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Search results 201 to 292 out of 292 for Rif1

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Type Details Score
GXD Expression
GXD Expression
Probe: MGI:3618517
Assay Type: Immunohistochemistry
Annotation Date: 2006-04-05
Strength: Present
Sex: Female
Emaps: EMAPS:3077928
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3618529
Age: postnatal adult
Image: 6G
Note: Expression is in the nuclei of fully grown oocytes in antral follicles.
Specimen Label: 6G
Detected: true
Specimen Num: 36
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GXD Expression
GXD Expression
 
Probe: MGI:3618517
Assay Type: Immunohistochemistry
Annotation Date: 2006-04-05
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:1605711
Pattern: Not Specified
Stage: TS11
Assay Id: MGI:3618529
Age: embryonic day 7.5
Image: 4 7.5 dpc
Specimen Label: 4 7.5 dpc
Detected: true
Specimen Num: 13
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GXD Expression
GXD Expression
   
Probe: MGI:4845920
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Absent
Sex: Female
Emaps: EMAPS:2892420
Stage: TS20
Assay Id: MGI:5540731
Age: embryonic day 12.5
Image: GUDMAP:8300
Specimen Label: GUDMAP:8300
Detected: false
Specimen Num: 4
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GXD Expression
GXD Expression
Probe: MGI:3618517
Assay Type: Immunohistochemistry
Annotation Date: 2006-04-05
Strength: Present
Sex: Not Specified
Emaps: EMAPS:160362
Pattern: Not Specified
Stage: TS02
Assay Id: MGI:3618529
Age: embryonic day 1.0
Image: 3E
Note: Expression is nuclear.
Specimen Label: 3E
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
   
Probe: MGI:3618517
Assay Type: Immunohistochemistry
Annotation Date: 2006-04-05
Strength: Absent
Sex: Not Specified
Emaps: EMAPS:160516
Stage: TS06
Assay Id: MGI:3618529
Age: embryonic day 4.5
Image: 3J
Specimen Label: 3J
Detected: false
Specimen Num: 10
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GXD Expression
GXD Expression
Probe: MGI:4845920
Assay Type: RNA in situ
Annotation Date: 2014-02-07
Strength: Present
Sex: Female
Emaps: EMAPS:1796220
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:5540731
Age: embryonic day 12.5
Image: GUDMAP:8300
Note: speckled signal pattern is indicative of mesenchymal stroma
Specimen Label: GUDMAP:8300
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
 
Probe: MGI:3618517
Assay Type: Immunohistochemistry
Annotation Date: 2006-04-05
Strength: Weak
Sex: Female
Emaps: EMAPS:3562728
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:3618529
Age: postnatal adult
Image: 6C
Specimen Label: 6C
Detected: true
Specimen Num: 32
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Publication
27820601 | J:240463
First Author: Hansen RK
Year: 2016
Journal: Nat Cell Biol
Title: SCAI promotes DNA double-strand break repair in distinct chromosomal contexts.
Volume: 18
Issue: 12
Pages: 1357-1366
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Publication
16518401 | J:107560
First Author: Loh YH
Year: 2006
Journal: Nat Genet
Title: The Oct4 and Nanog transcription network regulates pluripotency in mouse embryonic stem cells.
Volume: 38
Issue: 4
Pages: 431-40
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Publication
29311308 | J:260725
First Author: Panchakshari RA
Year: 2018
Journal: Proc Natl Acad Sci U S A
Title: DNA double-strand break response factors influence end-joining features of IgH class switch and general translocation junctions.
Volume: 115
Issue: 4
Pages: 762-767
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Publication
30293785 | J:269122
First Author: Delgado-Benito V
Year: 2018
Journal: Mol Cell
Title: The Chromatin Reader ZMYND8 Regulates Igh Enhancers to Promote Immunoglobulin Class Switch Recombination.
Volume: 72
Issue: 4
Pages: 636-649.e8
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Publication
26308889 | J:262446
First Author: Dong J
Year: 2015
Journal: Nature
Title: Orientation-specific joining of AID-initiated DNA breaks promotes antibody class switching.
Volume: 525
Issue: 7567
Pages: 134-139
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Publication
17093407 | J:154829
First Author: Wang J
Year: 2006
Journal: Nature
Title: A protein interaction network for pluripotency of embryonic stem cells.
Volume: 444
Issue: 7117
Pages: 364-8
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Publication
27320916 | J:238371
First Author: Rocha PP
Year: 2016
Journal: Cell Rep
Title: A Damage-Independent Role for 53BP1 that Impacts Break Order and Igh Architecture during Class Switch Recombination.
Volume: 16
Issue: 1
Pages: 48-55
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Publication
20362541 | J:184123
First Author: van den Berg DL
Year: 2010
Journal: Cell Stem Cell
Title: An Oct4-centered protein interaction network in embryonic stem cells.
Volume: 6
Issue: 4
Pages: 369-81
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Publication
24025402 | J:201508
First Author: Daxinger L
Year: 2013
Journal: Genome Biol
Title: An ENU mutagenesis screen identifies novel and known genes involved in epigenetic processes in the mouse.
Volume: 14
Issue: 9
Pages: R96
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Publication
16934000 | J:115983
First Author: Ghazalpour A
Year: 2006
Journal: PLoS Genet
Title: Integrating genetic and network analysis to characterize genes related to mouse weight.
Volume: 2
Issue: 8
Pages: e130
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Publication
20439489 | J:163558
First Author: Tarantino C
Year: 2010
Journal: FASEB J
Title: miRNA 34a, 100, and 137 modulate differentiation of mouse embryonic stem cells.
Volume: 24
Issue: 9
Pages: 3255-63
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Publication
16107646 | J:100324
First Author: Bulfone A
Year: 2005
Journal: J Neurosci
Title: Telencephalic embryonic subtractive sequences: a unique collection of neurodevelopmental genes.
Volume: 25
Issue: 33
Pages: 7586-600
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Publication
19334288 | J:148410
First Author: Combes AN
Year: 2009
Journal: Dev Dyn
Title: Three-dimensional visualization of testis cord morphogenesis, a novel tubulogenic mechanism in development.
Volume: 238
Issue: 5
Pages: 1033-41
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Publication
- | J:238766
     
