Type |
Details |
Score |
Publication |
First Author: |
The Australian Phenomics Facility at The Australian National University |
Year: |
2006 |
Journal: |
MGI Direct Data Submission |
Title: |
Heritable mouse mutants from the ENU mutagenesis program at the Australian Phenomics Facility at The Australian National University |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bailey PJ |
Year: |
2006 |
Journal: |
Exp Cell Res |
Title: |
A global genomic transcriptional code associated with CNS-expressed genes. |
Volume: |
312 |
Issue: |
16 |
Pages: |
3108-19 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2003 |
|
Title: |
Data Curation Using Mouse Genome Assembly |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGI and IMPC |
Year: |
2018 |
Journal: |
Database Release |
Title: |
MGI Load of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Lennon G |
Year: |
1999 |
Journal: |
Database Download |
Title: |
WashU-HHMI Mouse EST Project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
UniProt-GOA |
Year: |
2012 |
|
Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Carninci P |
Year: |
2005 |
Journal: |
Science |
Title: |
The transcriptional landscape of the mammalian genome. |
Volume: |
309 |
Issue: |
5740 |
Pages: |
1559-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
GemPharmatech |
Year: |
2020 |
|
Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Cyagen Biosciences Inc. |
Year: |
2022 |
|
Title: |
Cyagen Biosciences Website. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
|
Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
GOA curators |
Year: |
2016 |
|
Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, western clawed |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
zebrafish |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
zebrafish |
|
•
•
•
•
•
|
Gene |
Type: |
gene |
Organism: |
frog, African clawed |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
Role of the hepatocyte nuclear factor-1beta (HNF-1beta) C-terminal domain in Pkhd1 (ARPKD) gene transcription and renal cystogenesis. |
|
•
•
•
•
•
|
Allele |
Name: |
transgene insertion 1, Peter Igarashi |
Allele Type: |
Transgenic |
Attribute String: |
Recombinase |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
194
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents a domain found in disease proteins PKHD1 and KIAA1199 and is named G8 after its 8 conserved glycines. It is predicted to contain 10 beta strands and an alpha helix []. |
|
•
•
•
•
•
|
Publication |
First Author: |
Kuo IY |
Year: |
2019 |
Journal: |
Sci Signal |
Title: |
Polycystin 2 regulates mitochondrial Ca2+ signaling, bioenergetics, and dynamics through mitofusin 2. |
Volume: |
12 |
Issue: |
580 |
|
|
•
•
•
•
•
|
Genotype |
Symbol: |
Pkd2/Pkd2 Tg(Pkhd1-cre)1Igr/? |
Background: |
Not Specified |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Pkd2/Pkd2 Tg(Pkhd1-cre)1Igr/? |
Background: |
involves: 129S4/SvJae * C57BL/6 |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Pkd2/Pkd2 Tg(Pkhd1-cre)1Igr/? |
Background: |
involves: C57BL/6 |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(Pkhd1-cre)1Igr/? |
Background: |
involves: C57BL/6 |
Zygosity: |
ot |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Pkd2/Pkd2 Tg(Pkhd1-cre)1Igr/? |
Background: |
Not Specified |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
He QY |
Year: |
2006 |
Journal: |
Bioinformatics |
Title: |
G8: a novel domain associated with polycystic kidney disease and non-syndromic hearing loss. |
Volume: |
22 |
Issue: |
18 |
Pages: |
2189-91 |
|
•
•
•
•
•
|
Publication |
First Author: |
Raman A |
Year: |
2017 |
Journal: |
J Am Soc Nephrol |
Title: |
Integrin-Linked Kinase Signaling Promotes Cyst Growth and Fibrosis in Polycystic Kidney Disease. |
Volume: |
28 |
Issue: |
9 |
Pages: |
2708-2719 |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mirc1/Mirc1 Pkd2/Pkd2 Tg(Pkhd1-cre)1Igr/? |
Background: |
involves: 129S4/SvJae * C57BL/6 |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mir214/Mir214 Pkd2/Pkd2 Tg(Pkhd1-cre)1Igr/? |
Background: |
Not Specified |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang Q |
Year: |
2018 |
Journal: |
