Type |
Details |
Score |
Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Ontology Consortium |
Year: |
2010 |
|
Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
|
Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
MGI Genome Annotation Group and UniGene Staff |
Year: |
2015 |
Journal: |
Database Download |
Title: |
MGI-UniGene Interconnection Effort |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
|
Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
Author |
|
•
•
•
•
•
|
Author |
|
•
•
•
•
•
|
Author |
|
•
•
•
•
•
|
Author |
|
•
•
•
•
•
|
Author |
|
•
•
•
•
•
|
Author |
|
•
•
•
•
•
|
Author |
|
•
•
•
•
•
|
Publication |
First Author: |
Guo C |
Year: |
2005 |
Journal: |
DNA Repair (Amst) |
Title: |
Multiple PolK (POLK) transcripts in mammalian testis. |
Volume: |
4 |
Issue: |
3 |
Pages: |
397-402 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
573
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Pathway |
|
•
•
•
•
•
|
Publication |
First Author: |
Yan F |
Year: |
1999 |
Journal: |
J Biol Chem |
Title: |
Aminosalicylic acid inhibits IkappaB kinase alpha phosphorylation of IkappaBalpha in mouse intestinal epithelial cells. |
Volume: |
274 |
Issue: |
51 |
Pages: |
36631-6 |
|
•
•
•
•
•
|
Author |
|
•
•
•
•
•
|
Publication |
First Author: |
Svensson EC |
Year: |
1999 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Molecular cloning of FOG-2: a modulator of transcription factor GATA-4 in cardiomyocytes. |
Volume: |
96 |
Issue: |
3 |
Pages: |
956-61 |
|
•
•
•
•
•
|
Publication |
First Author: |
Svensson EC |
Year: |
2000 |
Journal: |
J Biol Chem |
Title: |
A functionally conserved N-terminal domain of the friend of GATA-2 (FOG-2) protein represses GATA4-dependent transcription. |
Volume: |
275 |
Issue: |
27 |
Pages: |
20762-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dise RS |
Year: |
2008 |
Journal: |
Am J Physiol Gastrointest Liver Physiol |
Title: |
Epidermal growth factor stimulates Rac activation through Src and phosphatidylinositol 3-kinase to promote colonic epithelial cell migration. |
Volume: |
294 |
Issue: |
1 |
Pages: |
G276-85 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu CY |
Year: |
2015 |
Journal: |
Am J Physiol Gastrointest Liver Physiol |
Title: |
Optical reconstruction of murine colorectal mucosa at cellular resolution. |
Volume: |
308 |
Issue: |
9 |
Pages: |
G721-35 |
|
•
•
•
•
•
|
Publication |
First Author: |
Batts LE |
Year: |
2006 |
Journal: |
Dev Dyn |
Title: |
Bmp signaling is required for intestinal growth and morphogenesis. |
Volume: |
235 |
Issue: |
6 |
Pages: |
1563-70 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang Y |
Year: |
2012 |
Journal: |
Lab Invest |
Title: |
ErbB2 and ErbB3 regulate recovery from dextran sulfate sodium-induced colitis by promoting mouse colon epithelial cell survival. |
Volume: |
92 |
Issue: |
3 |
Pages: |
437-50 |
|
•
•
•
•
•
|
Publication |
First Author: |
Frey MR |
Year: |
2010 |
Journal: |
Lab Invest |
Title: |
ErbB4 promotes cyclooxygenase-2 expression and cell survival in colon epithelial cells. |
Volume: |
90 |
Issue: |
10 |
Pages: |
1415-24 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dubé PE |
Year: |
2018 |
Journal: |
Sci Rep |
Title: |
Pharmacological activation of epidermal growth factor receptor signaling inhibits colitis-associated cancer in mice. |
Volume: |
8 |
Issue: |
1 |
Pages: |
9119 |
|
•
•
•
•
•
|
Publication |
First Author: |
Frey MR |
Year: |
2006 |
Journal: |
EMBO J |
Title: |
p38 kinase regulates epidermal growth factor receptor downregulation and cellular migration. |
Volume: |
25 |
Issue: |
24 |
Pages: |
5683-92 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dubé PE |
Year: |
2012 |
Journal: |
J Clin Invest |
Title: |
Epidermal growth factor receptor inhibits colitis-associated cancer in mice. |
Volume: |
122 |
Issue: |
8 |
Pages: |
2780-92 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yamaoka T |
Year: |
2008 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Transactivation of EGF receptor and ErbB2 protects intestinal epithelial cells from TNF-induced apoptosis. |
Volume: |
105 |
