Type |
Details |
Score |
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
|
Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
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•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
TDRD5 belongs to the evolutionary conserved Tudor domain-containing protein (TDRD) family involved in germ cell development. In mice, TDRD5 is a component of the intermitochondrial cements (IMCs) and the chromatoid bodies (CBs), which are cytoplasmic ribonucleoprotein granules involved in RNA processing for spermatogenesis [].TDRD5 contains three N-terminal LOTUS domains and a C-terminal Tudor domain. This entry represents the second LOTUS domain of TDRD5. The LOTUS domain adopts the winged helix-turn-helix fold and may bind RNA [, ]. |
|
•
•
•
•
•
|
Publication |
First Author: |
Hosokawa M |
Year: |
2007 |
Journal: |
Dev Biol |
Title: |
Tudor-related proteins TDRD1/MTR-1, TDRD6 and TDRD7/TRAP: domain composition, intracellular localization, and function in male germ cells in mice. |
Volume: |
301 |
Issue: |
1 |
Pages: |
38-52 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
TDRD7 belongs to the evolutionary conserved Tudor domain-containing protein (TDRD) family involved in germ cell development. In mice, TDRD7 together with TDRD1/MTR-1, TDRD5 and TDRD6 forms a ribonucleoprotein complex in the intermitochondrial cements (IMCs) and the chromatoid bodies (CBs) involved in RNA processing for spermatogenesis. TDRD7 is functionally essential for the differentiation of germ cells [].TDRD7 contains three N-terminal LOTUS domains and three Tudor domain repeats at the C terminus. The LOTUS domain adopts the winged helix-turn-helix fold that may bind RNA [, ]. This entry represents the third LOTUS domain of TDRD7. |
|
•
•
•
•
•
|
Publication |
First Author: |
Anantharaman V |
Year: |
2010 |
Journal: |
Biol Direct |
Title: |
OST-HTH: a novel predicted RNA-binding domain. |
Volume: |
5 |
|
Pages: |
13 |
|
•
•
•
•
•
|
Publication |
First Author: |
Callebaut I |
Year: |
2010 |
Journal: |
Bioinformatics |
Title: |
LOTUS, a new domain associated with small RNA pathways in the germline. |
Volume: |
26 |
Issue: |
9 |
Pages: |
1140-4 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1040
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1086
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1119
 |
Fragment?: |
false |
|
•
•
•
•
•
|