| Type |
Details |
Score |
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1690823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_11 |
|
| Specimen Label: |
euxassay_012159_11 |
| Detected: |
true |
| Specimen Num: |
10 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1690823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_12 |
|
| Specimen Label: |
euxassay_012159_12 |
| Detected: |
true |
| Specimen Num: |
11 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1690823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_13 |
|
| Specimen Label: |
euxassay_012159_13 |
| Detected: |
true |
| Specimen Num: |
12 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1690823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_14 |
|
| Specimen Label: |
euxassay_012159_14 |
| Detected: |
true |
| Specimen Num: |
13 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1690823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_15 |
|
| Specimen Label: |
euxassay_012159_15 |
| Detected: |
true |
| Specimen Num: |
14 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:2680191 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2003-12-01 |
| Strength: |
Weak |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1609219 |
| Pattern: |
Not Specified |
| Stage: |
TS19 |
| Assay Id: |
MGI:2680224 |
| Age: |
embryonic day 11.5 |
|
|
| Specimen Label: |
4b |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4882492 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1609219 |
| Pattern: |
Regionally restricted |
| Stage: |
TS19 |
| Assay Id: |
MGI:4945200 |
| Age: |
embryonic day 11.5 |
| Image: |
g00669 E11.5 |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g00669 E11.5 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4882492 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3266028 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:4945200 |
| Age: |
postnatal day 7 |
| Image: |
g00669 P7 |
|
| Specimen Label: |
g00669 P7 |
| Detected: |
false |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4882492 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3266028 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:4945200 |
| Age: |
postnatal day 42 |
| Image: |
g00669 Adult |
|
| Specimen Label: |
g00669 Adult |
| Detected: |
false |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:2680191 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2003-12-01 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1758222 |
| Pattern: |
Regionally restricted |
| Stage: |
TS22 |
| Assay Id: |
MGI:2680224 |
| Age: |
embryonic day 14.5 |
|
| Note: |
Expression was strong in the ventral motor columns. |
| Specimen Label: |
4d |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2018-07-06 |
| Strength: |
Ambiguous |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:2692222 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:6164609 |
| Age: |
embryonic day 14.5 |
|
|
| Specimen Label: |
Table S7 - E14.5 |
|
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_03 |
|
| Specimen Label: |
euxassay_012159_03 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_04 |
|
| Specimen Label: |
euxassay_012159_04 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_05 |
|
| Specimen Label: |
euxassay_012159_05 |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_06 |
|
| Specimen Label: |
euxassay_012159_06 |
| Detected: |
true |
| Specimen Num: |
5 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_07 |
|
| Specimen Label: |
euxassay_012159_07 |
| Detected: |
true |
| Specimen Num: |
6 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_08 |
|
| Specimen Label: |
euxassay_012159_08 |
| Detected: |
true |
| Specimen Num: |
7 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_16 |
|
| Specimen Label: |
euxassay_012159_16 |
| Detected: |
true |
| Specimen Num: |
15 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_17 |
|
| Specimen Label: |
euxassay_012159_17 |
| Detected: |
true |
| Specimen Num: |
16 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_18 |
|
| Specimen Label: |
euxassay_012159_18 |
| Detected: |
true |
| Specimen Num: |
17 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_19 |
|
| Specimen Label: |
euxassay_012159_19 |
| Detected: |
true |
| Specimen Num: |
18 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_20 |
|
| Specimen Label: |
euxassay_012159_20 |
| Detected: |
true |
| Specimen Num: |
19 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_21 |
|
| Specimen Label: |
euxassay_012159_21 |
| Detected: |
true |
| Specimen Num: |
20 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4400941 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-08-27 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679726 |
| Pattern: |
Regionally restricted |
| Stage: |
TS26 |
| Assay Id: |
MGI:5578585 |
| Age: |
embryonic day 18.5 |
| Image: |
9B |
| Note: |
Expressed in subsets of cell bodies. |
| Specimen Label: |
9B |
| Detected: |
true |
| Specimen Num: |
11 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:2680191 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2003-12-01 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754025 |
| Pattern: |
Not Specified |
| Stage: |
TS25 |
| Assay Id: |
MGI:2680224 |
| Age: |
embryonic day 17.0 |
|
|
| Specimen Label: |
3b |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4882492 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754028 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945200 |
| Age: |
postnatal day 7 |
| Image: |
g00669 P7 |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g00669 P7 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4882492 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1754028 |
