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Search results 2601 to 2680 out of 2680 for Tbr1

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Type Details Score
Publication
- | J:204812
     
First Author: International Mouse Strain Resource
Year: 2014
Journal: Database Download
Title: MGI download of germline transmission data for alleles from IMSR strain data
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Publication
- | J:171409
     
First Author: GUDMAP Consortium
Year: 2004
Journal: www.gudmap.org
Title: GUDMAP: the GenitoUrinary Development Molecular Anatomy Project
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Publication
- | J:157065
     
First Author: Helmholtz Zentrum Muenchen GmbH
Year: 2010
Journal: MGI Direct Data Submission
Title: Alleles produced for the EUCOMM and EUCOMMTools projects by the Helmholtz Zentrum Muenchen GmbH (Hmgu)
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Publication
- | J:155856
       
First Author: The Gene Ontology Consortium
Year: 2014
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-rat orthologs
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Publication
16602821 | J:162220
First Author: Magdaleno S
Year: 2006
Journal: PLoS Biol
Title: BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system.
Volume: 4
Issue: 4
Pages: e86
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Publication
16141072 | J:99680
First Author: Carninci P
Year: 2005
Journal: Science
Title: The transcriptional landscape of the mammalian genome.
Volume: 309
Issue: 5740
Pages: 1559-63
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Publication
- | J:23000
       
First Author: MGD Nomenclature Committee
Year: 1995
Title: Nomenclature Committee Use
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Publication
- | J:238766
     
First Author: Shanghai Model Organisms Center
Year: 2017
Journal: MGI Direct Data Submission
Title: Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China
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Publication
- | J:211773
     
First Author: Mouse Genome Informatics and the International Mouse Phenotyping Consortium (IMPC)
Year: 2014
Journal: Database Release
Title: Obtaining and Loading Phenotype Annotations from the International Mouse Phenotyping Consortium (IMPC) Database
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Publication
- | J:326541
       
First Author: Cyagen Biosciences Inc.
Year: 2022
Title: Cyagen Biosciences Website.
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Publication
- | J:342605
       
First Author: GOA curators
Year: 2016
Title: Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara
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Publication
- | J:342587
       
First Author: AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators
Year: 2011
Title: Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity
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Publication
- | J:342609
       
First Author: UniProt
Year: 2021
Title: Electronic Gene Ontology annotations created by ARBA machine learning models
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Publication
12466851 | J:80000
First Author: Okazaki Y
Year: 2002
Journal: Nature
Title: Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.
Volume: 420
Issue: 6915
Pages: 563-73
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Publication
- | J:293217
       
First Author: GemPharmatech
Year: 2020
Title: GemPharmatech Website.
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Publication
- | J:164563
       
First Author: The Gene Ontology Consortium
Year: 2010
Title: Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs
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Publication
- | J:72247
       
First Author: DDB, FB, MGI, GOA, ZFIN curators
Year: 2001
Title: Gene Ontology annotation through association of InterPro records with GO terms
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Publication
- | J:157972
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2010
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2).
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Publication
- | J:342604
       
First Author: UniProt-GOA
Year: 2012
Title: Gene Ontology annotation based on UniProtKB/Swiss-Prot Subcellular Location vocabulary mapping, accompanied by conservative changes to GO terms applied by UniProt
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Publication
- | J:161428
       
First Author: Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas
Year: 2010
Title: Annotation inferences using phylogenetic trees
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Publication
- | J:155721
     
First Author: Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI)
Year: 2010
Journal: Database Download
Title: Consensus CDS project
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Publication
- | J:262123
     
First Author: Allen Institute for Brain Science
Year: 2004
Journal: Allen Institute
Title: Allen Brain Atlas: mouse riboprobes
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Publication
- | J:63103
     
First Author: Mouse Genome Database and National Center for Biotechnology Information
Year: 2000
Journal: Database Release
Title: Entrez Gene Load
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Publication
- | J:91388
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations
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Publication
- | J:389486
     
First Author: Mouse Genome Informatics and Ensembl Genome Database Project
Year: 2026
Journal: Database Release
Title: MGI Strain Genome Feature and Gene Model Load from Ensembl.
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Publication
- | J:90438
       