Issue: |
33 |
Pages: |
11772-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sharifkhodaei Z |
Year: |
2023 |
Journal: |
iScience |
Title: |
Colitis-induced upregulation of tumor necrosis factor receptor-2 (TNFR2) terminates epithelial regenerative signaling to restore homeostasis. |
Volume: |
26 |
Issue: |
10 |
Pages: |
107829 |
|
•
•
•
•
•
|
Publication |
First Author: |
Punit S |
Year: |
2015 |
Journal: |
Gastroenterology |
Title: |
Tumor Necrosis Factor Receptor 2 Restricts the Pathogenicity of CD8(+) T Cells in Mice With Colitis. |
Volume: |
149 |
Issue: |
4 |
Pages: |
993-1005.e2 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li B |
Year: |
2009 |
Journal: |
Cancer Res |
Title: |
Low levels of tumor necrosis factor alpha increase tumor growth by inducing an endothelial phenotype of monocytes recruited to the tumor site. |
Volume: |
69 |
Issue: |
1 |
Pages: |
338-48 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yan F |
Year: |
2004 |
Journal: |
J Clin Invest |
Title: |
Kinase suppressor of Ras-1 protects intestinal epithelium from cytokine-mediated apoptosis during inflammation. |
Volume: |
114 |
Issue: |
9 |
Pages: |
1272-80 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu CY |
Year: |
2023 |
Journal: |
Dev Cell |
Title: |
Wound-healing plasticity enables clonal expansion of founder progenitor cells in colitis. |
Volume: |
58 |
Issue: |
21 |
Pages: |
2309-2325.e7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Edelblum KL |
Year: |
2008 |
Journal: |
J Biol Chem |
Title: |
TNFR1 promotes tumor necrosis factor-mediated mouse colon epithelial cell survival through RAF activation of NF-kappaB. |
Volume: |
283 |
Issue: |
43 |
Pages: |
29485-94 |
|
•
•
•
•
•
|
Publication |
First Author: |
McElroy SJ |
Year: |
2011 |
Journal: |
Am J Physiol Gastrointest Liver Physiol |
Title: |
Tumor necrosis factor receptor 1-dependent depletion of mucus in immature small intestine: a potential role in neonatal necrotizing enterocolitis. |
Volume: |
301 |
Issue: |
4 |
Pages: |
G656-66 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhao G |
Year: |
2016 |
Journal: |
J Biol Chem |
Title: |
Activation of Epidermal Growth Factor Receptor in Macrophages Mediates Feedback Inhibition of M2 Polarization and Gastrointestinal Tumor Cell Growth. |
Volume: |
291 |
Issue: |
39 |
Pages: |
20462-72 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fontes JD |
Year: |
2015 |
Journal: |
PLoS One |
Title: |
Death of Neurons following Injury Requires Conductive Neuronal Gap Junction Channels but Not a Specific Connexin. |
Volume: |
10 |
Issue: |
5 |
Pages: |
e0125395 |
|
•
•
•
•
•
|
Publication |
First Author: |
Edelblum KL |
Year: |
2008 |
Journal: |
Gastroenterology |
Title: |
Raf protects against colitis by promoting mouse colon epithelial cell survival through NF-kappaB. |
Volume: |
135 |
Issue: |
2 |
Pages: |
539-51 |
|
•
•
•
•
•
|
Publication |
First Author: |
Goettel JA |
Year: |
2011 |
Journal: |
Exp Cell Res |
Title: |
KSR1 is a functional protein kinase capable of serine autophosphorylation and direct phosphorylation of MEK1. |
Volume: |
317 |
Issue: |
4 |
Pages: |
452-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
McElroy SJ |
Year: |
2008 |
Journal: |
Am J Physiol Gastrointest Liver Physiol |
Title: |
Tumor necrosis factor inhibits ligand-stimulated EGF receptor activation through a TNF receptor 1-dependent mechanism. |
Volume: |
295 |
Issue: |
2 |
Pages: |
G285-93 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sierra JC |
Year: |
2013 |
Journal: |
Am J Physiol Gastrointest Liver Physiol |
Title: |
Induction of COX-2 expression by Helicobacter pylori is mediated by activation of epidermal growth factor receptor in gastric epithelial cells. |
Volume: |
305 |
Issue: |
2 |
Pages: |
G196-203 |
|
•
•
•
•
•
|
Publication |
First Author: |
Roseman CC |
Year: |
2020 |
Journal: |
J Exp Zool B Mol Dev Evol |
Title: |
Variation in mouse pelvic morphology maps to locations enriched in Sox9 Class II and Pitx1 regulatory features. |
Volume: |
334 |
Issue: |
2 |
Pages: |
100-112 |
|
•
•
•
•
•
|
Publication |
First Author: |