| Pattern: |
Widespread |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945200 |
| Age: |
postnatal day 42 |
| Image: |
g00669 Adult |
|
| Specimen Label: |
g00669 Adult |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1756923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_03 |
|
| Specimen Label: |
euxassay_012159_03 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1756923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_04 |
|
| Specimen Label: |
euxassay_012159_04 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1756923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_05 |
|
| Specimen Label: |
euxassay_012159_05 |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1756923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_19 |
|
| Specimen Label: |
euxassay_012159_19 |
| Detected: |
true |
| Specimen Num: |
18 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1756923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_20 |
|
| Specimen Label: |
euxassay_012159_20 |
| Detected: |
true |
| Specimen Num: |
19 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4882492 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3280923 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4945200 |
| Age: |
embryonic day 15.5 |
| Image: |
g00669 E15.5 |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g00669 E15.5 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4882492 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3280928 |
| Pattern: |
Widespread |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945200 |
| Age: |
postnatal day 7 |
| Image: |
g00669 P7 |
|
| Specimen Label: |
g00669 P7 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4882492 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3280928 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945200 |
| Age: |
postnatal day 42 |
| Image: |
g00669 Adult |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g00669 Adult |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4400941 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-08-27 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3280926 |
| Pattern: |
Regionally restricted |
| Stage: |
TS26 |
| Assay Id: |
MGI:5578585 |
| Age: |
embryonic day 18.5 |
| Image: |
2B |
| Note: |
Expressed in cells lining the olfactory ventricule, in the glomerular layer, and at low levels in the olfactory nerve layer. |
| Specimen Label: |
2B |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4400941 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-08-27 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3280928 |
|
| Stage: |
TS28 |
| Assay Id: |
MGI:5578585 |
| Age: |
postnatal day 10 |
| Image: |
2H |
|
| Specimen Label: |
2H |
| Detected: |
false |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:2680191 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2003-12-01 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1715219 |
| Pattern: |
Regionally restricted |
| Stage: |
TS19 |
| Assay Id: |
MGI:2680224 |
| Age: |
embryonic day 11.5 |
|
| Note: |
Expression was strong on the ventral side. |
| Specimen Label: |
4b |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4882492 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3266523 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4945200 |
| Age: |
embryonic day 15.5 |
| Image: |
g00669 E15.5 |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g00669 E15.5 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4400941 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-08-27 |
| Strength: |
Absent |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1761226 |
|
| Stage: |
TS26 |
| Assay Id: |
MGI:5578585 |
| Age: |
embryonic day 18.5 |
|
|
| Specimen Label: |
not shown |
| Detected: |
false |
| Specimen Num: |
13 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679523 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_06 |
|
| Specimen Label: |
euxassay_012159_06 |
| Detected: |
true |
| Specimen Num: |
5 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679523 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_07 |
|
| Specimen Label: |
euxassay_012159_07 |
| Detected: |
true |
| Specimen Num: |
6 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679523 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_18 |
|
| Specimen Label: |
euxassay_012159_18 |
| Detected: |
true |
| Specimen Num: |
17 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:2680191 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2003-12-01 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3270725 |
| Pattern: |
Not Specified |
| Stage: |
TS25 |
| Assay Id: |
MGI:2680224 |
| Age: |
embryonic day 17.0 |
|
|
| Specimen Label: |
3h |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4400941 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-08-27 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:3270726 |
| Pattern: |
Regionally restricted |
| Stage: |
TS26 |
| Assay Id: |
MGI:5578585 |
| Age: |
embryonic day 18.5 |
| Image: |
3C |
| Note: |
Expressed in the basal layer. |
| Specimen Label: |
3C |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4882492 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757723 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4945200 |
| Age: |
embryonic day 15.5 |
| Image: |
g00669 E15.5 |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g00669 E15.5 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4882492 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757728 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945200 |
| Age: |
postnatal day 7 |
| Image: |
