Type |
Details |
Score |
Allele |
Name: |
complement C4B (Chido blood group); endonuclease-mediated mutation 1, Bo Peng |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, mutant strain, endonuclease-mediated mutation |
|
•
•
•
•
•
|
Publication |
First Author: |
Hillarp A |
Year: |
1997 |
Journal: |
J Immunol |
Title: |
Molecular cloning of rat C4b binding protein alpha- and beta-chains: structural and functional relationships among human, bovine, rabbit, mouse, and rat proteins. |
Volume: |
158 |
Issue: |
3 |
Pages: |
1315-23 |
|
•
•
•
•
•
|
Publication |
First Author: |
Linse S |
Year: |
1997 |
Journal: |
J Biol Chem |
Title: |
A region of vitamin K-dependent protein S that binds to C4b binding protein (C4BP) identified using bacteriophage peptide display libraries. |
Volume: |
272 |
Issue: |
23 |
Pages: |
14658-65 |
|
•
•
•
•
•
|
Allele |
Name: |
complement C4B (Chido blood group); wild type |
|
|
|
•
•
•
•
•
|
DO Term |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Publication |
First Author: |
Yang Z |
Year: |
1997 |
Journal: |
Genomics |
Title: |
Identification, partial characterization, and genetic mapping of kinesin-like protein genes in mouse. |
Volume: |
45 |
Issue: |
1 |
Pages: |
123-31 |
|
•
•
•
•
•
|
Publication |
First Author: |
Wright MB |
Year: |
1998 |
Journal: |
J Biol Chem |
Title: |
Proliferating and migrating mesangial cells responding to injury express a novel receptor protein-tyrosine phosphatase in experimental mesangial proliferative glomerulonephritis. |
Volume: |
273 |
Issue: |
37 |
Pages: |
23929-37 |
|
•
•
•
•
•
|
Allele |
Name: |
complement C4B (Chido blood group); endonuclease-mediated mutation 1, Harwell |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Allele |
Name: |
complement C4B (Chido blood group); endonuclease-mediated mutation 2, Harwell |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Allele |
Name: |
complement C4B (Chido blood group); targeted mutation 1, Michael C Carroll |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout |
|
•
•
•
•
•
|
Allele |
Name: |
complement C4B (Chido blood group); targeted mutation 1, Mammalian Functional Genomics Centre |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout, Reporter |
|
•
•
•
•
•
|
Strain |
Attribute String: |
mutant strain, coisogenic, endonuclease-mediated mutation |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
Allele |
Name: |
complement C4B (Chido blood group); endonuclease-mediated mutation 1, Michael C Carroll |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Humanized sequence |
|
•
•
•
•
•
|
Allele |
Name: |
complement C4B (Chido blood group); endonuclease-mediated mutation 2, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Conditional ready, No functional change |
|
•
•
•
•
•
|
Genotype |
Symbol: |
C4b/C4b |
Background: |
C57BL/6NTac-C4b/H |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Strain |
Attribute String: |
congenic, mutant strain, targeted mutation |
|
•
•
•
•
•
|
Strain |
Attribute String: |
congenic, mutant strain, spontaneous mutation, targeted mutation |
|
•
•
•
•
•
|
Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
|
•
•
•
•
•
|
Genotype |
Symbol: |
C4b/C4b |
Background: |
involves: 129S4/SvJae * C57BL/6J |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
C4b/C4b |
Background: |
involves: 129S4/SvJae * C57BL/6 |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
C4b/C4b |
Background: |
involves: 129S4/SvJae |
Zygosity: |
hm |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
C4b/C4b Fas/Fas |
Background: |
involves: 129S4/SvJae * C57BL/6 * MRL |
Zygosity: |
cx |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
HT Experiment |
Series Id: |
GSE33372 |
Experiment Type: |
transcription profiling by array |
Study Type: |
WT vs. Mutant |
Source: |
ArrayExpress |
|
•
•
•
•
•
|
Genotype |
Symbol: |
C3/C3 C4b/C4b Fas/Fas |
Background: |
involves: 129S4/SvJae * C57BL/6 * MRL |
Zygosity: |
cx |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Genotype |
Symbol: |
C4b/C4b Cr1l/Cr1l |
Background: |
involves: 129X1/SvJ * C57BL/6 |
Zygosity: |
cx |
Has Mutant Allele: |
true |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
128
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Publication |
First Author: |
Ogata RT |
Year: |
1995 |
Journal: |
J Immunol |
Title: |
Substrate specificities of the protease of mouse serum Ra-reactive factor. |
Volume: |
154 |
Issue: |
5 |
Pages: |
