| Type |
Details |
Score |
| Publication |
| First Author: |
Kim HT |
| Year: |
2018 |
| Journal: |
Nat Commun |
| Title: |
Myh10 deficiency leads to defective extracellular matrix remodeling and pulmonary disease. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
4600 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wei G |
| Year: |
2020 |
| Journal: |
Development |
| Title: |
Erk and MAPK signaling is essential for intestinal development through Wnt pathway modulation. |
| Volume: |
147 |
| Issue: |
17 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yang J |
| Year: |
2024 |
| Journal: |
J Clin Invest |
| Title: |
A BMP-controlled metabolic/epigenetic signaling cascade directs midfacial morphogenesis. |
| Volume: |
134 |
| Issue: |
8 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Su-Feher L |
| Year: |
2022 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Single cell enhancer activity distinguishes GABAergic and cholinergic lineages in embryonic mouse basal ganglia. |
| Volume: |
119 |
| Issue: |
15 |
| Pages: |
e2108760119 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Sullivan SL |
| Year: |
1996 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
The chromosomal distribution of mouse odorant receptor genes. |
| Volume: |
93 |
| Issue: |
2 |
| Pages: |
884-8 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tanahashi H |
| Year: |
2018 |
| Journal: |
Biochem Biophys Res Commun |
| Title: |
Deletion of Lrp4 increases the incidence of microphthalmia. |
| Volume: |
506 |
| Issue: |
3 |
| Pages: |
478-484 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Naillat F |
| Year: |
2024 |
| Journal: |
Biochim Biophys Acta Mol Basis Dis |
| Title: |
Calcium signaling induces partial EMT and renal fibrosis in a Wnt4(mCherry) knock-in mouse model. |
| Volume: |
1870 |
| Issue: |
5 |
| Pages: |
167180 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Daniel E |
| Year: |
2020 |
| Journal: |
Development |
| Title: |
Cyp26b1 is an essential regulator of distal airway epithelial differentiation during lung development. |
| Volume: |
147 |
| Issue: |
4 |
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Jones MR |
| Year: |
2018 |
| Journal: |
Front Genet |
| Title: |
A Comprehensive Analysis of Fibroblast Growth Factor Receptor 2b Signaling on Epithelial Tip Progenitor Cells During Early Mouse Lung Branching Morphogenesis. |
| Volume: |
9 |
|
| Pages: |
746 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Ayrault O |
| Year: |
2010 |
| Journal: |
Cancer Res |
| Title: |
Atoh1 inhibits neuronal differentiation and collaborates with Gli1 to generate medulloblastoma-initiating cells. |
| Volume: |
70 |
| Issue: |
13 |
| Pages: |
5618-27 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Long JE |
| Year: |
2009 |
| Journal: |
J Comp Neurol |
| Title: |
Dlx1&2 and Mash1 transcription factors control striatal patterning and differentiation through parallel and overlapping pathways. |
| Volume: |
512 |
| Issue: |
4 |
| Pages: |
556-72 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Long JE |
| Year: |
2009 |
| Journal: |
Cereb Cortex |
| Title: |
Dlx1&2 and Mash1 transcription factors control MGE and CGE patterning and differentiation through parallel and overlapping pathways. |
| Volume: |
19 Suppl 1 |
|
| Pages: |
i96-106 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gurdziel K |
| Year: |
2016 |
| Journal: |
Dev Dyn |
| Title: |
Transcriptome of the inner circular smooth muscle of the developing mouse intestine: Evidence for regulation of visceral smooth muscle genes by the hedgehog target gene, cJun. |
| Volume: |
245 |
| Issue: |
5 |
| Pages: |
614-26 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Pyczek J |
| Year: |
2019 |
| Journal: |
Front Genet |
| Title: |
Regulation and Role of GLI1 in Cutaneous Squamous Cell Carcinoma Pathogenesis. |
| Volume: |
10 |
|
| Pages: |
1185 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lewandowski JP |
| Year: |
2015 |
| Journal: |
Dev Biol |
| Title: |
Spatiotemporal regulation of GLI target genes in the mammalian limb bud. |
| Volume: |
406 |
| Issue: |
1 |
| Pages: |
92-103 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Shimizu H |
| Year: |
2013 |
| Journal: |
PLoS One |
| Title: |
The AERO system: a 3D-like approach for recording gene expression patterns in the whole mouse embryo. |
| Volume: |
8 |
| Issue: |
10 |
| Pages: |
e75754 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Tang F |
| Year: |
2011 |
| Journal: |
PLoS One |
| Title: |
Deterministic and stochastic allele specific gene expression in single mouse blastomeres. |