g00669 P7 |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g00669 P7 |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4882492 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2011-04-11 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757728 |
| Pattern: |
Regionally restricted |
| Stage: |
TS28 |
| Assay Id: |
MGI:4945200 |
| Age: |
postnatal day 42 |
| Image: |
g00669 Adult |
| Note: |
Expression was region specific and scattered. |
| Specimen Label: |
g00669 Adult |
| Detected: |
true |
| Specimen Num: |
4 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4400941 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-08-27 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1757726 |
| Pattern: |
Regionally restricted |
| Stage: |
TS26 |
| Assay Id: |
MGI:5578585 |
| Age: |
embryonic day 18.5 |
| Image: |
8B |
| Note: |
Expressed in the gray matter. Higher levels of expression are observed in the ventral part where motor neurons are located. |
| Specimen Label: |
8B |
| Detected: |
true |
| Specimen Num: |
10 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4424023 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2010-09-14 |
| Strength: |
Moderate |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1679823 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:4828305 |
| Age: |
embryonic day 14.5 |
| Image: |
euxassay_012159_07 |
|
| Specimen Label: |
euxassay_012159_07 |
| Detected: |
true |
| Specimen Num: |
6 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3609760 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-01-16 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689422 |
| Pattern: |
Not Specified |
| Stage: |
TS22 |
| Assay Id: |
MGI:3610165 |
| Age: |
embryonic day 14.5 |
|
|
| Specimen Label: |
1 slitrk E14.5 |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:3609760 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2006-01-16 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689424 |
| Pattern: |
Not Specified |
| Stage: |
TS24 |
| Assay Id: |
MGI:3610165 |
| Age: |
embryonic day 16.5 |
|
|
| Specimen Label: |
1 slitrk E16.5 |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:4400941 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2014-08-27 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689426 |
| Pattern: |
Widespread |
| Stage: |
TS26 |
| Assay Id: |
MGI:5578585 |
| Age: |
embryonic day 18.5 |
| Image: |
1B |
| Note: |
Expressed widely in the brain. Highly expressed in the neuroepithelium. |
| Specimen Label: |
1B |
| Detected: |
true |
| Specimen Num: |
1 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Han KA |
| Year: |
2019 |
| Journal: |
Sci Rep |
| Title: |
Slitrk2 controls excitatory synapse development via PDZ-mediated protein interactions. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
17094 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Morimoto K |
| Year: |
2020 |
| Journal: |
Sci Rep |
| Title: |
Reverse genetics reveals single gene of every candidate on Hybrid sterility, X Chromosome QTL 2 (Hstx2) are dispensable for spermatogenesis. |
| Volume: |
10 |
| Issue: |
1 |
| Pages: |
9060 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Aruga J |
| Year: |
2003 |
| Journal: |
Gene |
| Title: |
Human SLITRK family genes: genomic organization and expression profiling in normal brain and brain tumor tissue. |
| Volume: |
315 |
|
| Pages: |
87-94 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Beaubien F |
| Year: |
2009 |
| Journal: |
Dev Dyn |
| Title: |
Differential expression of Slitrk family members in the mouse nervous system. |
| Volume: |
238 |
| Issue: |
12 |
| Pages: |
3285-96 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Matsumoto Y |
| Year: |
2024 |
| Journal: |
Front Mol Neurosci |
| Title: |
Slitrk4 is required for the development of inhibitory neurons in the fear memory circuit of the lateral amygdala. |
| Volume: |
17 |
|
| Pages: |
1386924 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Um JW |
| Year: |
2014 |
| Journal: |
Cell Rep |
| Title: |
Calsyntenins function as synaptogenic adhesion molecules in concert with neurexins. |
| Volume: |
6 |
| Issue: |
6 |
| Pages: |
1096-1109 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yoshida Y |
| Year: |
2006 |
| Journal: |
Neuron |
| Title: |
PlexinA1 signaling directs the segregation of proprioceptive sensory axons in the developing spinal cord. |
| Volume: |
52 |
| Issue: |
5 |
| Pages: |
775-88 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jensen P |
| Year: |
2004 |
| Journal: |
Brain Res Mol Brain Res |
| Title: |
A neurogenomics approach to gene expression analysis in the developing brain. |
| Volume: |
132 |
| Issue: |
2 |
| Pages: |
116-27 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Memic F |
| Year: |
2018 |
| Journal: |
Gastroenterology |
| Title: |
Transcription and Signaling Regulators in Developing Neuronal Subtypes of Mouse and Human Enteric Nervous System. |
| Volume: |
154 |
| Issue: |
3 |
| Pages: |
624-636 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGI and IMPC |
| Year: |
2017 |
| Journal: |
MGI Direct Data Submission |
| Title: |
MGI Curation of Endonuclease-Mediated Alleles (CRISPR) from the International Mouse Phenotyping Consortium (IMPC) |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2003 |
| Journal: |
Database Download |
| Title: |
Integrating Computational Gene Models into the Mouse Genome Informatics (MGI) Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
FANTOM2 Data Curation in Mouse Genome Informatics |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Velocigene |
| Year: |
2008 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC) |
| Year: |
2014 |
| Journal: |
Database Release |
| Title: |
Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2014 |
|
| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Magdaleno S |
| Year: |
2006 |
| Journal: |
PLoS Biol |
| Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
| Volume: |
4 |
| Issue: |
4 |
| Pages: |
e86 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Adams DJ |
| Year: |
2024 |
| Journal: |
Nature |
| Title: |
Genetic determinants of micronucleus formation in vivo. |
| Volume: |
627 |
| Issue: |
8002 |
| Pages: |
130-136 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
| Year: |
2011 |
|
| Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
GOA curators |
| Year: |
2016 |
|
| Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2010 |
|
| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Diez-Roux G |
| Year: |
2011 |
| Journal: |
PLoS Biol |
| Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
e1000582 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
|
| Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Slitrk2/? Tg(Nes-cre)1Atp/? |
| Background: |
involves: C57BL/6J * FVB/N |
| Zygosity: |
cn |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| DO Term |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Beaubien F |
| Year: |
2016 |
| Journal: |
Sci Rep |
| Title: |
Slitrk1 is localized to excitatory synapses and promotes their development. |
| Volume: |
6 |
|
| Pages: |
27343 |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
Baseline |
| Source: |
GEO |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
247
 |
| Fragment?: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Won SY |
| Year: |
2019 |
| Journal: |
Curr Opin Struct Biol |
| Title: |
Synaptic organizer: Slitrks and type IIa receptor protein tyrosine phosphatases. |
| Volume: |
54 |
|
| Pages: |
95-103 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yim YS |
| Year: |
2013 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Slitrks control excitatory and inhibitory synapse formation with LAR receptor protein tyrosine phosphatases. |
| Volume: |
110 |
| Issue: |
10 |
| Pages: |
4057-62 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Won SY |
| Year: |
2018 |
| Journal: |
Mol Cells |
| Title: |
Structural Basis for LAR-RPTP-Mediated Synaptogenesis. |
| Volume: |
41 |
| Issue: |
7 |
| Pages: |
622-630 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wallace MJ |
| Year: |
1998 |
| Journal: |
Mol Cell Biol |
| Title: |
The second catalytic domain of protein tyrosine phosphatase delta (PTP delta) binds to and inhibits the first catalytic domain of PTP sigma. |
| Volume: |
18 |
| Issue: |
5 |
| Pages: |
2608-16 |
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| Publication |
| First Author: |
Um JW |
| Year: |
2013 |
| Journal: |
Trends Cell Biol |
| Title: |
LAR-RPTPs: synaptic adhesion molecules that shape synapse development. |
| Volume: |
23 |
| Issue: |
10 |
| Pages: |
465-75 |
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| Publication |
| First Author: |
Tomita H |
| Year: |
2020 |
| Journal: |
Cell Rep |
| Title: |
The Protein Tyrosine Phosphatase Receptor Delta Regulates Developmental Neurogenesis. |
| Volume: |
30 |
| Issue: |
1 |
| Pages: |
215-228.e5 |
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| Publication |
| First Author: |
Han KA |
| Year: |
2016 |
| Journal: |
Int Rev Cell Mol Biol |
| Title: |
Emergent Synapse Organizers: LAR-RPTPs and Their Companions. |
| Volume: |
324 |
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| Pages: |
39-65 |
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| Protein Domain |
| Type: |
Family |
| Description: |
The Slitrk family comprises six vertebrate members (Slitrk1-6) that are highly expressed in the central nervous system (CNS), where they modulate neurite outgrowth. In humans, Slitrk1-6 are neuronal transmembrane proteins and are key synapse organizers at neuronal synapses through interactions with specific members of the presynaptic type IIa receptor protein tyrosine phosphatase (RPTP) family []. They contain two consecutive extracellular LRR modules, LRR1 and LRR2, and a single transmembrane domain, followed by an intracellular domain that is homologous to Trks. Mutations in human SLITRKs have been implicated in several neuropsychiatric disorders, including Tourette's syndrome, schizophrenia, trichotillomania and obsessive-compulsive disorder (OCD) []. Slitrk1 and Slitrk2 have been shown to regulate synapse formation between hippocampal neurons []. |
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| Protein Domain |
| Type: |
Domain |
| Description: |
Receptor-type tyrosine-protein phosphatase delta (R-PTP-delta, also known as PTPRD), belongs to the LAR (leukocyte common antigen-related) family of receptor-type tyrosine-protein phosphatases (RPTPs), which belong to the larger family of classical tyrosine-specific protein tyrosine phosphatases (PTPs). PTPs () catalyze the dephosphorylation of phosphotyrosine peptides. LAR-RPTPs are synaptic adhesion molecules that play roles in various aspects of neuronal development, including axon guidance, neurite extension, and synapse formation and function [, , ]. PTPRD is involved in pre-synaptic differentiation through interaction with SLITRK2 [, ]. It contains an extracellular region with three immunoglobulin-like (Ig) domains and four to eight fibronectin type III (FN3) repeats (determined by alternative splicing), a single transmembrane domain, followed by an intracellular region with a membrane-proximal catalytic PTP domain (repeat 1, also called D1) and a membrane-distal non-catalytic PTP-like domain (repeat 2, also called D2) [, , ].This entry represents the catalytic PTP domain (repeat 1) found in the protein PTPRD from chordates. |
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