First Author: Mouse Genome Informatics Scientific Curators
Year: 2005
Title: Obtaining and loading genome assembly coordinates from NCBI annotations
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Publication
- | J:53168
     
First Author: Bairoch A
Year: 1999
Journal: Database Release
Title: SWISS-PROT Annotated protein sequence database
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Publication
- | J:144086
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform
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Publication
- | J:144087
     
First Author: Mouse Genome Informatics Scientific Curators
Year: 2009
Journal: Database Download
Title: Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform
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Publication
- | J:155221
     
First Author: Mouse Genome Informatics
Year: 2010
Journal: Database Release
Title: Protein Ontology Association Load.
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Publication
- | J:85324
     
First Author: Mouse Genome Informatics Group
Year: 2003
Journal: Database Procedure
Title: Automatic Encodes (AutoE) Reference
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HT Experiment
GSE82069 | MicroRNA-independent functions of DGCR8 are critically required for neocortical development and TBR1 expression
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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GXD Expression
GXD Expression
Probe: MGI:4882095
Assay Type: In situ reporter (knock in)
Annotation Date: 2026-10-14
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3271122
Pattern: Regionally restricted
Stage: TS22
Assay Id: MGI:8460766
Age: embryonic day 14.5
Image: 1J,O
Note: Expression partially overlapping with Tbr1 domain.
Specimen Label: 1J,O
Detected: true
Specimen Num: 7
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GXD Expression
GXD Expression
Probe: MGI:7341461
Assay Type: Immunohistochemistry
Annotation Date: 2022-09-28
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3527222
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:7341499
Age: embryonic day 14.5
Image: 1E
Note: Coexpressed with Tbr1 in the transitory zone.
Specimen Label: 1E
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
 
Probe: MGI:5447971
Assay Type: Immunohistochemistry
Annotation Date: 2024-02-21
Strength: Weak
Sex: Not Specified
Emaps: EMAPS:3526027
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:7595954
Age: postnatal day 2
Note: Low expressing cells co-localize with Tbr1 in layer VI.
Specimen Label: 4B Ctrl
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
Probe: MGI:5448062
Assay Type: RNA in situ
Annotation Date: 2013-01-08
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1903727
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:5448185
Age: postnatal day 0
Image: 4B
Note: Colocalization with Tbr1 in the majority of cells.
Specimen Label: 4B
Detected: true
Specimen Num: 23
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GXD Expression
GXD Expression
Probe: MGI:5448062
Assay Type: RNA in situ
Annotation Date: 2013-01-08
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3277227
Pattern: Not Specified
Stage: TS27
Assay Id: MGI:5448185
Age: postnatal day 0
Image: 4B
Note: Colocalization with Tbr1 in the majority of cells.
Specimen Label: 4B
Detected: true
Specimen Num: 23
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GXD Expression
GXD Expression
Probe: MGI:5448062
Assay Type: RNA in situ
Annotation Date: 2013-01-08
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3561128
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:5448185
Age: postnatal day 21
Image: 5D
Note: Coexpression with Tbr1 was seen in a subset of cells.
Specimen Label: 5D
Detected: true
Specimen Num: 27
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HT Experiment
E-MTAB-1487 | Transcription profiling by array of mice overexpressing a transgenic mutant human TDP-43 (hTDP-43) gene and wild-type mice to study TDP-43 mutations in relation to amyotrophic lateral sclerosis
 
