Type |
Details |
Score |
Protein Domain |
Type: |
Domain |
Description: |
This is the ubiquitin-like domain (ULD) found in TANK-binding kinase 1 (TBK1). TBK1 is a serine/threonine kinase and a noncanonical member of the IKK family implicated in diverse cellular functions, including innate immune response as well as tumorigenesis and development []. It has been reported that the ULD of TBK1 regulates kinase activity, playing an important role in signaling and mediating interactions with other molecules in the IFN pathway. Deletion of ULD indicates that it is required for the kinase domain to form an enzymatically active conformation. TBK1 ULD has a ubiquitin-like structure and an Ile44 hydrophobic patch, which is conserved among ULDs and IKK and IKK-related proteins. This hydrophobic patch is involved in ULD-SDD interactions in TBK1 and other IKK and IKK-related proteins []. |
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•
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•
•
|
Allele |
Name: |
TRAF family member-associated Nf-kappa B activator; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
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•
•
•
•
•
|
Publication |
First Author: |
Kang HR |
Year: |
2014 |
Journal: |
J Virol |
Title: |
Murine gammaherpesvirus 68 encoding open reading frame 11 targets TANK binding kinase 1 to negatively regulate the host type I interferon response. |
Volume: |
88 |
Issue: |
12 |
Pages: |
6832-46 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rickgauer JP |
Year: |
2014 |
Journal: |
Nat Neurosci |
Title: |
Simultaneous cellular-resolution optical perturbation and imaging of place cell firing fields. |
Volume: |
17 |
Issue: |
12 |
Pages: |
1816-24 |
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•
•
•
•
•
|
Publication |
First Author: |
Osterhout CA |
Year: |
1997 |
Journal: |
J Neurochem |
Title: |
Induction of tyrosine hydroxylase protein and a transgene containing tyrosine hydroxylase 5' flanking sequences by stress in mouse adrenal gland. |
Volume: |
68 |
Issue: |
3 |
Pages: |
1071-7 |
|
•
•
•
•
•
|
Interaction Experiment |
Description: |
NF-kappaB activation by a signaling complex containing TRAF2, TANK and TBK1, a novel IKK-related kinase. |
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•
•
•
•
|
Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
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•
•
|
Publication |
First Author: |
Loercher AE |
Year: |
2005 |
Journal: |
J Cell Biol |
Title: |
MITF links differentiation with cell cycle arrest in melanocytes by transcriptional activation of INK4A. |
Volume: |
168 |
Issue: |
1 |
Pages: |
35-40 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li CL |
Year: |
2014 |
Journal: |
J Neurosci |
Title: |
SRF phosphorylation by glycogen synthase kinase-3 promotes axon growth in hippocampal neurons. |
Volume: |
34 |
Issue: |
11 |
Pages: |
4027-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
Koay SA |
Year: |
2022 |
Journal: |
Neuron |
Title: |
Sequential and efficient neural-population coding of complex task information. |
Volume: |
110 |
Issue: |
2 |
Pages: |
328-349.e11 |
|
•
•
•
•
•
|
Publication |
First Author: |
Deverett B |
Year: |
2019 |
Journal: |
Nat Commun |
Title: |
Cerebellar disruption impairs working memory during evidence accumulation. |
Volume: |
10 |
Issue: |
1 |
Pages: |
3128 |
|
•
•
•
•
•
|
Publication |
First Author: |
Dombeck DA |
Year: |
2007 |
Journal: |
Neuron |
Title: |
Imaging large-scale neural activity with cellular resolution in awake, mobile mice. |
Volume: |
56 |
Issue: |
1 |
Pages: |
43-57 |
|
•
•
•
•
•
|
Publication |
First Author: |
Meshulam L |
Year: |
2017 |
Journal: |
Neuron |
Title: |
Collective Behavior of Place and Non-place Neurons in the Hippocampal Network. |
Volume: |
96 |
Issue: |
5 |
Pages: |
1178-1191.e4 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kanno Y |
Year: |
2010 |
Journal: |
J Recept Signal Transduct Res |
Title: |
