Type |
Details |
Score |
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2013-03-05 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1691617 |
Pattern: |
Regionally restricted |
Stage: |
TS17 |
Assay Id: |
MGI:5467409 |
Age: |
embryonic day 10.5 |
|
Note: |
The region of the neuroepithelium from which the expressing cells derive corresponds to the region of Jag1 expression in the ventricular zone. |
Specimen Label: |
not shown |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2013-03-05 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1609217 |
Pattern: |
Regionally restricted |
Stage: |
TS17 |
Assay Id: |
MGI:5467409 |
Age: |
embryonic day 10.5 |
|
Note: |
The region of the neuroepithelium from which the expressing cells derive corresponds to the region of Jag1 expression in the ventricular zone. |
Specimen Label: |
not shown |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2013-03-05 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1609219 |
Pattern: |
Regionally restricted |
Stage: |
TS19 |
Assay Id: |
MGI:5467409 |
Age: |
embryonic day 11.5 |
|
Note: |
The region of the neuroepithelium from which the expressing cells derive corresponds to the region of Jag1 expression in the ventricular zone. |
Specimen Label: |
not shown |
Detected: |
true |
Specimen Num: |
7 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5762877 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2021-09-28 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3283220 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:6763035 |
Age: |
embryonic day 12.5 |
Image: |
10H |
Note: |
Jag1 and Sox2 exhibited largely overlapping expression in anterior and lateral cristae. In the anterior cristae, expression had a negative patch in the middle, whereas Sox2 expression did not. |
Specimen Label: |
10H |
Detected: |
true |
Specimen Num: |
9 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5762877 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2021-09-28 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3283220 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:6763035 |
Age: |
embryonic day 12.5 |
Image: |
10B |
Note: |
Jag1 and Sox2 exhibited largely overlapping expression in posterior cristae and saccular macula. In the posterior cristae, expression had a negative patch in the middle, whereas Sox2 expression did not. |
Specimen Label: |
10B |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5506718 |
Assay Type: |
RNA in situ |
Annotation Date: |
2016-01-20 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1759820 |
Pattern: |
Regionally restricted |
Stage: |
TS20 |
Assay Id: |
MGI:5704120 |
Age: |
embryonic day 12.5 |
Image: |
1C |
Note: |
Expressed in the portion of the cochlea opposite to the thickened epithelium. No longer expressed at the epithelial thickening and did not overlap with either Sox2 or Jag1 expression. |
Specimen Label: |
1C |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:5506718 |
Assay Type: |
RNA in situ |
Annotation Date: |
2016-01-20 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1759821 |
Pattern: |
Regionally restricted |
Stage: |
TS21 |
Assay Id: |
MGI:5704120 |
Age: |
embryonic day 13.5 |
Image: |
1D |
Note: |
Expressed in the portion of the cochlea opposite to the thickened epithelium. No longer expressed at the epithelial thickening and did not overlap with either Sox2 or Jag1 expression. |
Specimen Label: |
1D |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant stock, transgenic |
|
•
•
•
•
•
|
Genotype |
Symbol: |
Tg(Cdh5-tTA)D5Lbjn/? Tg(tetO-Jag1)1Rha/? |
Background: |
Not Specified |
Zygosity: |
