e77228 |
|
•
•
•
•
•
|
Publication |
First Author: |
New LA |
Year: |
2016 |
Journal: |
J Am Soc Nephrol |
Title: |
Nephrin Tyrosine Phosphorylation Is Required to Stabilize and Restore Podocyte Foot Process Architecture. |
Volume: |
27 |
Issue: |
8 |
Pages: |
2422-35 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represent the first SH3 domain of Nck1. The first SH3 domain of Nck binds the PxxDY sequence in the CD3e cytoplasmic tail; this binding inhibits phosphorylation by Src kinases, resulting in the downregulation of TCR surface expression [].Nck1 (also called Nck-alpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling []. It binds and activates RasGAP, resulting in the downregulation of Ras []. It is also involved in the signaling of endothilin-mediated inhibition of cell migration [].Cytoplasmic proteins Nck are non-enzymatic adaptor proteins composed of three SH3 (Src homology 3) domains and a C-terminal SH2 domain []. They regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates []. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics []. They associate with tyrosine-phosphorylated growth factor receptors or their cellular substrates [, ]. There are two vertebrate Nck proteins, Nck1 and Nck2. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
380
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
380
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
142
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Ballif BA |
Year: |
2008 |
Journal: |
J Proteome Res |
Title: |
Large-scale identification and evolution indexing of tyrosine phosphorylation sites from murine brain. |
Volume: |
7 |
Issue: |
1 |
Pages: |
311-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kawai J |
Year: |
2001 |
Journal: |
Nature |
Title: |
Functional annotation of a full-length mouse cDNA collection. |
Volume: |
409 |
Issue: |
6821 |
Pages: |
685-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2000 |
Journal: |
Genome Res |
Title: |
Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. |
Volume: |
10 |
Issue: |
10 |
Pages: |
1617-30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
1999 |
Journal: |
Methods Enzymol |
Title: |
High-efficiency full-length cDNA cloning. |
Volume: |
303 |
|
Pages: |
19-44 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shibata K |
Year: |
2000 |
Journal: |
Genome Res |
Title: |
RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. |
Volume: |
10 |
Issue: |
11 |
Pages: |
1757-71 |
|
•
•
•
•
•
|
Publication |
First Author: |
Katayama S |
Year: |
2005 |
Journal: |
Science |
Title: |
Antisense transcription in the mammalian transcriptome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1564-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Huttlin EL |
Year: |
2010 |
Journal: |
Cell |
Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
Volume: |
143 |
Issue: |
7 |
Pages: |
1174-89 |
|
•
•
•
•
•
|
Publication |
First Author: |
Church DM |
Year: |
2009 |
Journal: |
PLoS Biol |
Title: |
Lineage-specific biology revealed by a finished genome assembly of the mouse. |
Volume: |
7 |
Issue: |
5 |
Pages: |
e1000112 |
|
•
•
•
•
•
|