| Volume: |
6 |
| Issue: |
6 |
| Pages: |
e21208 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
International Committee on Standardized Genetic Nomenclature for Mice |
| Year: |
1993 |
|
| Title: |
Nomenclature rule change to delete hyphens and parentheses from mouse locus symbols |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Birgit Meldal and Sandra Orchard (1). (1) European Bioinformatics Institute (EBI), Hinxton, Cambridgeshire, United Kingdom |
| Year: |
2023 |
|
| Title: |
Manual transfer of experimentally-verified manual GO annotation data to homologous complexes by curator judgment of sequence, composition and function similarity |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wiese CB |
| Year: |
2012 |
| Journal: |
Front Neurosci |
| Title: |
A genome-wide screen to identify transcription factors expressed in pelvic Ganglia of the lower urinary tract. |
| Volume: |
6 |
|
| Pages: |
130 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Yokoyama S |
| Year: |
2009 |
| Journal: |
Dev Cell |
| Title: |
A systems approach reveals that the myogenesis genome network is regulated by the transcriptional repressor RP58. |
| Volume: |
17 |
| Issue: |
6 |
| Pages: |
836-48 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2001 |
|
| Title: |
Gene Ontology Annotation by the MGI Curatorial Staff |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Shanghai Model Organisms Center |
| Year: |
2017 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Information obtained from the Shanghai Model Organisms Center (SMOC), Shanghai, China |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Gray PA |
| Year: |
2004 |
| Journal: |
Science |
| Title: |
Mouse brain organization revealed through direct genome-scale TF expression analysis. |
| Volume: |
306 |
| Issue: |
5705 |
| Pages: |
2255-7 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Thompson CL |
| Year: |
2014 |
| Journal: |
Neuron |
| Title: |
A high-resolution spatiotemporal atlas of gene expression of the developing mouse brain. |
| Volume: |
83 |
| Issue: |
2 |
| Pages: |
309-323 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bedogni F |
| Year: |
2021 |
| Journal: |
Front Mol Neurosci |
| Title: |
Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. |
| Volume: |
14 |
|
| Pages: |
686034 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Velocigene |
| Year: |
2008 |
| Journal: |
MGI Direct Data Submission |
| Title: |
Alleles produced for the KOMP project by Velocigene (Regeneron Pharmaceuticals) |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
GUDMAP Consortium |
| Year: |
2004 |
| Journal: |
www.gudmap.org |
| Title: |
GUDMAP: the GenitoUrinary Development Molecular Anatomy Project |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Hansen GM |
| Year: |
2008 |
| Journal: |
Genome Res |
| Title: |
Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. |
| Volume: |
18 |
| Issue: |
10 |
| Pages: |
1670-9 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Magdaleno S |
| Year: |
2006 |
| Journal: |
PLoS Biol |
| Title: |
BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. |
| Volume: |
4 |
| Issue: |
4 |
| Pages: |
e86 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Zambrowicz BP |
| Year: |
2003 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Wnk1 kinase deficiency lowers blood pressure in mice: a gene-trap screen to identify potential targets for therapeutic intervention. |
| Volume: |
100 |
| Issue: |
24 |
| Pages: |
14109-14 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Cyagen Biosciences Inc. |
| Year: |
2022 |
|
| Title: |
Cyagen Biosciences Website. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
| Year: |
2011 |
|
| Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
UniProt-GOA |
| Year: |
2012 |
|
| Title: |
Gene Ontology annotation based on UniProtKB/Swiss-Prot keyword mapping |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
GOA curators |
| Year: |
2016 |
|
| Title: |
Automatic transfer of experimentally verified manual GO annotation data to orthologs using Ensembl Compara |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Carninci P |
| Year: |
2005 |
| Journal: |
Science |
| Title: |
The transcriptional landscape of the mammalian genome. |
| Volume: |
309 |
| Issue: |
5740 |
| Pages: |
1559-63 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
MGD Nomenclature Committee |
| Year: |
1995 |
|
| Title: |
Nomenclature Committee Use |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
GemPharmatech |
| Year: |
2020 |
|
| Title: |