2351-7 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry represents complement component C4-A. C4-A is proteolytically processed to generate subcomponents C4a and C4b by complement component activated C1s (classical pathway) []or mannan-binding lectin-associated serine peptidases (lectin pathway) [, ]. C4a is an anaphylatoxin, whereas C4b forms a complex with complement subcomponent C2a to form the C3/C5 convertase, which is stabilized by Mg2+[, ]. The C3/C5 convertase has trypsin-like specificity []. |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
ncRNA Gene |
Type: |
ncRNA_gene |
Organism: |
Mus caroli |
|
•
•
•
•
•
|
ncRNA Gene |
Type: |
ncRNA_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
ncRNA Gene |
Type: |
ncRNA_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
ncRNA Gene |
Type: |
ncRNA_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
ncRNA Gene |
Type: |
ncRNA_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
ncRNA Gene |
Type: |
ncRNA_gene |
Organism: |
mouse, laboratory |
|
•
•
•
•
•
|
ncRNA Gene |
Type: |
ncRNA_gene |
Organism: |
Mus pahari |
|
•
•
•
•
•
|
Publication |
First Author: |
Brown LJ |
Year: |
1980 |
Journal: |
Immunogenetics |
Title: |
Female expression of the H-2-linked sex-limited protein (Slp) due to non-H-2 genes. |
Volume: |
10 |
Issue: |
1 |
Pages: |
19-29 |
|
•
•
•
•
•
|
Publication |
First Author: |
Jiang PP |
Year: |
1996 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Localization of the mouse gene releasing sex-limited expression of Slp. |
Volume: |
93 |
Issue: |
2 |
Pages: |
913-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Van den Berg CW |
Year: |
1994 |
Journal: |
J Immunol Methods |
Title: |
Rapid, activity-guided isolation of sex-limited protein (Slp) from mouse serum by fractionated precipitation and high-performance liquid chromatography. |
Volume: |
169 |
Issue: |
2 |
Pages: |
251-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Passmore HC |
Year: |
1970 |
Journal: |
Biochem Genet |
Title: |
A sex-limited serum protein variant in the mouse: inheritance and association with the H-2 region. |
Volume: |
4 |
Issue: |
3 |
Pages: |
351-65 |
|
•
•
•
•
•
|
Publication |
First Author: |
Passmore HC |
Year: |
1971 |
Journal: |
Biochem Genet |
Title: |
A sex-limited serum protein variant in the mouse: hormonal control of phenotypic expression. |
Volume: |
5 |
Issue: |
2 |
Pages: |
201-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Huang ZM |
Year: |
1991 |
Journal: |
Immunogenetics |
Title: |
Differential expression of the five C4-related genes of H-2w7 mice. |
Volume: |
33 |
Issue: |
5-6 |
Pages: |
361-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ferreira A |
Year: |
1980 |
Journal: |
Immunogenetics |
Title: |
H-2-controlled polymorphism of the gamma chain of Slp (sex-limited protein). |
Volume: |
11 |
Issue: |
5 |
Pages: |
491-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Milstone DS |
Year: |
1992 |
Journal: |
J Biol Chem |
Title: |
An element regulating adrenal-specific steroid 21-hydroxylase expression is located within the slp gene. |
Volume: |
267 |
Issue: |
30 |
Pages: |
21924-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Robins DM |
Year: |
1992 |
Journal: |
Genetica |
Title: |
Retrotransposons and the evolution of mammalian gene expression. |
Volume: |
86 |
Issue: |
1-3 |
Pages: |
191-201 |
|
•
•
•
•
•
|
Publication |
First Author: |
Georgatsou E |
Year: |
1993 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Male-specific expression of mouse sex-limited protein requires growth hormone, not testosterone. |
Volume: |
90 |
Issue: |
8 |
Pages: |
3626-30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Yokomori N |
Year: |
1995 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Sexually dimorphic DNA demethylation in the promoter of the Slp (sex-limited protein) gene in mouse liver. |
Volume: |
92 |
Issue: |
5 |
Pages: |
1302-6 |
|
•
•
•
•
•
|
Publication |
First Author: |
Scarlett CO |
Year: |
1997 |
Journal: |
DNA Cell Biol |
Title: |
Involvement of an octamer-like sequence within a crucial region of the androgen-dependent Slp enhancer. |
Volume: |
16 |
Issue: |
1 |
Pages: |
45-57 |
|
•
•
•
•
•
|
Publication |
First Author: |
Varin-Blank N |
Year: |
1998 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Male-specific transcription initiation of the C4-Slp gene in mouse liver follows activation of STAT5. |
Volume: |
95 |
Issue: |
15 |
Pages: |
8750-5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Beurskens FJ |
Year: |
1999 |
Journal: |