cn |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
Baseline |
Source: |
GEO |
|
•
•
•
•
•
|
Publication |
First Author: |
McMillan BJ |
Year: |
2015 |
Journal: |
Mol Cell |
Title: |
A tail of two sites: a bipartite mechanism for recognition of notch ligands by mind bomb E3 ligases. |
Volume: |
57 |
Issue: |
5 |
Pages: |
912-924 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
The REP domain of Mind bomb which serves as the substrate recognition domain for a second, membrane-distal epitope of the Notch ligand (C-box). Although the first Mib repeat of REP may play a dominant role in ligand binding, the two repeats appear to cooperate in the engagement of the Jag1 tail. Mind bomb (Mib) proteins are large, multi-domain E3 ligases that promote ubiquitination of the cytoplasmic tails of Notch ligands. The structure and functional analysis, show that Mib1 contains two independent substrate recognition domains that engage two distinct epitopes from the cytoplasmic tail of the ligand Jagged1, one in the intracellular membrane proximal region and the other near the C terminus. REP domains have a five-stranded anti-parallel twisted beta sheet topology similar to that of SH3 domains []. |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE31643 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
HT Experiment |
|
Experiment Type: |
RNA-Seq |
Study Type: |
Baseline |
Source: |
GEO |
|
•
•
•
•
•
|
Publication |
First Author: |
Zhang Q |
Year: |
2021 |
Journal: |
J Clin Invest |
Title: |
Genomic variants within chromosome 14q32.32 regulate bone mass through MARK3 signaling in osteoblasts. |
Volume: |
131 |
Issue: |
7 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hu X |
Year: |
2013 |
Journal: |
Cell Rep |
Title: |
BACE1 regulates hippocampal astrogenesis via the Jagged1-Notch pathway. |
Volume: |
4 |
Issue: |
1 |
Pages: |
40-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
McKimpson WM |
Year: |
2024 |
Journal: |
J Cell Biol |
Title: |
Calorie restriction activates a gastric Notch-FOXO1 pathway to expand ghrelin cells. |
Volume: |
223 |
Issue: |
10 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Liu P |
Year: |
2022 |
Journal: |
iScience |
Title: |
Endothelial Shp2 deficiency controls alternative activation of macrophage preventing radiation-induced lung injury through notch signaling. |
Volume: |
25 |
Issue: |
3 |
Pages: |
103867 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hunkapiller NM |
Year: |
2011 |
Journal: |
Development |
Title: |
A role for Notch signaling in trophoblast endovascular invasion and in the pathogenesis of pre-eclampsia. |
Volume: |
138 |
Issue: |
14 |
Pages: |
2987-98 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sanghez V |
Year: |
2017 |
Journal: |
PLoS One |
Title: |
Notch activation is required for downregulation of HoxA3-dependent endothelial cell phenotype during blood formation. |
Volume: |
12 |
Issue: |
10 |
Pages: |
e0186818 |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE67889 |
Experiment Type: |
RNA-Seq |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Publication |
First Author: |
Donovan J |
Year: |
2002 |
Journal: |
Curr Biol |
Title: |
Tetralogy of fallot and other congenital heart defects in Hey2 mutant mice. |
Volume: |
12 |
Issue: |
18 |
Pages: |
1605-10 |
|
•
•
•
•
•
|
Publication |
First Author: |
Xiao SM |
Year: |
2012 |
Journal: |
Hum Mol Genet |
Title: |
Post-genome wide association studies and functional analyses identify association of MPP7 gene variants with site-specific bone mineral density. |
Volume: |
21 |
Issue: |
7 |
Pages: |
1648-57 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jaaro-Peled H |