Experiment Type: transcription profiling by array
Study Type: Baseline
Source: ArrayExpress
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GXD Expression
GXD Expression
Probe: MGI:5447971
Assay Type: Immunohistochemistry
Annotation Date: 2026-08-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1754424
Pattern: Regionally restricted
Stage: TS24
Assay Id: MGI:8400449
Age: embryonic day 16.5
Image: 4B stop/+
Note: Proportion of expressing cells vo-expressing Tbr1 in layer V significantly higher compared to wild type.
Specimen Label: 4B stop/+
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
Probe: MGI:5447971
Assay Type: Immunohistochemistry
Annotation Date: 2026-08-11
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1754424
Pattern: Regionally restricted
Stage: TS24
Assay Id: MGI:8400449
Age: embryonic day 16.5
Image: 4B stop/stop
Note: Proportion of expressing cells vo-expressing Tbr1 in layer V significantly higher compared to wild type.
Specimen Label: 4B stop/stop
Detected: true
Specimen Num: 5
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GXD Expression
GXD Expression
Probe: MGI:5448062
Assay Type: RNA in situ
Annotation Date: 2013-01-08
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3560828
Pattern: Not Specified
Stage: TS28
Assay Id: MGI:5448185
Age: postnatal day 21
Image: 5D
Note: Expressed in the periglomerular cells. Coexpression with Tbr1 was seen in a subset of cells.
Specimen Label: 5D
Detected: true
Specimen Num: 27
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GXD Expression
GXD Expression
 
Probe: MGI:5751834
Assay Type: Immunohistochemistry
Annotation Date: 2016-03-14
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1754422
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:5751978
Age: embryonic day 14.5
Note: Generally, expression was distinct from Tbr1 expression. Rare cells were seen that were labeled with both antibodies.
Specimen Label: S1B/C
Detected: true
Specimen Num: 3
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GXD Expression
GXD Expression
 
Probe: MGI:5751834
Assay Type: Immunohistochemistry
Annotation Date: 2016-03-14
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1754422
Pattern: Not Specified
Stage: TS22
Assay Id: MGI:5751978
Age: embryonic day 14.5
Note: Generally, expression was distinct from Tbr1 expression. Rare cells were seen that were labeled with both antibodies.
Specimen Label: S1E/F
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
Probe: MGI:7511645
Assay Type: RNA in situ
Annotation Date: 2023-07-26
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689620
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:7511701
Age: embryonic day 12.5
Image: S3A -/-
Note: Expressed in the thalamic eminence. Only modestly increased in the mutant thalamic eminence compared with that of Tbr1 or Mab21l2.
Specimen Label: S3A -/-
Detected: true
Specimen Num: 4
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GXD Expression
GXD Expression
Probe: MGI:7511647
Assay Type: RNA in situ
Annotation Date: 2023-07-26
Strength: Present
Sex: Not Specified
Emaps: EMAPS:1689620
Pattern: Regionally restricted
Stage: TS20
Assay Id: MGI:7511703
Age: embryonic day 12.5
Image: S3B -/-
Note: Expressed in the thalamic eminence. Only modestly increased in the mutant thalamic eminence compared with that of Tbr1 or Mab21l2.
Specimen Label: S3B -/-
Detected: true
Specimen Num: 6
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Allele
Tbr1<tm1.1(cre/ERT2)Maoc> | MGI:6781269
Name: T-box brain transcription factor 1; targeted mutation 1.1, Chai-An Mao
Allele Type: Targeted
Attribute String: Inducible, Null/knockout, Recombinase, Reporter
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GXD Expression
GXD Expression
Probe: MGI:6359380
Assay Type: RNA in situ
Annotation Date: 2025-11-18
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:3524228
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:8262345
Age: postnatal day 7
Image: 1C Dmrt2 left, 1c'
Note: Expression overlaps with Tbr1 expression in anterior cingulate cortex. Strong expression in layer VI cells across rostrocaudal length of cingulate cortex.
Specimen Label: 1C Dmrt2 left, 1c'
Detected: true
Specimen Num: 1
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GXD Expression
GXD Expression
Probe: MGI:6359380
Assay Type: RNA in situ
Annotation Date: 2025-11-18
Strength: Strong
Sex: Not Specified
Emaps: EMAPS:3524228
Pattern: Regionally restricted
Stage: TS28
Assay Id: MGI:8262345
Age: postnatal day 7
Image: 1D Dmrt2 left, 1d'
Note: Expression overlaps with Tbr1 expression in anterior cingulate cortex. Strong expression in layer VI cells across rostrocaudal length of cingulate cortex.
Specimen Label: 1D Dmrt2 left, 1d'
Detected: true
Specimen Num: 2
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GXD Expression
GXD Expression
Probe: MGI:6194277
Assay Type: Immunohistochemistry
Annotation Date: 2018-08-13
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3527224
Pattern: Regionally restricted
Stage: TS24
Assay Id: MGI:6194291
Age: embryonic day 16.5
Image: 1J/K
Note: Expression was detected in the interposed and lateral deep cerebellar nuclei. There was no overlap of staining with Tbr1 in the medial deep nuclei.
Specimen Label: 1J/K
Detected: true
Specimen Num: 7
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GXD Expression
GXD Expression
 