Clin Exp Immunol |
Title: |
Sex-limited protein: in vitro and in vivo functions. |
Volume: |
116 |
Issue: |
3 |
Pages: |
395-400 |
|
•
•
•
•
•
|
Publication |
First Author: |
Matsumoto K |
Year: |
2000 |
Journal: |
GenBank Submission |
Title: |
Mus musculus Cyp21 and Slp genes for steroid 21-hydroxylase and sex-limited protein, complete and partial cds |
|
|
Pages: |
AB015623 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sim RB |
Year: |
2004 |
Journal: |
Biochem Soc Trans |
Title: |
Proteases of the complement system. |
Volume: |
32 |
Issue: |
Pt 1 |
Pages: |
21-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Astier A |
Year: |
2000 |
Journal: |
J Immunol |
Title: |
Cutting edge: CD46, a new costimulatory molecule for T cells, that induces p120CBL and LAT phosphorylation. |
Volume: |
164 |
Issue: |
12 |
Pages: |
6091-5 |
|
•
•
•
•
•
|
Publication |
First Author: |
Mizuno M |
Year: |
2004 |
Journal: |
Biol Reprod |
Title: |
Rat membrane cofactor protein (MCP; CD46) is expressed only in the acrosome of developing and mature spermatozoa and mediates binding to immobilized activated C3. |
Volume: |
71 |
Issue: |
4 |
Pages: |
1374-83 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry represents a group of membrane cofactor proteins (also known as CD46 or TLX). Human CD46 acts as a cofactor for complement factor I, a serine protease which protects autologous cells against complement-mediated injury by cleaving C3b and C4b deposited on host tissue []. Rat CD46 may be involved in the fusion of the spermatozoa with the oocyte during fertilization []. |
|
•
•
•
•
•
|
Publication |
First Author: |
The Jackson Laboratory Backcross DNA Panel Mapping Resource |
Year: |
1999 |
Journal: |
Database Release |
Title: |
JAX BSS Panel Mapping Data |
|
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Hu S |
Year: |
2023 |
Journal: |
Nat Commun |
Title: |
Helicobacter pylori initiates successful gastric colonization by utilizing L-lactate to promote complement resistance. |
Volume: |
14 |
Issue: |
1 |
Pages: |
1695 |
|
•
•
•
•
•
|
Publication |
First Author: |
Griffin P |
Year: |
2020 |
Journal: |
Elife |
Title: |
REV-ERBα mediates complement expression and diurnal regulation of microglial synaptic phagocytosis. |
Volume: |
9 |
|
|
|
•
•
•
•
•
|
Publication |
First Author: |
Marie JC |
Year: |
2002 |
Journal: |
Nat Immunol |
Title: |
Linking innate and acquired immunity: divergent role of CD46 cytoplasmic domains in T cell induced inflammation. |
Volume: |
3 |
Issue: |
7 |
Pages: |
659-66 |
|
•
•
•
•
•
|
Publication |
First Author: |
Roos MH |
Year: |
1982 |
Journal: |
Immunogenetics |
Title: |
Murine complement factor B (BF): sexual dimorphism and H-2-linked polymorphism. |
Volume: |
15 |
Issue: |
1 |
Pages: |
23-30 |
|
•
•
•
•
•
|
Publication |
First Author: |
Laich A |
Year: |
2001 |
Journal: |
Biochim Biophys Acta |
Title: |
Complement C4bC2 complex formation: an investigation by surface plasmon resonance. |
Volume: |
1544 |
Issue: |
1-2 |
Pages: |
96-112 |
|
•
•
•
•
•
|
Publication |
First Author: |
Rawal N |
Year: |
1998 |
Journal: |
J Biol Chem |
Title: |
C5 convertase of the alternative pathway of complement. Kinetic analysis of the free and surface-bound forms of the enzyme. |
Volume: |
273 |
Issue: |
27 |
Pages: |
16828-35 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kam CM |
Year: |
1987 |
Journal: |
J Biol Chem |
Title: |
Human complement proteins D, C2, and B. Active site mapping with peptide thioester substrates. |
Volume: |
262 |
Issue: |
8 |
Pages: |
3444-51 |
|
•
•
•
•
•
|
Publication |
First Author: |
Smith SA |
Year: |
2003 |
Journal: |
Biochim Biophys Acta |
Title: |
Mapping of regions within the vaccinia virus complement control protein involved in dose-dependent binding to key complement components and heparin using surface plasmon resonance. |
Volume: |
1650 |
Issue: |
1-2 |
Pages: |
30-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Paran N |
Year: |
2010 |
Journal: |
Expert Rev Vaccines |
Title: |
Complement-bound human antibodies to vaccinia virus B5 antigen protect mice from virus challenge. |
Volume: |
9 |
Issue: |
3 |
Pages: |
255-9 |
|
•
•
•
•
•
|
Publication |
First Author: |
Botto M |
Year: |
2009 |
Journal: |
Mol Immunol |
Title: |
Complement in human diseases: Lessons from complement deficiencies. |
Volume: |
46 |
Issue: |
14 |
Pages: |
2774-83 |
|
•
•
•
•
•
|
Publication |
First Author: |
Truedsson L |
Year: |
2015 |
Journal: |
Mol Immunol |
Title: |