TACI induces cIAP1-mediated ubiquitination of NIK by TRAF2 and TANK to limit non-canonical NF-kappaB signaling. |
Volume: |
30 |
Issue: |
2 |
Pages: |
121-32 |
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•
•
•
•
•
|
Publication |
First Author: |
Oakes JA |
Year: |
2017 |
Journal: |
Mol Brain |
Title: |
TBK1: a new player in ALS linking autophagy and neuroinflammation. |
Volume: |
10 |
Issue: |
1 |
Pages: |
5 |
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
607
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Gross V |
Year: |
2002 |
Journal: |
Hypertension |
Title: |
Heart rate variability and baroreflex function in AT2 receptor-disrupted mice. |
Volume: |
40 |
Issue: |
2 |
Pages: |
207-13 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gross V |
Year: |
2005 |
Journal: |
Am J Physiol Regul Integr Comp Physiol |
Title: |
Autonomic nervous system and blood pressure regulation in RGS2-deficient mice. |
Volume: |
288 |
Issue: |
5 |
Pages: |
R1134-42 |
|
•
•
•
•
•
|
Publication |
First Author: |
Obst M |
Year: |
2006 |
Journal: |
Am J Physiol Regul Integr Comp Physiol |
Title: |
NO-dependent blood pressure regulation in RGS2-deficient mice. |
Volume: |
290 |
Issue: |
4 |
Pages: |
R1012-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gu Y |
Year: |
2018 |
Journal: |
Cell |
Title: |
A Map-like Micro-Organization of Grid Cells in the Medial Entorhinal Cortex. |
Volume: |
175 |
Issue: |
3 |
Pages: |
736-750.e30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Goncalves AC |
Year: |
2009 |
Journal: |
Hypertension |
Title: |
Diabetic hypertensive leptin receptor-deficient db/db mice develop cardioregulatory autonomic dysfunction. |
Volume: |
53 |
Issue: |
2 |
Pages: |
387-92 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
717
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
729
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
729
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
717
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
693
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
693
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
da Costa-Goncalves AC |
Year: |
2008 |
Journal: |
Hypertension |
Title: |
Role of the multidomain protein spinophilin in blood pressure and cardiac function regulation. |
Volume: |
52 |
Issue: |
4 |
Pages: |
702-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Barmada SJ |
Year: |
2015 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Amelioration of toxicity in neuronal models of amyotrophic lateral sclerosis by hUPF1. |
Volume: |
112 |
Issue: |
25 |
Pages: |
7821-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Noh T |
Year: |
2009 |
Journal: |
PLoS One |
Title: |
Lef1 haploinsufficient mice display a low turnover and low bone mass phenotype in a gender- and age-specific manner. |
Volume: |
4 |
Issue: |
5 |
Pages: |
e5438 |
|
•
•
•
•
•
|
Publication |
First Author: |
Maimon R |
Year: |
2021 |
Journal: |
EMBO J |
Title: |
A CRMP4-dependent retrograde axon-to-soma death signal in amyotrophic lateral sclerosis. |
|
|
Pages: |
e107586 |
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•
•
•
•
•
|
Publication |
First Author: |
Ryzhakov G |
Year: |
2007 |
Journal: |
EMBO J |
Title: |
SINTBAD, a novel component of innate antiviral immunity, shares a TBK1-binding domain with NAP1 and TANK. |
Volume: |
26 |
Issue: |
13 |
Pages: |
3180-90 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
405
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
178
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
199
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
67
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
The Tbk1/Ikki binding domain (TBD) is a 40 amino acid domain able to bind kinases which is essential for poly(I:C)-induced IRF activation []. The domain is found in the SINTBAD, TANK and NAP1 proteins. This domain is predicted to form an α-helix with residues essential for kinase binding clustering on one side []. |
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•