GemPharmatech Website. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and National Center for Biotechnology Information (NCBI) |
| Year: |
2008 |
| Journal: |
Database Download |
| Title: |
Mouse Gene Trap Data Load from dbGSS |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
| Year: |
2004 |
| Journal: |
Database Release |
| Title: |
Mouse T31 Radiation Hybrid Data Load |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
The Gene Ontology Consortium |
| Year: |
2010 |
|
| Title: |
Automated transfer of experimentally-verified manual GO annotation data to mouse-human orthologs |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Diez-Roux G |
| Year: |
2011 |
| Journal: |
PLoS Biol |
| Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
| Volume: |
9 |
| Issue: |
1 |
| Pages: |
e1000582 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2002 |
|
| Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
| Year: |
2010 |
|
| Title: |
Annotation inferences using phylogenetic trees |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Allen Institute for Brain Science |
| Year: |
2004 |
| Journal: |
Allen Institute |
| Title: |
Allen Brain Atlas: mouse riboprobes |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics |
| Year: |
2010 |
| Journal: |
Database Release |
| Title: |
Protein Ontology Association Load. |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
| Year: |
2000 |
| Journal: |
Database Release |
| Title: |
Entrez Gene Load |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2009 |
| Journal: |
Database Download |
| Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
| Year: |
2010 |
| Journal: |
Database Download |
| Title: |
Consensus CDS project |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Group |
| Year: |
2003 |
| Journal: |
Database Procedure |
| Title: |
Automatic Encodes (AutoE) Reference |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Bairoch A |
| Year: |
1999 |
| Journal: |
Database Release |
| Title: |
SWISS-PROT Annotated protein sequence database |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mouse Genome Informatics Scientific Curators |
| Year: |
2005 |
|
| Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
|
|
|
|
•
•
•
•
•
|
| Publication |
| First Author: |
Li X |
| Year: |
2006 |
| Journal: |
Oncogene |
| Title: |
Snail induction is an early response to Gli1 that determines the efficiency of epithelial transformation. |
| Volume: |
25 |
| Issue: |
4 |
| Pages: |
609-21 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Di Marcotullio L |
| Year: |
2011 |
| Journal: |
Oncogene |
| Title: |
Numb activates the E3 ligase Itch to control Gli1 function through a novel degradation signal. |
| Volume: |
30 |
| Issue: |
1 |
| Pages: |
65-76 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Deng W |
| Year: |
2015 |
| Journal: |
J Cell Sci |
| Title: |
SOX9 inhibits β-TrCP-mediated protein degradation to promote nuclear GLI1 expression and cancer stem cell properties. |
| Volume: |
128 |
| Issue: |
6 |
| Pages: |
1123-38 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Viswakarma N |
| Year: |
2021 |
| Journal: |
Cancer Lett |
| Title: |
Mixed Lineage Kinase 3 phosphorylates prolyl-isomerase PIN1 and potentiates GLI1 signaling in pancreatic cancer development. |
| Volume: |
515 |
|
| Pages: |
1-13 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Rahman MM |
| Year: |
2018 |
| Journal: |
Cancer Res |
| Title: |
A Novel Mechanism for Activation of GLI1 by Nuclear SMO That Escapes Anti-SMO Inhibitors. |
| Volume: |
78 |
| Issue: |
10 |
| Pages: |
2577-2588 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Falkenberg KJ |
| Year: |
2016 |
| Journal: |
Cell Death Differ |
| Title: |
A genome scale RNAi screen identifies GLI1 as a novel gene regulating vorinostat sensitivity. |
| Volume: |
23 |
| Issue: |
7 |
| Pages: |
1209-18 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Dennler S |
| Year: |
2007 |
| Journal: |
Cancer Res |
| Title: |
Induction of sonic hedgehog mediators by transforming growth factor-beta: Smad3-dependent activation of Gli2 and Gli1 expression in vitro and in vivo. |
| Volume: |
67 |
| Issue: |
14 |
| Pages: |
6981-6 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Brennan-Crispi DM |
| Year: |
2019 |
| Journal: |
J Invest Dermatol |
| Title: |
Overexpression of Desmoglein 2 in a Mouse Model of Gorlin Syndrome Enhances Spontaneous Basal Cell Carcinoma Formation through STAT3-Mediated Gli1 Expression. |
| Volume: |
139 |
| Issue: |
2 |
| Pages: |
300-307 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Palaniswamy R |
| Year: |
2010 |
| Journal: |
BMC Mol Biol |
| Title: |