Classical pathway deficiencies - A short analytical review. |
Volume: |
68 |
Issue: |
1 |
Pages: |
14-9 |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This entry represents complement component C2, a component of the classical and lectin activation pathway of complement. C2 is cleaved by C1s (classical) or mannan-binding lectin-associated serine peptidases (lectin) into C2a and C2b []. C2a is a serine endopeptidase from family S1 (chymotrypsin family; MEROPS identifier S01.194) which complexes with C4b to form the C3/C5 convertase []. The complex is stabilized by Mg2+[, ]. The C3/C5 convertase has trypsin-like specificity []. C2 deficiency is the commonest human complement deficiency, which can result in systemic lupus erythematosus-like immune complex diseases []. The C2 gene is part of the major histocompatabaility complex []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Family |
Description: |
This group represents complement control proteins, vaccinia virus C3-type. The vaccinia virus complement control protein C3 is involved in modulating the host inflammatory response by blocking both classical and alternative pathways of complement activity through its ability to bind host complement components C3b and C4b (complement 3b and 4b, respectively) []. Protein B5, another member of this group, binds complement components C3 and C1q []. By blocking complement activation at multiple sites, the complement control proteins can down-regulate pro-inflammatory chemotactic factors (C3a, C4a, and C5a), resulting in reduced cellular influx and inflammation.. |
|
•
•
•
•
•
|
Publication |
First Author: |
Minta JO |
Year: |
1996 |
Journal: |
Mol Immunol |
Title: |
cDNA cloning, sequencing and chromosomal assignment of the gene for mouse complement factor I (C3b/C4b inactivator): identification of a species specific divergent segment in factor I. |
Volume: |
33 |
Issue: |
1 |
Pages: |
101-12 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kristensen T |
Year: |
1986 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Murine protein H is comprised of 20 repeating units, 61 amino acids in length. |
Volume: |
83 |
Issue: |
11 |
Pages: |
3963-7 |
|
•
•
•
•
•
|
Publication |
First Author: |
Nakao A |
Year: |
2017 |
Journal: |
Mol Brain |
Title: |
Immature morphological properties in subcellular-scale structures in the dentate gyrus of Schnurri-2 knockout mice: a model for schizophrenia and intellectual disability. |
Volume: |
10 |
Issue: |
1 |
Pages: |
60 |
|
•
•
•
•
•
|
Publication |
First Author: |
Kõks S |
Year: |
2011 |
Journal: |
Physiol Genomics |
Title: |
Hypothalamic gene expression profile indicates a reduction in G protein signaling in the Wfs1 mutant mice. |
Volume: |
43 |
Issue: |
24 |
Pages: |
1351-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Liszewski MK |
Year: |
2000 |
Journal: |
J Biol Chem |
Title: |
Dissecting sites important for complement regulatory activity in membrane cofactor protein (MCP; CD46). |
Volume: |
275 |
Issue: |
48 |
Pages: |
37692-701 |
|
•
•
•
•
•
|
Publication |
First Author: |
Sargent CA |
Year: |
1994 |
Journal: |
Hum Mol Genet |
Title: |
Characterisation of the novel gene G11 lying adjacent to the complement C4A gene in the human major histocompatibility complex. |
Volume: |
3 |
Issue: |
3 |
Pages: |
481-8 |
|
•
•
•
•
•
|
Publication |
First Author: |
Hasan M |
Year: |
2017 |
Journal: |
Neuroscience |
Title: |
Novel genes in brain tissues of EAE-induced normal and obese mice: Upregulation of metal ion-binding protein genes in obese-EAE mice. |
Volume: |
343 |
|
Pages: |
322-336 |
|
•
•
•
•
•
|
Publication |
First Author: |
Zarantonello A |
Year: |
2020 |
Journal: |
J Immunol |
Title: |
An Ultrahigh-Affinity Complement C4b-Specific Nanobody Inhibits In Vivo Assembly of the Classical Pathway Proconvertase. |
Volume: |
205 |
Issue: |
6 |
Pages: |
1678-1694 |
|
•
•
•
•
•
|
Publication |
First Author: |
Munkhzul C |
Year: |
2023 |
Journal: |
PLoS One |
Title: |
The microRNA-mediated gene regulatory network in the hippocampus and hypothalamus of the aging mouse. |
Volume: |
18 |
Issue: |
11 |
Pages: |
e0291943 |
|
•
•
•
•
•
|
Publication |
First Author: |
Ogata RT |
Year: |
1991 |
Journal: |
J Immunol |
Title: |
The murine Slp gene. Additional evidence that sex-limited protein has no biologic function. |
Volume: |
147 |
Issue: |
8 |
Pages: |
2756-63 |
|
•
•
•
•
•
|
Publication |
First Author: |
Amor M |
Year: |
1985 |
Journal: |
Proc Natl Acad Sci U S A |
Title: |