First Author: Shanghai Model Organisms Center
Year: 2017
Journal: MGI Direct Data Submission
Title: Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China
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Publication
15741177 | J:126097
First Author: Cobellis G
Year: 2005
Journal: Nucleic Acids Res
Title: Tagging genes with cassette-exchange sites.
Volume: 33
Issue: 4
Pages: e44
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Publication
10512203 | J:93290
First Author: Araki K
Year: 1999
Journal: Cell Mol Biol (Noisy-le-grand)
Title: Exchangeable gene trap using the Cre/mutated lox system.
Volume: 45
Issue: 5
Pages: 737-50
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Publication
15840001 | J:110088
First Author: Taniwaki T
Year: 2005
Journal: Dev Growth Differ
Title: Characterization of an exchangeable gene trap using pU-17 carrying a stop codon-beta geo cassette.
Volume: 47
Issue: 3
Pages: 163-72
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Publication
21731673 | J:174767
First Author: Tang F
Year: 2011
Journal: PLoS One
Title: Deterministic and stochastic allele specific gene expression in single mouse blastomeres.
Volume: 6
Issue: 6
Pages: e21208
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Publication
- | J:24194
     
First Author: The Jackson Laboratory Backcross DNA Panel Mapping Resource
Year: 1999
Journal: Database Release
Title: JAX BSS Panel Mapping Data
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Publication
20412781 | J:140465
First Author: Guo G
Year: 2010
Journal: Dev Cell
Title: Resolution of cell fate decisions revealed by single-cell gene expression analysis from zygote to blastocyst.
Volume: 18
Issue: 4
Pages: 675-85
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Publication
10725249 | J:60984
First Author: Ko MS
Year: 2000
Journal: Development
Title: Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development.
Volume: 127
Issue: 8
Pages: 1737-49
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Publication
12904583 | J:85162
First Author: Hansen J
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome.
Volume: 100
Issue: 17
Pages: 9918-22
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Publication
17967808 | J:152068
First Author: Friedel RH
Year: 2007
Journal: Brief Funct Genomic Proteomic
Title: EUCOMM--the European conditional mouse mutagenesis program.
Volume: 6
Issue: 3
Pages: 180-5
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Publication
- | J:80155
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations for FANTOM2 data
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Publication
- | J:57656
     
First Author: Lennon G
Year: 1999
Journal: Database Download
Title: WashU-HHMI Mouse EST Project
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Publication
- | J:155845
     