Genetic variations regulate alternative splicing in the 5' untranslated regions of the mouse glioma-associated oncogene 1, Gli1. |
| Volume: |
11 |
|
| Pages: |
32 |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
Negative regulation of Gli1 and Gli2 activator function by Suppressor of fused through multiple mechanisms. |
|
•
•
•
•
•
|
| Interaction Experiment |
| Description: |
MEP50/PRMT5-mediated methylation activates GLI1 in Hedgehog signalling through inhibition of ubiquitination by the ITCH/NUMB complex. |
|
•
•
•
•
•
|
| Pathway |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:23359 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2012-11-09 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1689519 |
| Pattern: |
Regionally restricted |
| Stage: |
TS19 |
| Assay Id: |
MGI:5441098 |
| Age: |
embryonic day 11.5 |
| Image: |
4G |
| Note: |
Expression flanked the midline and extended to abut the hypothalamic border of Gli1 expression. |
| Specimen Label: |
4G |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:6382995 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2020-01-02 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1716823 |
| Pattern: |
Widespread |
| Stage: |
TS23 |
| Assay Id: |
MGI:6383014 |
| Age: |
embryonic day 15.5 |
| Image: |
2G |
| Note: |
Authors report expression comparable to that of Gli1 and Ptch1 in wild type retina. |
| Specimen Label: |
2G |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7664629 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-07-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1859223 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:7664634 |
| Age: |
embryonic day 15.5 |
| Image: |
2BB |
| Note: |
Expression overlapping with that of Gli1 in neuroblast layer of neural retina |
| Specimen Label: |
2BB |
| Detected: |
true |
| Specimen Num: |
8 |
|
•
•
•
•
•
|
| Allele |
| Name: |
GLI-Kruppel family member GLI1; targeted mutation 4, Alexandra L Joyner |
| Allele Type: |
Targeted |
| Attribute String: |
Null/knockout, Reporter |
|
•
•
•
•
•
|
| Allele |
| Name: |
GLI-Kruppel family member GLI1; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
| Allele Type: |
Endonuclease-mediated |
| Attribute String: |
Inducible, Recombinase |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Abe Y |
| Year: |
2019 |
| Journal: |
Commun Biol |
| Title: |
MEP50/PRMT5-mediated methylation activates GLI1 in Hedgehog signalling through inhibition of ubiquitination by the ITCH/NUMB complex. |
| Volume: |
2 |
|
| Pages: |
23 |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
•
•
•
•
•
|
| Allele |
| Name: |
GLI-Kruppel family member GLI1; targeted mutation 1, James L Salzer |
| Allele Type: |
Targeted |
| Attribute String: |
Conditional ready |
|
•
•
•
•
•
|
| Allele |
| Name: |
GLI-Kruppel family member GLI1; targeted mutation 4.1, Alexandra L Joyner |
| Allele Type: |
Targeted |
| Attribute String: |
Null/knockout, Reporter |
|
•
•
•
•
•
|
| DO Term |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lakiza O |
| Year: |
2005 |
| Journal: |
Dev Biol |
| Title: |
STAR proteins quaking-6 and GLD-1 regulate translation of the homologues GLI1 and tra-1 through a conserved RNA 3'UTR-based mechanism. |
| Volume: |
287 |
| Issue: |
1 |
| Pages: |
98-110 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:5774791 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2016-06-02 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1614015 |
| Pattern: |
Regionally restricted |
| Stage: |
TS15 |
| Assay Id: |
MGI:5774798 |
| Age: |
embryonic day 9.5 |
| Image: |
1B |
| Note: |
Expression expands laterally from the medial. There was some overlap between Shh and Gli1 expression at their domain boundaries (low expression). |
| Specimen Label: |
1B |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
484
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
mutant stock, targeted mutation |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Allele |
| Name: |
transgene insertion DM197, GENSAT Project at Rockefeller University |
| Allele Type: |
Transgenic |
| Attribute String: |
Reporter |
|
•
•
•
•
•
|
| Protein Coding Gene |
| Type: |
protein_coding_gene |
| Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
| Protein |
| Organism: |
Mus musculus/domesticus |
| Length: |
653
 |
| Fragment?: |
false |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
Baseline |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
WT vs. Mutant |
| Source: |
GEO |
|
•
•
•
•
•
|
| HT Experiment |
|
| Experiment Type: |
RNA-Seq |
| Study Type: |
Baseline |
| Source: |