Liver mRNA probes disclose two cytochrome P-450 genes duplicated in tandem with the complement C4 loci of the mouse H-2S region. |
Volume: |
82 |
Issue: |
13 |
Pages: |
4453-7 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
365
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
300
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
365
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Publication |
First Author: |
Aw E |
Year: |
2020 |
Journal: |
J Neuroinflammation |
Title: |
Microglial responses to peripheral type 1 interferon. |
Volume: |
17 |
Issue: |
1 |
Pages: |
340 |
|
•
•
•
•
•
|
Publication |
First Author: |
Basak JM |
Year: |
2021 |
Journal: |
Neurobiol Dis |
Title: |
Bacterial sepsis increases hippocampal fibrillar amyloid plaque load and neuroinflammation in a mouse model of Alzheimer's disease. |
Volume: |
152 |
|
Pages: |
105292 |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
177
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
51
 |
Fragment?: |
true |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
The extracellular sushi domain is characterised by a consensus sequence spanning ~60 residues containing four invariant cysteine residues forming two disulfide-bridges (I-III and II-IV), a highly conserved tryptophan, and conserved glycine, proline, and hydrophobic residues []. Sushi domains are known to be involved in many recognition processes, including the binding of several complement factors to fragments C3b and C4b []. The sushi domain is also known as the complement control protein (CCP) module or the short consensus repeat (SCR). Several structure of the sushi domain have been solved (see for example ) []. The sushi domain folds into a small and compact hydrophobic core enveloped by six β-strands and stabilised by two disulfide bridges. The relative structural orientation of the β-2 and β-4 strands is shared by all the sushi structures, whereas the topology of the other strands relative to this central conserved core is variable, especially at the regions that form the interfaces with the preceding and following domains []. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Domain |
Description: |
This domain is found in complement component proteins, complement component factor 1 and agrin. Complement components C5b, C6, C7 C8 and C9 are the constituents of the membrane attack complex (MAC) that plays a key role in the innate and adaptive immune response by forming pores in the plasma membrane of target cells. Its assembly is initiated by protelytic cleavage of C5 into C5a and C5b. C5b binds sequentially C6, C7, C8 and multiple copies of the pore-forming subunit C9. Factor I is responsible for cleaving alpha chains of C4B and C3B in the presence of the cofactors C4-binding protein and factor H respectively. Agrin is a component of the basal lamina that causes the aggregation of acetylcholine receptors and acetylcholine-esterase on the surface of muscle fibres of the neuromuscular junction. |
|
•
•
•
•
•
|
Protein Domain |
Type: |
Homologous_superfamily |
Description: |
The extracellular sushi domain is characterised by a consensus sequence spanning ~60 residues containing four invariant cysteine residues forming two disulfide-bridges (I-III and II-IV), a highly conserved tryptophan, and conserved glycine, proline, and hydrophobic residues []. Sushi domains are known to be involved in many recognition processes, including the binding of several complement factors to fragments C3b and C4b []. The sushi domain is also known as the complement control protein (CCP) module or the short consensus repeat (SCR). Several structure of the sushi domain have been solved (see for example ) []. The sushi domain folds into a small and compact hydrophobic core enveloped by six β-strands and stabilised by two disulfide bridges. The relative structural orientation of the β-2 and β-4 strands is shared by all the sushi structures, whereas the topology of the other strands relative to this central conserved core is variable, especially at the regions that form the interfaces with the preceding and following domains []. |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1025
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
1234
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
483
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
407
 |
Fragment?: |
false |
|
•
•
•
•
•
|
Protein |
Organism: |
Mus musculus/domesticus |
Length: |
390
 |
Fragment?: |
false |
|
•
•
•
•
•
|