Year: |
2022 |
Journal: |
Transl Psychiatry |
Title: |
Sex-specific involvement of the Notch-JAG pathway in social recognition. |
Volume: |
12 |
Issue: |
1 |
Pages: |
99 |
|
•
•
•
•
•
|
Publication |
First Author: |
Banerjee D |
Year: |
2015 |
Journal: |
Cancer Res |
Title: |
Notch suppresses angiogenesis and progression of hepatic metastases. |
Volume: |
75 |
Issue: |
8 |
Pages: |
1592-602 |
|
•
•
•
•
•
|
Publication |
First Author: |
Majumder S |
Year: |
2018 |
Journal: |
J Clin Invest |
Title: |
Shifts in podocyte histone H3K27me3 regulate mouse and human glomerular disease. |
Volume: |
128 |
Issue: |
1 |
Pages: |
483-499 |
|
•
•
•
•
•
|
Publication |
First Author: |
Riascos-Bernal DF |
Year: |
2017 |
Journal: |
Arterioscler Thromb Vasc Biol |
Title: |
Inhibition of Smooth Muscle β-Catenin Hinders Neointima Formation After Vascular Injury. |
Volume: |
37 |
Issue: |
5 |
Pages: |
879-888 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sakai H |
Year: |
2017 |
Journal: |
PLoS One |
Title: |
Notch ligands regulate the muscle stem-like state ex vivo but are not sufficient for retaining regenerative capacity. |
Volume: |
12 |
Issue: |
5 |
Pages: |
e0177516 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ong CT |
Year: |
2008 |
Journal: |
PLoS One |
Title: |
Notch and presenilin regulate cellular expansion and cytokine secretion but cannot instruct Th1/Th2 fate acquisition. |
Volume: |
3 |
Issue: |
7 |
Pages: |
e2823 |
|
•
•
•
•
•
|
Publication |
First Author: |
Redeker C |
Year: |
2013 |
Journal: |
PLoS One |
Title: |
Normal development in mice over-expressing the intracellular domain of DLL1 argues against reverse signaling by DLL1 in vivo. |
Volume: |
8 |
Issue: |
10 |
Pages: |
e79050 |
|
•
•
•
•
•
|
Publication |
First Author: |
Fischer A |
Year: |
2004 |
Journal: |
Mamm Genome |
Title: |
Phenotypic variability in Hey2 -/- mice and absence of HEY2 mutations in patients with congenital heart defects or Alagille syndrome. |
Volume: |
15 |
Issue: |
9 |
Pages: |
711-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Krebs LT |
Year: |
2016 |
Journal: |
Genesis |
Title: |
Notch signal reception is required in vascular smooth muscle cells for ductus arteriosus closure. |
Volume: |
54 |
Issue: |
2 |
Pages: |
86-90 |
|
•
•
•
•
•
|
Publication |
First Author: |
Li A |
Year: |
2013 |
Journal: |
PLoS One |
Title: |
Tissue-dependent consequences of Apc inactivation on proliferation and differentiation of ciliated cell progenitors via Wnt and notch signaling. |
Volume: |
8 |
Issue: |
4 |
Pages: |
e62215 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kim KH |
Year: |
2015 |
Journal: |
J Clin Invest |
Title: |
CCN1 induces hepatic ductular reaction through integrin αvβ₅-mediated activation of NF-κB. |
Volume: |
125 |
Issue: |
5 |
Pages: |
1886-900 |
|
•
•
•
•
•
|
Publication |
First Author: |
Won JH |
Year: |
2022 |
Journal: |
Nat Commun |
Title: |
CCN1 interacts with integrins to regulate intestinal stem cell proliferation and differentiation. |
Volume: |
13 |
Issue: |
1 |
Pages: |
3117 |
|
•
•
•
•
•
|
Publication |
First Author: |
LoPilato RK |
Year: |
2023 |
Journal: |
Glycobiology |
Title: |
Two NOTCH1 O-fucose sites have opposing functions in mouse retinal angiogenesis. |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Choi J |
Year: |
2021 |
Journal: |
Nat Cell Biol |
Title: |
Release of Notch activity coordinated by IL-1β signalling confers differentiation plasticity of airway progenitors via Fosl2 during alveolar regeneration. |
Volume: |
23 |
Issue: |
9 |
Pages: |
953-966 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gu R |
