| Type |
Details |
Score |
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
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| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
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•
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•
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| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2010 |
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| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
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•
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•
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| Publication |
| First Author: |
Diez-Roux G |
| Year: |
2011 |
| Journal: |
PLoS Biol |
| Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
e1000582 |
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•
•
•
•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
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| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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•
•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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•
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| Publication |
| First Author: |
MGI Genome Annotation Group and UniGene Staff |
| Year: |
2015 |
| Journal: |
Database Download |
| Title: |
MGI-UniGene Interconnection Effort |
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•
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•
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| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
|
| Title: |
Annotation inferences using phylogenetic trees |
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•
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•
•
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| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
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•
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| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
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•
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•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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•
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| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
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•
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| Publication |
| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
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•
•
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| Publication |
| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
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•
•
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•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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•
•
•
•
•
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| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
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•
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•
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•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
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| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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•
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•
•
•
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| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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•
|
| UniProt Feature |
| Begin: |
1 |
| Description: |
E3 ubiquitin-protein ligase TRIM21 |
| Type: |
chain |
| End: |
470 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Cheng J |
| Year: |
2020 |
| Journal: |
Nat Commun |
| Title: |
TRIM21 and PHLDA3 negatively regulate the crosstalk between the PI3K/AKT pathway and PPP metabolism. |
| Volume: |
11 |
| Issue: |
1 |
| Pages: |
1880 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Watkinson RE |
| Year: |
2015 |
| Journal: |
PLoS Pathog |
| Title: |
TRIM21 Promotes cGAS and RIG-I Sensing of Viral Genomes during Infection by Antibody-Opsonized Virus. |
| Volume: |
11 |
| Issue: |
10 |
| Pages: |
e1005253 |
|
•
•
•
•
•
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| Publication |
| First Author: |
Liu J |
| Year: |
2023 |
| Journal: |
J Clin Invest |
| Title: |
The ubiquitin ligase TRIM21 regulates mutant p53 accumulation and gain of function in cancer. |
| Volume: |
133 |
| Issue: |
6 |
|
|
•
•
•
•
•
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| Interaction Experiment |
| Description: |
TRIM21 is an IgG receptor that is structurally, thermodynamically, and kinetically conserved. |
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•
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| Interaction Experiment |
| Description: |
The E3 ubiquitin ligase TRIM21 negatively regulates the innate immune response to intracellular double-stranded DNA. |
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•
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| Publication |
| First Author: |
Keeble AH |
| Year: |
2008 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
TRIM21 is an IgG receptor that is structurally, thermodynamically, and kinetically conserved. |
| Volume: |
105 |
| Issue: |
16 |
| Pages: |
6045-50 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yang K |
| Year: |
2009 |
| Journal: |
J Immunol |
| Title: |
TRIM21 is essential to sustain IFN regulatory factor 3 activation during antiviral response. |