First Author: Wellcome Trust Sanger Institute
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Wellcome Trust Sanger Institute
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Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
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Publication
18799693 | J:142754
First Author: Hansen GM
Year: 2008
Journal: Genome Res
Title: Large-scale gene trapping in C57BL/6N mouse embryonic stem cells.
Volume: 18
Issue: 10
Pages: 1670-9
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Publication
16602821 | J:162220
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
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Publication
- | J:85000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2003
Title: MGI Sequence Curation Reference
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Publication
11217851 | J:65060
First Author: Kawai J
Year: 2001
Journal: Nature
Title: Functional annotation of a full-length mouse cDNA collection.
Volume: 409
Issue: 6821
Pages: 685-90
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Publication
14610273 | J:86696
First Author: Zambrowicz BP
Year: 2003
Journal: Proc Natl Acad Sci U S A
Title: Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention.
Volume: 100
Issue: 24
Pages: 14109-14
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
21677750 | J:173534
First Author: Skarnes WC
Year: 2011
Journal: Nature
Title: A conditional knockout resource for the genome-wide study of mouse gene function.
Volume: 474
Issue: 7351
Pages: 337-42
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Publication
- | J:141210
     
First Author: Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI)
Year: 2008
Journal: Database Download
Title: Mouse Gene Trap Data Load from dbGSS
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:60000
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:68900
     
First Author: The Jackson Laboratory Mouse Radiation Hybrid Database
Year: 2004
Journal: Database Release
Title: Mouse T31 Radiation Hybrid Data Load
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
- | J:75000
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2002
Title: Mouse Genome Informatics Computational Sequence to Gene Associations
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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UniProt Feature
UniProt Feature
Begin: 1
Description: Telomere-associated protein RIF1
Type: chain
End: 2419
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Publication
35216668 | J:351880
First Author: Setiaputra D
Year: 2022
Journal: Mol Cell
Title: RIF1 acts in DNA repair through phosphopeptide recognition of 53BP1.
Volume: 82
Issue: 7
Pages: 1359-1371.e9
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Protein
Q6PR54-3
Organism: Mus musculus/domesticus
Length: 2426  
Fragment?: false
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Protein
Q6PR54-2
Organism: Mus musculus/domesticus
Length: 2393  
Fragment?: false
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Protein
A0A2I3BQB0
Organism: Mus musculus/domesticus
Length: 44  
Fragment?: false
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Protein Coding Gene
MGI:1351595 | Insl6
Type: protein_coding_gene
Organism: mouse, laboratory
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Allele
Rif1<tm3.1Sbcd> | MGI:5439959
Name: replication timing regulatory factor 1; targeted mutation 3.1, Sara B C Buonomo
Allele Type: Targeted
Attribute String: Reporter
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Allele
Rif1<em1Smoc> | MGI:7292056
Name: replication timing regulatory factor 1; endonuclease-mediated mutation 1, Shanghai Model Organisms Center
Allele Type: Endonuclease-mediated
Attribute String: Conditional ready, No functional change
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Allele
Tg(Rif1-EGFP)KC17Gsat | MGI:4847383
Name: transgene insertion KC17, GENSAT Project at Rockefeller University
Allele Type: Transgenic
Attribute String: Reporter
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Genotype
Genotype
Symbol: Rif1/Rif1
Background: involves: C57BL/6 * C57BL/6J
Zygosity: hm
Has Mutant Allele: true
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Publication
9087429 | -
First Author: Wotton D
Year: 1997
Journal: Genes Dev
Title: A novel Rap1p-interacting factor, Rif2p, cooperates with Rif1p to regulate telomere length in Saccharomyces cerevisiae.
Volume: 11
Issue: 6
Pages: 748-60
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Protein Domain
IPR022031 | Rif1_N
Type: Domain
Description: This domain is found in N-terminal of the telomere-associated protein,Rif1. In budding yeast, Rif1 is Recruited to telomeres by interaction with the C terminus of RAP1 is recruited to telomeres by interaction with the C terminus of RAP1 and negatively regulates telomere length by preventing telomere elongation or promoting degradation of the telomere ends [, ]. In mammals, Rif1 is required for checkpoint mediated arrest of cell cycle progression in response to DNA damage during S-phase (the intra-S-phase checkpoint) [].
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Strain
MGI:5004011 | STOCK Tg(Rif1-EGFP)KC17Gsat/Mmucd
Attribute String: mutant stock, transgenic
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Publication
37781512 | J:357753
First Author: Lei WL
Year: 2023
Journal: Int J Biol Sci
Title: SRSF1-mediated alternative splicing is required for spermatogenesis.
Volume: 19
Issue: 15
Pages: 4883-4897
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Publication
31653568 | J:286257
First Author: Callen E
Year: 2020
Journal: Mol Cell
Title: 53BP1 Enforces Distinct Pre- and Post-resection Blocks on Homologous Recombination.
Volume: 77
Issue: 1
Pages: 26-38.e7
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Publication
35439434 | J:337726
First Author: Bayley R
Year: 2022
Journal: Mol Cell
Title: H3K4 methylation by SETD1A/BOD1L facilitates RIF1-dependent NHEJ.
Volume: 82
Issue: 10
Pages: 1924-1939.e10
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Publication
31390554 | J:288491
First Author: Sundaravinayagam D
Year: 2019
Journal: Cell Rep
Title: 53BP1 Supports Immunoglobulin Class Switch Recombination Independently of Its DNA Double-Strand Break End Protection Function.
Volume: 28
Issue: 6
Pages: 1389-1399.e6
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Publication
37633048 | J:341349
 