Year: |
2016 |
Journal: |
Dev Biol |
Title: |
Lineage tracing of Sox2-expressing progenitor cells in the mouse inner ear reveals a broad contribution to non-sensory tissues and insights into the origin of the organ of Corti. |
Volume: |
414 |
Issue: |
1 |
Pages: |
72-84 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tual-Chalot S |
Year: |
2014 |
Journal: |
PLoS One |
Title: |
Endothelial depletion of Acvrl1 in mice leads to arteriovenous malformations associated with reduced endoglin expression. |
Volume: |
9 |
Issue: |
6 |
Pages: |
e98646 |
|
•
•
•
•
•
|
Publication |
First Author: |
Chen L |
Year: |
2017 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Transcriptomes of major renal collecting duct cell types in mouse identified by single-cell RNA-seq. |
Volume: |
114 |
Issue: |
46 |
Pages: |
E9989-E9998 |
|
•
•
•
•
•
|
Publication |
First Author: |
Klose R |
Year: |
2019 |
Journal: |
Sci Rep |
Title: |
Loss of the serine protease HTRA1 impairs smooth muscle cells maturation. |
Volume: |
9 |
Issue: |
1 |
Pages: |
18224 |
|
•
•
•
•
•
|
Publication |
First Author: |
Klose R |
Year: |
2018 |
Journal: |
Oncogene |
Title: |
Inactivation of the serine protease HTRA1 inhibits tumor growth by deregulating angiogenesis. |
Volume: |
37 |
Issue: |
31 |
Pages: |
4260-4272 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sun K |
Year: |
2024 |
Journal: |
Int J Oral Sci |
Title: |
A Wnt10a-Notch signaling axis controls Hertwig's epithelial root sheath cell behaviors during root furcation patterning. |
Volume: |
16 |
Issue: |
1 |
Pages: |
25 |
|
•
•
•
•
•
|
Publication |
First Author: |
Brabletz S |
Year: |
2011 |
Journal: |
EMBO J |
Title: |
The ZEB1/miR-200 feedback loop controls Notch signalling in cancer cells. |
Volume: |
30 |
Issue: |
4 |
Pages: |
770-82 |
|
•
•
•
•
•
|
Publication |
First Author: |
Bae Y |
Year: |
2012 |
Journal: |
Hum Mol Genet |
Title: |
miRNA-34c regulates Notch signaling during bone development. |
Volume: |
21 |
Issue: |
13 |
Pages: |
2991-3000 |
|
•
•
•
•
•
|
Publication |
First Author: |
Meng Q |
Year: |
2014 |
Journal: |
PLoS One |
Title: |
Expression of signaling components in embryonic eyelid epithelium. |
Volume: |
9 |
Issue: |
2 |
Pages: |
e87038 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rong H |
Year: |
2016 |
Journal: |
Immunology |
Title: |
Notch signalling suppresses regulatory T-cell function in murine experimental autoimmune uveitis. |
Volume: |
149 |
Issue: |
4 |
Pages: |
447-459 |
|
•
•
•
•
•
|
Publication |
First Author: |
GarcÃa-León MJ |
Year: |
2018 |
Journal: |
Development |
Title: |
Dynamic regulation of NOTCH1 activation and Notch ligand expression in human thymus development. |
Volume: |
145 |
Issue: |
16 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Newbury LJ |
Year: |
2019 |
Journal: |
Sci Rep |
Title: |
Inhibition of Kirsten-Ras reduces fibrosis and protects against renal dysfunction in a mouse model of chronic folic acid nephropathy. |
Volume: |
9 |
Issue: |
1 |
Pages: |
14010 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yu J |
Year: |
2021 |
Journal: |
Sci Transl Med |
Title: |
Hepatocyte TLR4 triggers inter-hepatocyte Jagged1/Notch signaling to determine NASH-induced fibrosis. |
Volume: |
13 |
Issue: |
599 |
|
|
•
•
•
•
•
|
Publication |
First Author: |
Zagory JA |
Year: |
2017 |
Journal: |
J Surg Res |
Title: |
Notch signaling promotes ductular reactions in biliary atresia. |
Volume: |
215 |
|
Pages: |
250-256 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang D |
Year: |
2022 |
Journal: |
Cell Death Dis |
Title: |
The histone methyltransferase DOT1L is a new epigenetic regulator of pulmonary fibrosis. |