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•
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Publication |
First Author: |
Willmes DM |
Year: |
2021 |
Journal: |
JCI Insight |
Title: |
The longevity gene mIndy (I'm Not Dead, Yet) affects blood pressure through sympathoadrenal mechanisms. |
Volume: |
6 |
Issue: |
2 |
|
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
GEO |
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•
•
•
•
•
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Publication |
First Author: |
Maass PG |
Year: |
2015 |
Journal: |
Nat Genet |
Title: |
PDE3A mutations cause autosomal dominant hypertension with brachydactyly. |
Volume: |
47 |
Issue: |
6 |
Pages: |
647-53 |
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•
•
•
•
•
|
Publication |
First Author: |
Gitlin AD |
Year: |
2024 |
Journal: |
Immunity |
Title: |
N4BP1 coordinates ubiquitin-dependent crosstalk within the IκB kinase family to limit Toll-like receptor signaling and inflammation. |
Volume: |
57 |
Issue: |
5 |
Pages: |
973-986.e7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Huh JY |
Year: |
2020 |
Journal: |
Cell Metab |
Title: |
TANK-Binding Kinase 1 Regulates the Localization of Acyl-CoA Synthetase ACSL1 to Control Hepatic Fatty Acid Oxidation. |
Volume: |
32 |
Issue: |
6 |
Pages: |
1012-1027.e7 |
|
•
•
•
•
•
|
Publication |
First Author: |
An H |
Year: |
2006 |
Journal: |
Immunity |
Title: |
SHP-2 phosphatase negatively regulates the TRIF adaptor protein-dependent type I interferon and proinflammatory cytokine production. |
Volume: |
25 |
Issue: |
6 |
Pages: |
919-28 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cruz VH |
Year: |
2018 |
Journal: |
Mol Metab |
Title: |
Loss of Tbk1 kinase activity protects mice from diet-induced metabolic dysfunction. |
Volume: |
16 |
|
Pages: |
139-149 |
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•
•
•
•
•
|
Publication |
First Author: |
Wild P |
Year: |
2011 |
Journal: |
Science |
Title: |
Phosphorylation of the autophagy receptor optineurin restricts Salmonella growth. |
Volume: |
333 |
Issue: |
6039 |
Pages: |
228-33 |
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•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This entry represents the non-structural protein 6 (NSP6) from betacoronavirus. Recently, it was reported that SARS-CoV-2 NSP6 binds TANK binding kinase 1 (TBK1) to suppress interferon regulatory factor 3 (IRF3) phosphorylation which suppresses IFN-I signalling and production more efficiently than SARS-CoV and MERS-CoV [].Coronaviruses (CoV) redirect and rearrange host cell membranes as part of the viral genome replication and transcription machinery; they induce the formation of double-membrane vesicles in infected cells. CoV non-structural protein 6 (NSP6), a transmembrane-containing protein, together with NSP3 and NSP4, have the ability to induce double-membrane vesicles that are similar to those observed in severe acute respiratory syndrome (SARS) coronavirus-infected cells []. By itself, NSP6 can generate autophagosomes from the endoplasmic reticulum. Autophagosomes are normally generated as a cellular response to starvation to carry cellular organelles and long-lived proteins to lysosomes for degradation. Degradation through autophagy may provide an innate defense against virus infection, or conversely, autophagosomes can promote infection by facilitating the assembly of replicase proteins []. In additionto initiating autophagosome formation, NSP6 also limits autophagosome expansion regardless of how they were induced, i.e. whether they were induced directly by NSP6, or indirectly by starvation or chemical inhibition of MTOR signalling. This may favour coronavirus infection by compromising the ability of autophagosomes to deliver viral components to lysosomes for degradation []. |
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•
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Publication |
First Author: |
Miyagawa J |
Year: |
1999 |
Journal: |
Gene |