Kidney Int |
Title: |
Adenylyl cyclase 5 deficiency reduces renal cyclic AMP and cyst growth in an orthologous mouse model of polycystic kidney disease. |
Volume: |
93 |
Issue: |
2 |
Pages: |
403-415 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhou X |
Year: |
2015 |
Journal: |
Hum Mol Genet |
Title: |
Therapeutic targeting of BET bromodomain protein, Brd4, delays cyst growth in ADPKD. |
Volume: |
24 |
Issue: |
14 |
Pages: |
3982-93 |
|
•
•
•
•
•
|
Publication |
First Author: |
Trott JF |
Year: |
2018 |
Journal: |
Am J Physiol Renal Physiol |
Title: |
Arginine reprogramming in ADPKD results in arginine-dependent cystogenesis. |
Volume: |
315 |
Issue: |
6 |
Pages: |
F1855-F1868 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li LX |
Year: |
2022 |
Journal: |
Cells |
Title: |
Single-Cell and CellChat Resolution Identifies Collecting Duct Cell Subsets and Their Communications with Adjacent Cells in PKD Kidneys. |
Volume: |
12 |
Issue: |
1 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Cao Y |
Year: |
2009 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Chemical modifier screen identifies HDAC inhibitors as suppressors of PKD models. |
Volume: |
106 |
Issue: |
51 |
Pages: |
21819-24 |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Pkd1/Pkd1 Tg(Pkhd1-cre)1Igr/? |
Background: |
involves: C57BL/6 * SJL |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Pkd2/Pkd2 Tg(Pkd1)248Som/? Tg(Pkhd1-cre)1Igr/? |
Background: |
involves: C57BL/6J * SJL/J |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Mir21a/Mir21a Pkd2/Pkd2 Tg(Pkhd1-cre)1Igr/? |
Background: |
involves: 129S/SvEv |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Grosch M |
Year: |
2021 |
Journal: |
J Cell Sci |
Title: |
A polycystin-2 protein with modified channel properties leads to an increased diameter of renal tubules and to renal cysts. |
Volume: |
134 |
Issue: |
16 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Aboudehen K |
Year: |
2017 |
Journal: |
J Am Soc Nephrol |
Title: |
Hepatocyte Nuclear Factor-1β Regulates Urinary Concentration and Response to Hypertonicity. |
Volume: |
28 |
Issue: |
10 |
Pages: |
2887-2900 |
|
•
•
•
•
•
|
Publication |
First Author: |
Aboudehen K |
Year: |
2018 |
Journal: |
J Biol Chem |
Title: |
Long noncoding RNA Hoxb3os is dysregulated in autosomal dominant polycystic kidney disease and regulates mTOR signaling. |
Volume: |
293 |
Issue: |
24 |
Pages: |
9388-9398 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ye H |
Year: |
2017 |
Journal: |
Am J Physiol Renal Physiol |
Title: |
The regulatory 1α subunit of protein kinase A modulates renal cystogenesis. |
Volume: |
313 |
Issue: |
3 |
Pages: |
F677-F686 |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Hoxb3os/Hoxb3os Pkd1/Pkd1 Tg(Pkhd1-cre)1Igr/? |
Background: |
involves: 129S4/SvJae * C57BL/6J |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Besse W |
Year: |
2017 |
Journal: |
J Clin Invest |
Title: |
Isolated polycystic liver disease genes define effectors of polycystin-1 function. |
Volume: |
127 |
Issue: |
5 |
Pages: |
1772-1785 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hogan MC |
Year: |
2003 |
Journal: |
Hum Mol Genet |
Title: |
PKHDL1, a homolog of the autosomal recessive polycystic kidney disease gene, encodes a receptor with inducible T lymphocyte expression. |
Volume: |
12 |
Issue: |
6 |
Pages: |
685-98 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gresh L |
Year: |
2004 |
Journal: |
EMBO J |
Title: |
A transcriptional network in polycystic kidney disease. |
Volume: |
23 |
Issue: |
7 |
Pages: |
1657-68 |
|
•
•
•
•
•
|
Publication |
First Author: |
Belyea BC |
Year: |
2023 |
Journal: |
Clin Sci (Lond) |
Title: |
Overexpression of notch signaling in renin cells leads to a polycystic kidney phenotype. |
Volume: |
137 |
Issue: |
1 |
Pages: |
35-45 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lakhia R |
Year: |
2020 |
Journal: |
JCI Insight |
Title: |
Interstitial microRNA miR-214 attenuates inflammation and polycystic kidney disease progression. |
Volume: |
5 |
Issue: |
7 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Ferrè S |
Year: |
2019 |
Journal: |
Kidney Int |
Title: |