Probe: MGI:5638231
Assay Type: Immunohistochemistry
Annotation Date: 2020-07-15
Strength: Present
Sex: Not Specified
Emaps: EMAPS:3814223
Pattern: Regionally restricted
Stage: TS23
Assay Id: MGI:6441739
Age: embryonic day 15.0
Note: Co-expression with Tbr1 in Cajal-Retzius neurons originating in the cortical hem, which do not migrate dorsally and do not assemble in the aborted hippocampal fissure.
Specimen Label: 7B
Detected: true
Specimen Num: 1
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Allele
Tbr1<tm1.1Csbd> | MGI:6388548
Name: T-box brain transcription factor 1; targeted mutation 1.1, Eunjoon Kim
Allele Type: Targeted
Attribute String: Humanized sequence
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Allele
Tbr1<tm1(cre/ERT2)Zjh> | MGI:6720839
Name: T-box brain transcription factor 1; targeted mutation 1, Z Josh Huang
Allele Type: Targeted
Attribute String: Inducible, Recombinase
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Allele
Tbr1<tm2.1(Myc)Maoc> | MGI:6781271
Name: T-box brain transcription factor 1; targeted mutation 2.1, Chai-An Mao
Allele Type: Targeted
Attribute String: Conditional ready, Inserted expressed sequence
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Allele
Tg(tetO-Tbr1,-EGFP)#Maoc | MGI:6781273
Name: transgene insertion, Chai-An Mao
Allele Type: Transgenic
Attribute String: Inducible, Inserted expressed sequence
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Allele
Tbr1<em3Boro> | MGI:7521957
 
Name: T-box brain transcription factor 1; endonuclease-mediated mutation 3, Brian Oroak
Allele Type: Endonuclease-mediated
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Genotype
Genotype
Symbol: Tbr1/Tbr1
Background: Not Specified
Zygosity: hm
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Tbr1/Tbr1<+>
Background: Not Specified
Zygosity: ht
Has Mutant Allele: true
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HT Experiment
GSE115703 | The Epigenetic Factor Landscape of Developing Neocortex is Regulated by Transcription Factors Pax6 ->Tbr2 ->Tbr1
 
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: GEO
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Strain
MGI:6720853 | STOCK Tbr1<tm1(cre/ERT2)Zjh>/J
Attribute String: mutant stock, targeted mutation
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Allele
Tbr1<em1Boro> | MGI:7521939
Name: T-box brain transcription factor 1; endonuclease-mediated mutation 1, Brian Oroak
Allele Type: Endonuclease-mediated
Attribute String: Humanized sequence, Null/knockout
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Genotype
Genotype
Symbol: Tbr1/Tbr1
Background: involves: C57BL/6J
Zygosity: hm
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Tbr1/Tbr1<+>
Background: involves: C57BL/6J
Zygosity: ht
Has Mutant Allele: true
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Strain
MGI:7521942 | C57BL/6-Tbr1<em1Boro>/J
Attribute String: coisogenic, endonuclease-mediated mutation, mutant strain
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Genotype
Genotype
Symbol: Atoh7/Atoh7 Tbr1/Tbr1<+>
Background: Not Specified
Zygosity: cx
Has Mutant Allele: true
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HT Experiment
E-GEOD-43387 | The protomap is propagated to cortical plate neurons through an Eomes-dependent intermediate map
Series Id: GSE43387
Experiment Type: transcription profiling by array
Study Type: WT vs. Mutant
Source: ArrayExpress
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Genotype
Genotype
Symbol: Tbr1/Tbr1 Tg(Six3-cre)69Frty/?
Background: involves: C57BL/6 * DBA/2
Zygosity: cn
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Tbr1/Tbr1 Tg(Six3-cre)69Frty/?
Background: involves: C57BL/6 * DBA/2
Zygosity: cn
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Tbr1/Tbr1<+>
Background: involves: 129S6/SvEvTac * C57BL/6NCrl
Zygosity: cn
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Pou4f1/Pou4f1<+> Tbr1/Tbr1<+>
Background: involves: 129
Zygosity: cn
Has Mutant Allele: true
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HT Experiment
GSE134526 | Whole brain transcriptomic analysis of Tbr1-K228E mutant mice
 