Title: |
Isolation of the novel cDNA of a gene of which expression is induced by a demethylating stimulus. |
Volume: |
240 |
Issue: |
2 |
Pages: |
289-95 |
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•
•
•
•
|
Publication |
First Author: |
Glynn D |
Year: |
2003 |
Journal: |
Hum Mol Genet |
Title: |
Complexin II is essential for normal neurological function in mice. |
Volume: |
12 |
Issue: |
19 |
Pages: |
2431-48 |
|
•
•
•
•
•
|
Publication |
First Author: |
Garcia G Jr |
Year: |
2020 |
Journal: |
Am J Pathol |
Title: |
Hippo Signaling Pathway Has a Critical Role in Zika Virus Replication and in the Pathogenesis of Neuroinflammation. |
Volume: |
190 |
Issue: |
4 |
Pages: |
844-861 |
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•
•
•
•
•
|
Publication |
First Author: |
Li Y |
Year: |
2024 |
Journal: |
FEBS J |
Title: |
TBK1 is involved in M-CSF-induced macrophage polarization through mediating the IRF5/IRF4 axis. |
Volume: |
291 |
Issue: |
23 |
Pages: |
5214-5235 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhou L |
Year: |
2014 |
Journal: |
Hum Mol Genet |
Title: |
Lack of seipin in neurons results in anxiety- and depression-like behaviors via down regulation of PPARγ. |
Volume: |
23 |
Issue: |
15 |
Pages: |
4094-102 |
|
•
•
•
•
•
|
Publication |
First Author: |
Luo W |
Year: |
2022 |
Journal: |
Clin Transl Med |
Title: |
MD2 deficiency prevents high-fat diet-induced AMPK suppression and lipid accumulation through regulating TBK1 in non-alcoholic fatty liver disease. |
Volume: |
12 |
Issue: |
3 |
Pages: |
e777 |
|
•
•
•
•
•
|
Publication |
First Author: |
Cheng WY |
Year: |
2018 |
Journal: |
Front Immunol |
Title: |
The cGas-Sting Signaling Pathway Is Required for the Innate Immune Response Against Ectromelia Virus. |
Volume: |
9 |
|
Pages: |
1297 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tamassia N |
Year: |
2008 |
Journal: |
J Immunol |
Title: |
Activation of an immunoregulatory and antiviral gene expression program in poly(I:C)-transfected human neutrophils. |
Volume: |
181 |
Issue: |
9 |
Pages: |
6563-73 |
|
•
•
•
•
•
|
Publication |
First Author: |
Michallet MC |
Year: |
2008 |
Journal: |
Immunity |
Title: |
TRADD protein is an essential component of the RIG-like helicase antiviral pathway. |
Volume: |
28 |
Issue: |
5 |
Pages: |
651-61 |
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•
•
•
•
•
|
Publication |
First Author: |
Fukasaka M |
Year: |
2013 |
Journal: |
J Immunol |
Title: |
Critical role of AZI2 in GM-CSF-induced dendritic cell differentiation. |
Volume: |
190 |
Issue: |
11 |
Pages: |
5702-11 |
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•
•
•
•
•
|
Publication |
First Author: |
Munitic I |
Year: |
2013 |
Journal: |
J Immunol |
Title: |
Optineurin insufficiency impairs IRF3 but not NF-κB activation in immune cells. |
Volume: |
191 |
Issue: |
12 |
Pages: |
6231-40 |
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•
•
•
•
•
|
Publication |
First Author: |
Hale J |
Year: |
2021 |
Journal: |
Biophys J |
Title: |
αI-spectrin represents evolutionary optimization of spectrin for red blood cell deformability. |
Volume: |
120 |
Issue: |
17 |
Pages: |
3588-3599 |
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•
•
•
•
•
|
Publication |
First Author: |
Cardiff RD |
Year: |
2001 |
Journal: |
Microsc Res Tech |
Title: |
Validity of mouse mammary tumour models for human breast cancer: comparative pathology. |
Volume: |
52 |
Issue: |
2 |
Pages: |
224-30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Klapdor K |
Year: |
1996 |
Journal: |
Physiol Behav |
Title: |
The Morris water-escape task in mice: strain differences and effects of intra-maze contrast and brightness. |
Volume: |
60 |
Issue: |
5 |
Pages: |
1247-54 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kathmann EC |
Year: |
1997 |
Journal: |
Biochem Biophys Res Commun |
Title: |
Cloning of a cDNA encoding a constitutively expressed rat liver cytosolic aldehyde dehydrogenase. |
Volume: |
236 |
Issue: |
2 |
Pages: |
527-31 |