First Author: Ni W
Year: 2023
Journal: Redox Biol
Title: An inducible long noncoding RNA, LncZFHX2, facilitates DNA repair to mediate osteoarthritis pathology.
Volume: 66
Pages: 102858
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Publication
28604711 | J:250571
 
First Author: Ha K
Year: 2017
Journal: Nat Commun
Title: The anaphase promoting complex impacts repair choice by protecting ubiquitin signalling at DNA damage sites.
Volume: 8
Pages: 15751
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Publication
34354233 | J:325306
First Author: Zhao F
Year: 2021
Journal: Nat Cell Biol
Title: ASTE1 promotes shieldin-complex-mediated DNA repair by attenuating end resection.
Volume: 23
Issue: 8
Pages: 894-904
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Publication
28240985 | J:244866
   
First Author: Luijsterburg MS
Year: 2017
Journal: Elife
Title: A PALB2-interacting domain in RNF168 couples homologous recombination to DNA break-induced chromatin ubiquitylation.
Volume: 6
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Publication
31302002 | J:279873
First Author: Colomer C
Year: 2019
Journal: Mol Cell
Title: IKKα Kinase Regulates the DNA Damage Response and Drives Chemo-resistance in Cancer.
Volume: 75
Issue: 4
Pages: 669-682.e5
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Publication
26786103 | J:231228
First Author: Tanaka H
Year: 2016
Journal: J Biol Chem
Title: Epigenetic Regulation of the Blimp-1 Gene (Prdm1) in B Cells Involves Bach2 and Histone Deacetylase 3.
Volume: 291
Issue: 12
Pages: 6316-30
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Publication
25799990 | J:222163
First Author: Boersma V
Year: 2015
Journal: Nature
Title: MAD2L2 controls DNA repair at telomeres and DNA breaks by inhibiting 5' end resection.
Volume: 521
Issue: 7553
Pages: 537-540
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Publication
31619063 | J:307019
First Author: Li Z
Year: 2020
Journal: Arterioscler Thromb Vasc Biol
Title: Short AIP1 (ASK1-Interacting Protein-1) Isoform Localizes to the Mitochondria and Promotes Vascular Dysfunction.
Volume: 40
Issue: 1
Pages: 112-127
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Publication
10598589 | J:58920
First Author: Hsu SY
Year: 1999
Journal: Mol Endocrinol
Title: Cloning of two novel mammalian paralogs of relaxin/insulin family proteins and their expression in testis and kidney.
Volume: 13
Issue: 12
Pages: 2163-74
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Publication
- | J:100256
     
First Author: The Gene Expression Nervous System Atlas (GENSAT) Project, The Rockefeller University (New York, NY)
Year: 2005
Journal: Database Download
Title: MGI download of GENSAT transgene data
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
15489334 | -
First Author: Gerhard DS
Year: 2004
Journal: Genome Res
Title: The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC).
Volume: 14
Issue: 10B
Pages: 2121-7
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Publication
21183079 | J:292518
First Author: Huttlin EL
Year: 2010
Journal: Cell
Title: A tissue-specific atlas of mouse protein phosphorylation and expression.
Volume: 143
Issue: 7
Pages: 1174-89
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Publication
19468303 | -
First Author: Church DM
Year: 2009
Journal: PLoS Biol
Title: Lineage-specific biology revealed by a finished genome assembly of the mouse.
Volume: 7
Issue: 5
Pages: e1000112
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