Experiment Type: RNA-Seq
Study Type: WT vs. Mutant
Source: GEO
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Publication
38850535 | J:375937
First Author: Fazel Darbandi S
Year: 2024
Journal: Cell Rep
Title: Five autism-associated transcriptional regulators target shared loci proximal to brain-expressed genes.
Volume: 43
Issue: 6
Pages: 114329
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Genotype
Genotype
Symbol: Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Pou4f1/Pou4f1<+> Tbr1/Tbr1<+>
Background: involves: 129S6/SvEvTac * C57BL/6NCrl
Zygosity: cn
Has Mutant Allele: true
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Genotype
Genotype
Symbol: Gt(ROSA)26Sor/Gt(ROSA)26Sor<+> Tbr1/Tbr1<+>
Background: involves: 129
Zygosity: cn
Has Mutant Allele: true
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Publication
27915032 | J:255363
First Author: Carvajal AE
Year: 2017
Journal: Biochim Biophys Acta Mol Basis Dis
Title: Reelin expression is up-regulated in mice colon in response to acute colitis and provides resistance against colitis.
Volume: 1863
Issue: 2
Pages: 462-473
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Publication
37219072 | J:340870
   
First Author: Yamagata T
Year: 2023
Journal: Elife
Title: Scn1a-GFP transgenic mouse revealed Nav1.1 expression in neocortical pyramidal tract projection neurons.
Volume: 12
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Publication
21068336 | J:166448
First Author: Carcea I
Year: 2010
Journal: J Neurosci
Title: Flotillin-mediated endocytic events dictate cell type-specific responses to semaphorin 3A.
Volume: 30
Issue: 45
Pages: 15317-29
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Publication
38583418 | J:370709
First Author: Wang L
Year: 2025
Journal: Dev Neurosci
Title: Transcription Factor EB Overexpression through Glial Fibrillary Acidic Protein Promoter Disrupts Neuronal Lamination by Dysregulating Neurogenesis during Embryonic Development.
Volume: 47
Issue: 1
Pages: 40-54
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Publication
36133924 | J:328988
 
First Author: Talbot CD
Year: 2022
Journal: Front Cell Dev Biol
Title: Eomes function is conserved between zebrafish and mouse and controls left-right organiser progenitor gene expression via interlocking feedforward loops.
Volume: 10
Pages: 982477
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Publication
40248263 | J:364874
 
First Author: Wang T
Year: 2025
Journal: Front Neurosci
Title: Comparative study of the effects of prenatal sevoflurane exposure at different cortical stages on forebrain development and maturation in offspring.
Volume: 19
Pages: 1556703
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MouseMine is a collaboration between MGI at The Jackson Laboratory and the InterMine project at the Cambridge Systems Biology Centre. MouseMine is funded through a grant from the NIH/NHGRI.The Jackson Laboratory makes no representation about the suitability or accuracy of this software or data for any purpose, and makes no warranties, either express or implied, including merchantability and fitness for a particular purpose or that the use of this software or data will not infringe any third party patents, copyrights, trademarks, or other rights. the software and data are provided "as is". This software and data are provided to enhance knowledge and encourage progress in the scientific community and are to be used only for research and educational purposes. Any reproduction or use for commercial purpose is prohibited without the prior express written permission of the Jackson Laboratory.

Copyright © 2017 by The Jackson Laboratory. All Rights Reserved

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