| Volume: |
182 |
| Issue: |
6 |
| Pages: |
3782-92 |
|
•
•
•
•
•
|
| Allele |
| Name: |
tripartite motif-containing 21; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Null/knockout |
|
•
•
•
•
•
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| Strain |
| Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
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•
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| Publication |
| First Author: |
Wei Z |
| Year: |
2018 |
| Journal: |
Nat Commun |
| Title: |
Deacetylation of serine hydroxymethyl-transferase 2 by SIRT3 promotes colorectal carcinogenesis. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
4468 |
|
•
•
•
•
•
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| Publication |
| First Author: |
Xie S |
| Year: |
2020 |
| Journal: |
J Biol Chem |
| Title: |
HDAC6 regulates antibody-dependent intracellular neutralization of viruses via deacetylation of TRIM21. |
| Volume: |
295 |
| Issue: |
42 |
| Pages: |
14343-14351 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Deng R |
| Year: |
2024 |
| Journal: |
iScience |
| Title: |
ISG12a promotes immunotherapy of HBV-associated hepatocellular carcinoma through blocking TRIM21/AKT/β-catenin/PD-L1 axis. |
| Volume: |
27 |
| Issue: |
4 |
| Pages: |
109533 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hauler F |
| Year: |
2012 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
AAA ATPase p97/VCP is essential for TRIM21-mediated virus neutralization. |
| Volume: |
109 |
| Issue: |
48 |
| Pages: |
19733-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Shibata N |
| Year: |
2015 |
| Journal: |
J Biol Chem |
| Title: |
Degradation of Stop Codon Read-through Mutant Proteins via the Ubiquitin-Proteasome System Causes Hereditary Disorders. |
| Volume: |
290 |
| Issue: |
47 |
| Pages: |
28428-37 |
|
•
•
•
•
•
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| Publication |
| First Author: |
Kong X |
| Year: |
2023 |
| Journal: |
Cell Rep |
| Title: |
Type I interferon/STAT1 signaling regulates UBE2M-mediated antiviral innate immunity in a negative feedback manner. |
| Volume: |
42 |
| Issue: |
1 |
| Pages: |
112002 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
James LC |
| Year: |
2007 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Structural basis for PRYSPRY-mediated tripartite motif (TRIM) protein function. |
| Volume: |
104 |
| Issue: |
15 |
| Pages: |
6200-5 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Oke V |
| Year: |
2012 |
| Journal: |
J Autoimmun |
| Title: |
The immunobiology of Ro52 (TRIM21) in autoimmunity: a critical review. |
| Volume: |
39 |
| Issue: |
1-2 |
| Pages: |
77-82 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Espinosa A |
| Year: |
2006 |
| Journal: |
J Immunol |
| Title: |
The Sjogren's syndrome-associated autoantigen Ro52 is an E3 ligase that regulates proliferation and cell death. |
| Volume: |
176 |
| Issue: |
10 |
| Pages: |
6277-85 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Domain |
| Description: |
This domain, consisting of the distinct N-terminal PRY subdomain followed by the SPRY subdomain, is found at the C terminus of TRIM21, which is also known as Sjogren Syndrome Antigen A (SSA), SSA1, 52kDa Ribonucleoprotein Autoantigen (Ro52, Ro/SSA, SS-A/Ro) or RING finger protein 81 (RNF81). TRIM proteins are defined by the presence of the tripartite motif RING/B-box/coiled-coil region and also known as RBCC proteins []. As an E3 ligase, TRIM21 mediates target specificity in ubiquitination; it regulates type 1 interferon and proinflammatory cytokines via ubiquitination of interferon regulatory factors (IRFs) [, ]. It is up-regulated at the site of autoimmune inflammation, such as cutaneous lupus lesions, indicating a central role in the tissue destructive inflammatory process []. It interacts with auto-antigens in patients with Sjogren syndrome and systemic lupus erythematosus, a chronic systemic autoimmune disease characterized by the presence of autoantibodies against the protein component of the human intracellular ribonucleoprotein-RNA complexes and more specifically TRIM21, Ro60/TROVE2 and La/SSB proteins []. It binds the Fc part of IgG molecules via its PRY-SPRY domain with unexpectedly high affinity [, ]. |
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•
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•
•
•
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| Publication |
| First Author: |
Sjöstrand M |
| Year: |
2013 |
| Journal: |
J Immunol |
| Title: |
Expression of the immune regulator tripartite-motif 21 is controlled by IFN regulatory factors. |
| Volume: |
191 |
| Issue: |
7 |
| Pages: |
3753-63 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Israel S |
| Year: |
2019 |
| Journal: |
BMC Genomics |
| Title: |
A framework for TRIM21-mediated protein depletion in early mouse embryos: recapitulation of Tead4 null phenotype over three days. |
| Volume: |
20 |
| Issue: |
1 |
| Pages: |
755 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Meroni G |
| Year: |
2005 |
| Journal: |
Bioessays |
| Title: |
TRIM/RBCC, a novel class of 'single protein RING finger' E3 ubiquitin ligases. |
| Volume: |
27 |
| Issue: |
11 |
| Pages: |
1147-57 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
470
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
462
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
462
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Huttlin EL |
| Year: |
2010 |
| Journal: |
Cell |
| Title: |
A tissue-specific atlas of mouse protein phosphorylation and expression. |
| Volume: |
143 |
| Issue: |
7 |
| Pages: |
1174-89 |
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•
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