Renal tubular cell spliced X-box binding protein 1 (Xbp1s) has a unique role in sepsis-induced acute kidney injury and inflammation. |
Volume: |
96 |
Issue: |
6 |
Pages: |
1359-1373 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen L |
Year: |
2015 |
Journal: |
J Clin Invest |
Title: |
Macrophage migration inhibitory factor promotes cyst growth in polycystic kidney disease. |
Volume: |
125 |
Issue: |
6 |
Pages: |
2399-412 |
|
•
•
•
•
•
|
Publication |
First Author: |
Flowers EM |
Year: |
2018 |
Journal: |
Nat Commun |
Title: |
Lkb1 deficiency confers glutamine dependency in polycystic kidney disease. |
Volume: |
9 |
Issue: |
1 |
Pages: |
814 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cai Y |
Year: |
2014 |
Journal: |
J Clin Invest |
Title: |
Altered trafficking and stability of polycystins underlie polycystic kidney disease. |
Volume: |
124 |
Issue: |
12 |
Pages: |
5129-44 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ishikawa Y |
Year: |
2019 |
Journal: |
J Am Soc Nephrol |
Title: |
Spliced XBP1 Rescues Renal Interstitial Inflammation Due to Loss of Sec63 in Collecting Ducts. |
|
|
|
|
•
•
•
•
•
|
Genotype |
Symbol: |
Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Kif3a/Kif3a<+> Tg(Pkhd1-cre)1Igr/? |
Background: |
involves: 129S1/Sv * 129S4/SvJaeSor * 129X1/SvJ |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1383
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1361
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1361
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Hajarnis S |
Year: |
2017 |
Journal: |
Nat Commun |
Title: |
microRNA-17 family promotes polycystic kidney disease progression through modulation of mitochondrial metabolism. |
Volume: |
8 |
|
Pages: |
14395 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang C |
Year: |
2021 |
Journal: |
J Am Soc Nephrol |
Title: |
Cyclin-Dependent Kinase 1 Activity Is a Driver of Cyst Growth in Polycystic Kidney Disease. |
Volume: |
32 |
Issue: |
1 |
Pages: |
41-51 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hajarnis S |
Year: |
2018 |
Journal: |
J Am Soc Nephrol |
Title: |
Suppression of microRNA Activity in Kidney Collecting Ducts Induces Partial Loss of Epithelial Phenotype and Renal Fibrosis. |
Volume: |
29 |
Issue: |
2 |
Pages: |
518-531 |
|
•
•
•
•
•
|
Publication |
First Author: |
Weisser I |
Year: |
2024 |
Journal: |
J Am Soc Nephrol |
Title: |
Ablation of Long Noncoding RNA Hoxb3os Exacerbates Cystogenesis in Mouse Polycystic Kidney Disease. |
Volume: |
35 |
Issue: |
1 |
Pages: |
41-55 |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Kif3a/Kif3a Tg(Pkhd1-cre)1Igr/? |
Background: |
involves: 129S1/Sv * 129S4/SvJaeSor * 129X1/SvJ |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Lakhia R |
Year: |
2016 |
Journal: |
J Am Soc Nephrol |
Title: |
MicroRNA-21 Aggravates Cyst Growth in a Model of Polycystic Kidney Disease. |
Volume: |
27 |
Issue: |
8 |
Pages: |
2319-30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shibazaki S |
Year: |
2008 |
Journal: |
Hum Mol Genet |
Title: |
Cyst formation and activation of the extracellular regulated kinase pathway after kidney specific inactivation of Pkd1. |
Volume: |
17 |
Issue: |
11 |
Pages: |
1505-16 |
|
•
•
•
•
•
|
Publication |
First Author: |
Patel V |
Year: |
2008 |
Journal: |
Hum Mol Genet |
Title: |
Acute kidney injury and aberrant planar cell polarity induce cyst formation in mice lacking renal cilia. |
Volume: |
17 |
Issue: |
11 |
Pages: |
1578-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li Y |
Year: |
2023 |
Journal: |
Elife |
Title: |
Inactivation of Invs/Nphp2 in renal epithelial cells drives infantile nephronophthisis like phenotypes in mouse. |
Volume: |
12 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Ma M |
Year: |
2013 |
Journal: |
Nat Genet |
Title: |
Loss of cilia suppresses cyst growth in genetic models of autosomal dominant polycystic kidney disease. |
Volume: |
45 |
Issue: |
9 |
Pages: |
1004-12 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
4249
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
4247
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
4249
 |
Fragment?: |
false |
|
•
•
•
•
•
|