Volume: |
13 |
Issue: |
1 |
Pages: |
60 |
|
•
•
•
•
•
|
Publication |
First Author: |
Shao L |
Year: |
2023 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Hematopoietic Jagged1 is a fetal liver niche factor required for functional maturation and engraftment of fetal hematopoietic stem cells. |
Volume: |
120 |
Issue: |
20 |
Pages: |
e2210058120 |
|
•
•
•
•
•
|
Publication |
First Author: |
Carolina E |
Year: |
2024 |
Journal: |
Nat Commun |
Title: |
Generation of human iPSC-derived 3D bile duct within liver organoid by incorporating human iPSC-derived blood vessel. |
Volume: |
15 |
Issue: |
1 |
Pages: |
7424 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
375
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Foulquier S |
Year: |
2019 |
Journal: |
Angiogenesis |
Title: |
The role of receptor MAS in microglia-driven retinal vascular development. |
Volume: |
22 |
Issue: |
4 |
Pages: |
481-489 |
|
•
•
•
•
•
|
Publication |
First Author: |
Tchekneva EE |
Year: |
2019 |
Journal: |
J Immunother Cancer |
Title: |
Determinant roles of dendritic cell-expressed Notch Delta-like and Jagged ligands on anti-tumor TÂ cell immunity. |
Volume: |
7 |
Issue: |
1 |
Pages: |
95 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sizemore GM |
Year: |
2017 |
Journal: |
Oncogene |
Title: |
Stromal PTEN inhibits the expansion of mammary epithelial stem cells through Jagged-1. |
Volume: |
36 |
Issue: |
16 |
Pages: |
2297-2308 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liu C |
Year: |
2022 |
Journal: |
Theranostics |
Title: |
Endothelial PERK-ATF4-JAG1 axis activated by T-ALL remodels bone marrow vascular niche. |
Volume: |
12 |
Issue: |
6 |
Pages: |
2894-2907 |
|
•
•
•
•
•
|
Publication |
First Author: |
Morell CM |
Year: |
2017 |
Journal: |
PLoS One |
Title: |
Notch signaling and progenitor/ductular reaction in steatohepatitis. |
Volume: |
12 |
Issue: |
11 |
Pages: |
e0187384 |
|
•
•
•
•
•
|
Publication |
First Author: |
Strell C |
Year: |
2019 |
Journal: |
J Natl Cancer Inst |
Title: |
Impact of Epithelial-Stromal Interactions on Peritumoral Fibroblasts in Ductal Carcinoma in Situ. |
Volume: |
111 |
Issue: |
9 |
Pages: |
983-995 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kamalakar A |
Year: |
2021 |
Journal: |
Bone |
Title: |
JAGGED1 stimulates cranial neural crest cell osteoblast commitment pathways and bone regeneration independent of canonical NOTCH signaling. |
Volume: |
143 |
|
Pages: |
115657 |
|
•
•
•
•
•
|
Publication |
First Author: |
Gilels FA |
Year: |
2022 |
Journal: |
Cell Death Dis |
Title: |
Deletion of the Notch ligand Jagged1 during cochlear maturation leads to inner hair cell defects and hearing loss. |
Volume: |
13 |
Issue: |
11 |
Pages: |
971 |
|
•
•
•
•
•
|
Publication |
First Author: |
Robinson SC |
Year: |
2017 |
Journal: |
Cell Commun Signal |
Title: |
Kaiso differentially regulates components of the Notch signaling pathway in intestinal cells. |
Volume: |
15 |
Issue: |
1 |
Pages: |
24 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
368
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
641
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
973
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1006
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1006
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
946
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
The Gene Expression Nervous System Atlas (GENSAT) Project, The Rockefeller University (New York, NY) |
Year: |
2005 |
Journal: |
Database Download |
Title: |
MGI download of GENSAT transgene data |
|
|
|
|
•
•
•
•
•
|