Schumacher MA |
Year: |
2021 |
Journal: |
Am J Physiol Gastrointest Liver Physiol |
Title: |
NRG4-ErbB4 signaling represses proinflammatory macrophage activity. |
Volume: |
320 |
Issue: |
6 |
Pages: |
G990-G1001 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wang L |
Year: |
2013 |
Journal: |
PLoS One |
Title: |
Berberine inhibits proliferation and down-regulates epidermal growth factor receptor through activation of Cbl in colon tumor cells. |
Volume: |
8 |
Issue: |
2 |
Pages: |
e56666 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu CY |
Year: |
2020 |
Journal: |
Cell Rep |
Title: |
TNF Receptor 1 Promotes Early-Life Immunity and Protects against Colitis in Mice. |
Volume: |
33 |
Issue: |
3 |
Pages: |
108275 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yan F |
Year: |
2009 |
Journal: |
Gastroenterology |
Title: |
Epidermal growth factor receptor activation protects gastric epithelial cells from Helicobacter pylori-induced apoptosis. |
Volume: |
136 |
Issue: |
4 |
Pages: |
1297-1307, e1-3 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen X |
Year: |
2007 |
Journal: |
Mol Cell Biol |
Title: |
Integrin alpha1beta1 controls reactive oxygen species synthesis by negatively regulating epidermal growth factor receptor-mediated Rac activation. |
Volume: |
27 |
Issue: |
9 |
Pages: |
3313-26 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lu N |
Year: |
2014 |
Journal: |
J Immunol |
Title: |
Activation of the epidermal growth factor receptor in macrophages regulates cytokine production and experimental colitis. |
Volume: |
192 |
Issue: |
3 |
Pages: |
1013-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Billeter AT |
Year: |
2014 |
Journal: |
FASEB J |
Title: |
MicroRNA-155 potentiates the inflammatory response in hypothermia by suppressing IL-10 production. |
Volume: |
28 |
Issue: |
12 |
Pages: |
5322-36 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ahmad R |
Year: |
2014 |
Journal: |
Mucosal Immunol |
Title: |
Targeted colonic claudin-2 expression renders resistance to epithelial injury, induces immune suppression, and protects from colitis. |
Volume: |
7 |
Issue: |
6 |
Pages: |
1340-53 |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
211
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
3122
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1249
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Sharma J |
Year: |
2021 |
Journal: |
Sci Rep |
Title: |
Suppressor of cytokine signaling-1 mimetic peptides attenuate lymphocyte activation in the MRL/lpr mouse autoimmune model. |
Volume: |
11 |
Issue: |
1 |
Pages: |
6354 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gao X |
Year: |
2022 |
Journal: |
Cancer Res |
Title: |
Notch Signaling Promotes Mature T-Cell Lymphomagenesis. |
Volume: |
82 |
Issue: |
20 |
Pages: |
3763-3773 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chaturvedi R |
Year: |
2014 |
Journal: |
Gastroenterology |
Title: |
Activation of EGFR and ERBB2 by Helicobacter pylori results in survival of gastric epithelial cells with DNA damage. |
Volume: |
146 |
Issue: |
7 |
Pages: |
1739-51.e14 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
852
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
339
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
349
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
356
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1131
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
364
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
261
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
121
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
270
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
623
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
128
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
734
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
156
 |
Fragment?: |
false |
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•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
305
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
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•
•
•
•
|