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•
•
•
•
•
|
Publication |
First Author: |
Brooks SP |
Year: |
2004 |
Journal: |
Genes Brain Behav |
Title: |
Behavioural profiles of inbred mouse strains used as transgenic backgrounds. I: motor tests. |
Volume: |
3 |
Issue: |
4 |
Pages: |
206-15 |
|
•
•
•
•
•
|
Publication |
First Author: |
Qu F |
Year: |
2012 |
Journal: |
Mol Cell Biol |
Title: |
TRAF6-dependent Act1 phosphorylation by the IκB kinase-related kinases suppresses interleukin-17-induced NF-κB activation. |
Volume: |
32 |
Issue: |
19 |
Pages: |
3925-37 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lafont E |
Year: |
2018 |
Journal: |
Nat Cell Biol |
Title: |
TBK1 and IKKε prevent TNF-induced cell death by RIPK1 phosphorylation. |
Volume: |
20 |
Issue: |
12 |
Pages: |
1389-1399 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang Y |
Year: |
2021 |
Journal: |
Nat Commun |
Title: |
Cerebellar Kv3.3 potassium channels activate TANK-binding kinase 1 to regulate trafficking of the cell survival protein Hax-1. |
Volume: |
12 |
Issue: |
1 |
Pages: |
1731 |
|
•
•
•
•
•
|
Publication |
First Author: |
Guo R |
Year: |
2023 |
Journal: |
ESC Heart Fail |
Title: |
Rnf144b alleviates the inflammatory responses and cardiac dysfunction in sepsis. |
Volume: |
10 |
Issue: |
4 |
Pages: |
2338-2344 |
|
•
•
•
•
•
|
Publication |
First Author: |
Burdette DL |
Year: |
2011 |
Journal: |
Nature |
Title: |
STING is a direct innate immune sensor of cyclic di-GMP. |
Volume: |
478 |
Issue: |
7370 |
Pages: |
515-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Lee DH |
Year: |
2020 |
Journal: |
Autophagy |
Title: |
SQSTM1/p62 activates NFE2L2/NRF2 via ULK1-mediated autophagic KEAP1 degradation and protects mouse liver from lipotoxicity. |
Volume: |
16 |
Issue: |
11 |
Pages: |
1949-1973 |
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•
•
•
•
•
|
Publication |
First Author: |
Ono C |
Year: |
2014 |
Journal: |
J Virol |
Title: |
Innate immune response induced by baculovirus attenuates transgene expression in mammalian cells. |
Volume: |
88 |
Issue: |
4 |
Pages: |
2157-67 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jankowski MP |
Year: |
2006 |
Journal: |
Neuroscience |
Title: |
SRY-box containing gene 11 (Sox11) transcription factor is required for neuron survival and neurite growth. |
Volume: |
143 |
Issue: |
2 |
Pages: |
501-14 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang Y |
Year: |
2023 |
Journal: |
Front Immunol |
Title: |
cGAS-STING signaling pathway in intestinal homeostasis and diseases. |
Volume: |
14 |
|
Pages: |
1239142 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
611
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
610
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Angelini MM |
Year: |
2013 |
Journal: |
mBio |
Title: |
Severe acute respiratory syndrome coronavirus nonstructural proteins 3, 4, and 6 induce double-membrane vesicles. |
Volume: |
4 |
Issue: |
4 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Cottam EM |
Year: |
2014 |
Journal: |
Autophagy |
Title: |
Coronavirus NSP6 restricts autophagosome expansion. |
Volume: |
10 |
Issue: |
8 |
Pages: |
1426-41 |
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Publication |
First Author: |
Cottam EM |
Year: |
2011 |
Journal: |
Autophagy |
Title: |
Coronavirus nsp6 proteins generate autophagosomes from the endoplasmic reticulum via an omegasome intermediate. |
Volume: |
7 |
Issue: |
11 |
Pages: |
1335-47 |
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Publication |
First Author: |
Xia H |
Year: |
2020 |
Journal: |
Cell Rep |
Title: |
Evasion of Type I Interferon by SARS-CoV-2. |
Volume: |
33 |
Issue: |
1 |
Pages: |
108234 |
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Publication |
First Author: |
Gerhard DS |
Year: |
2004 |
Journal: |
Genome Res |
Title: |
The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). |
Volume: |
14 |
Issue: |
10B |
Pages: |
2121-7 |
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