GEO |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7664631 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-07-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1792323 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:7664636 |
| Age: |
embryonic day 15.5 |
| Image: |
2KK |
| Note: |
Expression restricted narrow band of mesenchyme surrounding molars at outer edge of Ptch1 and Gli1 expression, at a distance from Shh-expressing cells. Strong expression in narrow band of peripheral mesenchyme, including dental follicle, encompassing developing molars. Faint expression detected throughout remaining mesenchymal components. |
| Specimen Label: |
2KK |
| Detected: |
true |
| Specimen Num: |
3 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7664631 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-07-15 |
| Strength: |
Strong |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1736423 |
| Pattern: |
Graded |
| Stage: |
TS23 |
| Assay Id: |
MGI:7664636 |
| Age: |
embryonic day 15.5 |
| Image: |
2MM |
| Note: |
Graded and robust pattern of expression, strongest in palatal mesenchyme adjacent to Shh-expressing rugae. Strong expression in palatal mesenchyme adjacent to palatal oral epithelium of palatal rugae in large region overlapping with and extending behond that of Gli1 and Ptch1 expression. Mesenchymal expression is graded, with strongest expression closest to oral epithelium. |
| Specimen Label: |
2MM |
| Detected: |
true |
| Specimen Num: |
5 |
|
•
•
•
•
•
|
| GXD Expression |
| Probe: |
MGI:7664631 |
| Assay Type: |
RNA in situ |
| Annotation Date: |
2024-07-15 |
| Strength: |
Present |
| Sex: |
Not Specified |
| Emaps: |
EMAPS:1794423 |
| Pattern: |
Regionally restricted |
| Stage: |
TS23 |
| Assay Id: |
MGI:7664636 |
| Age: |
embryonic day 15.5 |
| Image: |
2JJ |
| Note: |
Expression restricted narrow band of mesenchyme surrounding molars at outer edge of Ptch1 and Gli1 expression, at a distance from Shh-expressing cells. Strong expression in narrow band of peripheral mesenchyme, including dental follicle, encompassing developing molars. Faint expression detected throughout remaining mesenchymal components. |
| Specimen Label: |
2JJ |
| Detected: |
true |
| Specimen Num: |
2 |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
mutant stock, transgenic |
|
•
•
•
•
•
|
| Allele |
| Name: |
gene trap ROSA 26, Philippe Soriano; targeted mutation 6, Andrew P McMahon |
| Allele Type: |
Targeted |
| Attribute String: |
Conditional ready, Inserted expressed sequence, Reporter |
|
•
•
•
•
•
|
| Strain |
| Attribute String: |
mutant stock, targeted mutation, transgenic |
|
•
•
•
•
•
|
| Genotype |
| Symbol: |
Gt(ROSA)26Sor/? |
| Background: |
involves: 129 * C57BL/6 * CBA * Swiss Webster |
| Zygosity: |
ot |
| Has Mutant Allele: |
true |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Lee EY |
| Year: |
2010 |
| Journal: |
Proc Natl Acad Sci U S A |
| Title: |
Hedgehog pathway-regulated gene networks in cerebellum development and tumorigenesis. |
| Volume: |
107 |
| Issue: |
21 |
| Pages: |
9736-41 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Mesman S |
| Year: |
2014 |
| Journal: |
PLoS One |
| Title: |
Mesodiencephalic dopaminergic neuronal differentiation does not involve GLI2A-mediated SHH-signaling and is under the direct influence of canonical WNT signaling. |
| Volume: |
9 |
| Issue: |
5 |
| Pages: |
e97926 |
|
•
•
•
•
•
|
| Protein Domain |
| Type: |
Family |
| Description: |
GLI3 is a member of the GLI family of transcription factors, which also includes GLI1 and GLI2. They are central effectors of the Hedgehog (Hh) pathway in vertebrates [, ]. GLI1 is an obligatory activator, whereas GLI2 and GLI3 carry activator and repressor functions []. The full-length GLI3 form, after phosphorylation and nuclear translocation, acts as an activator (GLI3A) while its C-terminally truncated form acts as a repressor (GLI3R). GLI3 participates in the patterning and growth of many organs, including the central nervous system (CNS) and limbs [, , , , ]. |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Wang B |
| Year: |
2000 |
| Journal: |
Cell |
| Title: |
Hedgehog-regulated processing of Gli3 produces an anterior/posterior repressor gradient in the developing vertebrate limb. |
| Volume: |
100 |
| Issue: |
4 |
| Pages: |
423-34 |
|
•
•
•
•
•
|
| Publication |
| First Author: |
Humke EW |
| Year: |
2010 |
| Journal: |
Genes Dev |
| Title: |
The output of Hedgehog signaling is controlled by the dynamic association between Suppressor of Fused and the Gli proteins. |
| Volume: |
24 |
| Issue: |
7 |
| Pages: |
670-82 |
|
•
•
•
•
•
|